BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014865
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323183.1| f-box family protein [Populus trichocarpa] g...    99   4e-19
emb|CBI16980.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258...    95   7e-18
ref|XP_002264264.2| PREDICTED: F-box/LRR-repeat protein At3g4888...    92   3e-17
emb|CBI39052.3| unnamed protein product [Vitis vinifera]               89   4e-16

>ref|XP_002323183.1| f-box family protein [Populus trichocarpa]
           gi|222867813|gb|EEF04944.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/91 (54%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = -3

Query: 407 SNFVGLFINSG-IDIEEATSIVTNLPKIKYLSLRNCSVPRECLIQILNGCRDLVLFDVRD 231
           + F GL ++S  I  EEA++IVTNLP IKYL LR   +  E L+ IL GC++LV  DVRD
Sbjct: 206 NKFSGLCVSSATIQEEEASAIVTNLPNIKYLILRGAWIDFEDLVIILQGCKNLVHLDVRD 265

Query: 230 CIGFDEDEEEILKIASHIKNFRLQGSMLYDY 138
           C+GFD D+E++L++AS+IK F+ +GSML DY
Sbjct: 266 CLGFDFDDEKVLELASNIKTFKCEGSMLVDY 296


>emb|CBI16980.3| unnamed protein product [Vitis vinifera]
          Length = 623

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
 Frame = -3

Query: 365 EEATSIVTNLPKIKYLSLRNCSVPRECLIQILNGCRDLVLFDVRDCIGFDEDEEEILKIA 186
           +EA++IVT+LP ++YL L   S+ +E L+ IL GC+ L+  DVRDC GFDED+ EILK+A
Sbjct: 523 KEASAIVTSLPNLRYLVLNGASIEQESLVMILQGCKQLIEIDVRDCDGFDEDDAEILKLA 582

Query: 185 SHIKNFRLQGSMLY---DYYYETGADYEY 108
           SHI +F  +GS LY   D Y  T  D+ Y
Sbjct: 583 SHIPSFMCKGSYLYDPFDDYEHTQIDHNY 611



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/70 (50%), Positives = 52/70 (74%)
 Frame = -3

Query: 362 EATSIVTNLPKIKYLSLRNCSVPRECLIQILNGCRDLVLFDVRDCIGFDEDEEEILKIAS 183
           EA++IVT LP ++YL L+  ++ ++ ++ IL GC+ LV  DVR C GFDED+ EIL++AS
Sbjct: 105 EASAIVTLLPNLRYLVLKGATIRQKRVVMILQGCKQLVHLDVRGCTGFDEDDAEILELAS 164

Query: 182 HIKNFRLQGS 153
           HI +F  +GS
Sbjct: 165 HIPSFMCEGS 174


>ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258440 [Vitis vinifera]
          Length = 446

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
 Frame = -3

Query: 365 EEATSIVTNLPKIKYLSLRNCSVPRECLIQILNGCRDLVLFDVRDCIGFDEDEEEILKIA 186
           +EA++IVT+LP ++YL L   S+ +E L+ IL GC+ L+  DVRDC GFDED+ EILK+A
Sbjct: 346 KEASAIVTSLPNLRYLVLNGASIEQESLVMILQGCKQLIEIDVRDCDGFDEDDAEILKLA 405

Query: 185 SHIKNFRLQGSMLY---DYYYETGADYEY 108
           SHI +F  +GS LY   D Y  T  D+ Y
Sbjct: 406 SHIPSFMCKGSYLYDPFDDYEHTQIDHNY 434


>ref|XP_002264264.2| PREDICTED: F-box/LRR-repeat protein At3g48880-like [Vitis vinifera]
          Length = 275

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/107 (43%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
 Frame = -3

Query: 407 SNFVGLFINSGIDI--EEATSIVTNLPKIKYLSLRNCSVPRECLIQILNGCRDLVLFDVR 234
           +NF+ LF   GI +  +E T+++T+LP +KYL L+  ++ ++ L+ IL GC++L L DVR
Sbjct: 170 NNFIKLFA-PGIYVGKDEVTAMITSLPNLKYLDLKGSTIEQKNLVMILQGCKELQLLDVR 228

Query: 233 DCIGFDEDEEEILKIASHIKNFRLQGSML--YDYYYETGADYEYFTG 99
           DCIGF E   EIL++ASHI  F  +GS+   YD Y +   D +Y++G
Sbjct: 229 DCIGFWEGNAEILELASHIPKFMCEGSIYEEYDTYIDGDVDSDYYSG 275


>emb|CBI39052.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/91 (47%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = -3

Query: 407 SNFVGLFINS-GIDIEEATSIVTNLPKIKYLSLRNCSVPRECLIQILNGCRDLVLFDVRD 231
           +NF+ LF     +  +EAT+IVT+LP +KYL L+  ++  E L+ +L GC+ L+  DVR 
Sbjct: 98  NNFIMLFAPQIYVGKDEATAIVTSLPNLKYLVLKGSTIEWENLVMVLQGCKKLLRLDVRK 157

Query: 230 CIGFDEDEEEILKIASHIKNFRLQGSMLYDY 138
           CIGF++++ EIL +ASHI  F  +GS+LYDY
Sbjct: 158 CIGFEKNDAEILALASHIPTFMCKGSILYDY 188