BLASTX nr result

ID: Coptis25_contig00017657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017657
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV56698.1| AAA-family ATPase [Phaseolus vulgaris]                 120   2e-25
emb|CBI32241.3| unnamed protein product [Vitis vinifera]              118   4e-25
emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]   118   4e-25
ref|XP_003624945.1| Peroxisomal biogenesis factor [Medicago trun...   114   8e-24
gb|ABN08542.1| AAA ATPase, central region; L-lactate dehydrogena...   114   8e-24

>gb|ADV56698.1| AAA-family ATPase [Phaseolus vulgaris]
          Length = 949

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/76 (73%), Positives = 69/76 (90%)
 Frame = -2

Query: 228  TGADMYALCADAWFCAAKRKVSSLHSDSNGTDDQPDSVIVEYDDFVKVLEDLSPSLSVAE 49
            TGADMYALCADAWF AAKRKV S + +S+  D++ DSV+V+YDDFV+VLE+LSPSLS+AE
Sbjct: 874  TGADMYALCADAWFHAAKRKVLSANPESSNKDNEADSVVVQYDDFVQVLEELSPSLSIAE 933

Query: 48   LKKYEQLRDQFDGTTK 1
            LKKYEQLRDQF+GT++
Sbjct: 934  LKKYEQLRDQFEGTSR 949


>emb|CBI32241.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/76 (76%), Positives = 66/76 (86%)
 Frame = -2

Query: 228  TGADMYALCADAWFCAAKRKVSSLHSDSNGTDDQPDSVIVEYDDFVKVLEDLSPSLSVAE 49
            TGADMYALCADAWF AAKRKV S  SDS+  ++Q DSVI+ YDDFVKVL DL+PSLSVAE
Sbjct: 863  TGADMYALCADAWFQAAKRKVLSPPSDSSSMENQADSVIIRYDDFVKVLRDLTPSLSVAE 922

Query: 48   LKKYEQLRDQFDGTTK 1
            LKKYE+LRDQF+G +K
Sbjct: 923  LKKYERLRDQFEGASK 938


>emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]
          Length = 1241

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/76 (76%), Positives = 66/76 (86%)
 Frame = -2

Query: 228  TGADMYALCADAWFCAAKRKVSSLHSDSNGTDDQPDSVIVEYDDFVKVLEDLSPSLSVAE 49
            TGADMYALCADAWF AAKRKV S  SDS+  ++Q DSVI+ YDDFVKVL DL+PSLSVAE
Sbjct: 1166 TGADMYALCADAWFQAAKRKVLSPPSDSSSMENQADSVIIRYDDFVKVLRDLTPSLSVAE 1225

Query: 48   LKKYEQLRDQFDGTTK 1
            LKKYE+LRDQF+G +K
Sbjct: 1226 LKKYERLRDQFEGASK 1241


>ref|XP_003624945.1| Peroxisomal biogenesis factor [Medicago truncatula]
            gi|355499960|gb|AES81163.1| Peroxisomal biogenesis factor
            [Medicago truncatula]
          Length = 952

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/76 (69%), Positives = 65/76 (85%)
 Frame = -2

Query: 228  TGADMYALCADAWFCAAKRKVSSLHSDSNGTDDQPDSVIVEYDDFVKVLEDLSPSLSVAE 49
            TGADMYALCADAWF AAKR+V +   +S+  D+  DS++VEYDDFV+VLE+L PSLS+AE
Sbjct: 877  TGADMYALCADAWFLAAKRRVLNAEPESSNPDNDADSIVVEYDDFVQVLEELQPSLSMAE 936

Query: 48   LKKYEQLRDQFDGTTK 1
            LKKYE LRDQF+GT+K
Sbjct: 937  LKKYELLRDQFEGTSK 952


>gb|ABN08542.1| AAA ATPase, central region; L-lactate dehydrogenase [Medicago
            truncatula]
          Length = 924

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/76 (69%), Positives = 65/76 (85%)
 Frame = -2

Query: 228  TGADMYALCADAWFCAAKRKVSSLHSDSNGTDDQPDSVIVEYDDFVKVLEDLSPSLSVAE 49
            TGADMYALCADAWF AAKR+V +   +S+  D+  DS++VEYDDFV+VLE+L PSLS+AE
Sbjct: 849  TGADMYALCADAWFLAAKRRVLNAEPESSNPDNDADSIVVEYDDFVQVLEELQPSLSMAE 908

Query: 48   LKKYEQLRDQFDGTTK 1
            LKKYE LRDQF+GT+K
Sbjct: 909  LKKYELLRDQFEGTSK 924


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