BLASTX nr result

ID: Coptis25_contig00014832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014832
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600351.1| Cellulose synthase-like protein E1 [Medicago...   120   9e-26
gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]    117   7e-25
ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_003530803.1| PREDICTED: cellulose synthase-like protein E...   117   1e-24
ref|XP_003600349.1| Cellulose synthase-like protein E1 [Medicago...   116   2e-24

>ref|XP_003600351.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489399|gb|AES70602.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 736

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/96 (59%), Positives = 74/96 (77%), Gaps = 5/96 (5%)
 Frame = +3

Query: 3   TNNDTYGGSLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFV----K 170
           T ND YGGSL+V  ++EF GLDGFGGPLYIGTGCFHRR+ LCGRKYS + K+++     +
Sbjct: 341 TKNDIYGGSLLVAYEVEFYGLDGFGGPLYIGTGCFHRRDVLCGRKYSDQCKIDWKNVNDE 400

Query: 171 SIDNRVQ-ESINELEEQTKILADCTSEKGTEWGKEM 275
           +ID+ ++  S+ ELEE++K LA CT E+ T WGKEM
Sbjct: 401 NIDHMIKVASLQELEEKSKTLASCTYEENTSWGKEM 436


>gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 736

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = +3

Query: 3   TNNDTYGGSLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFVKSIDN 182
           T ND Y  SL V   +EF G DG+GGPLY+GTGCFHRR+TLCGR++S++ K+E+ K  D+
Sbjct: 348 TKNDLYSSSLRVITNVEFHGTDGYGGPLYVGTGCFHRRDTLCGREFSQDSKIEWKKHNDH 407

Query: 183 RVQESINELEEQTKILADCTSEKGTEWGKE 272
           R Q+S++EL E+TK LA CT E+ T+WG E
Sbjct: 408 RRQQSVHELVEETKTLASCTYEQNTKWGNE 437


>ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|222847641|gb|EEE85188.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  117 bits (294), Expect = 7e-25
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = +3

Query: 3   TNNDTYGGSLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFVKSIDN 182
           T ND Y  SL V   +EF G DG+GGPLY+GTGCFHRR+TLCGR++S++ K+E+ K  D+
Sbjct: 348 TKNDLYSSSLRVITNVEFHGTDGYGGPLYVGTGCFHRRDTLCGREFSQDSKIEWKKHNDH 407

Query: 183 RVQESINELEEQTKILADCTSEKGTEWGKE 272
           R Q+S++EL E+TK LA CT E+ T+WG E
Sbjct: 408 RRQQSVHELVEETKTLASCTYEQNTKWGNE 437


>ref|XP_003530803.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max]
          Length = 934

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/93 (59%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   TNNDTYGGSLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEF--VKSI 176
           TNND YGG+L V  ++EF GLDG GGP YIGTGCFHRRE LCGRK++ +YK ++   K+I
Sbjct: 346 TNNDLYGGALRVIYEVEFHGLDGLGGPFYIGTGCFHRREILCGRKFNDQYKNDWKEYKNI 405

Query: 177 DNRVQESINELEEQTKILADCTSEKGTEWGKEM 275
           D+  + S++ELEE++K LA CT E+ T WGK+M
Sbjct: 406 DHMKEGSLHELEEKSKALASCTYEENTLWGKKM 438


>ref|XP_003600349.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489397|gb|AES70600.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 733

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/96 (55%), Positives = 72/96 (75%), Gaps = 5/96 (5%)
 Frame = +3

Query: 3   TNNDTYGGSLIVGMKMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSKEYKVEFV----K 170
           T ND YGGS  +  +++  G DGFGGP+YIGTGCFHRR+ LCGRKYS +YK+++     +
Sbjct: 341 TKNDIYGGSFRIPHEVDLHGFDGFGGPMYIGTGCFHRRDALCGRKYSDQYKIDWKNANDE 400

Query: 171 SIDNRVQE-SINELEEQTKILADCTSEKGTEWGKEM 275
           +ID+ ++E S+ ELEE++K LA CT E+ T WGKEM
Sbjct: 401 NIDHMIKEVSLQELEEKSKTLASCTYEENTSWGKEM 436


Top