BLASTX nr result

ID: Coptis25_contig00015050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015050
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269044.2| PREDICTED: putative disease resistance prote...   111   7e-23
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...   110   2e-22
ref|XP_002268266.2| PREDICTED: putative disease resistance prote...   109   3e-22
ref|XP_002268547.2| PREDICTED: putative disease resistance prote...   108   3e-22
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...   108   4e-22

>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score =  111 bits (277), Expect = 7e-23
 Identities = 64/137 (46%), Positives = 81/137 (59%)
 Frame = -3

Query: 412 QLSLVQSHGHEEPRQFTSSVVDVSEIFGRDQDKQEILNKLLCENSQQETRARIPILSIVG 233
           Q + + S   E  R  T+S +D+ E++GRD DK  IL  LL E  Q ET +   I+SIVG
Sbjct: 145 QFNFISSLSEEPQRFITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETESGPHIISIVG 203

Query: 232 TAGFGKTTLAQLVYNEETIATTFKLKIWVCVSEPFDLERIAREIIAQATREKLSKNVVGW 53
           T G GKTTLAQL YN   +   F  +IWVCVS+PFD  RI REI+    RE  S N+   
Sbjct: 204 TGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQRE--SPNLHSL 261

Query: 52  ELLHQHLCNSVKGKRFL 2
           E L Q +   + GK+FL
Sbjct: 262 EALQQKIQTCIAGKKFL 278


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/127 (44%), Positives = 86/127 (67%)
 Frame = -3

Query: 382 EEPRQFTSSVVDVSEIFGRDQDKQEILNKLLCENSQQETRARIPILSIVGTAGFGKTTLA 203
           +EP + T+S VDVS + GR+ +K+ +++KLLC++SQ+  +  + ++SIVG  G GKTTLA
Sbjct: 183 KEPDRQTTSFVDVSRVHGREDEKKNVISKLLCDSSQEGRK--VQVISIVGMGGLGKTTLA 240

Query: 202 QLVYNEETIATTFKLKIWVCVSEPFDLERIAREIIAQATREKLSKNVVGWELLHQHLCNS 23
           QL YN + I T F+ +IWVCVS PFD   +A+ II   +    + N+V  E L + +  S
Sbjct: 241 QLAYNADEIKTYFEKRIWVCVSHPFDENTVAKAIIEDLS--GAAPNLVELEPLCKRISES 298

Query: 22  VKGKRFL 2
           ++GK+FL
Sbjct: 299 IEGKKFL 305


>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 932

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
 Frame = -3

Query: 394 SHGHEEP-RQFTSSVVDVSEIFGRDQDKQEILNKLLCENSQQETRARIPILSIVGTAGFG 218
           S G +EP R  T+S +DVSE++GRD D   IL +LL EN ++  ++R+ I++IVGT G G
Sbjct: 150 SSGTQEPQRLITTSAIDVSEVYGRDTDVNAILGRLLGENDEE--KSRLYIIAIVGTGGMG 207

Query: 217 KTTLAQLVYNEETIATTFKLKIWVCVSEPFDLERIAREIIAQATREKLSKNVVGWELLHQ 38
           KTTLAQL YN   +   F  +IWVCVS+PFD  R+ R I+   T +K   N+   E + Q
Sbjct: 208 KTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRVCRAIV--ETLQKKPCNLHDLEAVQQ 265

Query: 37  HLCNSVKGKRFL 2
            +   + GK+FL
Sbjct: 266 EIQTCIAGKKFL 277


>ref|XP_002268547.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 880

 Score =  108 bits (271), Expect = 3e-22
 Identities = 63/137 (45%), Positives = 81/137 (59%)
 Frame = -3

Query: 412 QLSLVQSHGHEEPRQFTSSVVDVSEIFGRDQDKQEILNKLLCENSQQETRARIPILSIVG 233
           Q + + S   E  R  T+S +D+ E++GRD DK  IL  LL E  Q ET++   I+SIVG
Sbjct: 144 QFNFISSLSEEPQRFITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVG 202

Query: 232 TAGFGKTTLAQLVYNEETIATTFKLKIWVCVSEPFDLERIAREIIAQATREKLSKNVVGW 53
           T G GKTTLAQL YN   +   F  +IWVCVS+PFD  RI REI+     E  S N+   
Sbjct: 203 TGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQGE--SPNLHSL 260

Query: 52  ELLHQHLCNSVKGKRFL 2
           E L Q +   + GK+FL
Sbjct: 261 EALQQKIQTCIAGKKFL 277


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score =  108 bits (270), Expect = 4e-22
 Identities = 63/137 (45%), Positives = 81/137 (59%)
 Frame = -3

Query: 412 QLSLVQSHGHEEPRQFTSSVVDVSEIFGRDQDKQEILNKLLCENSQQETRARIPILSIVG 233
           Q + + S   E  R  T+S +D+ E++GRD DK  IL  LL E  Q ET++   I+SIVG
Sbjct: 145 QFNFISSLSEEPQRFITTSQLDIPEVYGRDMDKNTILGHLLGETCQ-ETKSGPYIISIVG 203

Query: 232 TAGFGKTTLAQLVYNEETIATTFKLKIWVCVSEPFDLERIAREIIAQATREKLSKNVVGW 53
           T G GKTTLAQL YN   +   F  +IWVCVS+PFD  RI REI+     E  S N+   
Sbjct: 204 TGGMGKTTLAQLAYNHPEVKAHFDERIWVCVSDPFDPIRIFREIVEILQGE--SPNLHSL 261

Query: 52  ELLHQHLCNSVKGKRFL 2
           E L Q +   + GK+FL
Sbjct: 262 EALQQKIQTYIAGKKFL 278


Top