BLASTX nr result
ID: Coptis25_contig00014587
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014587
(1754 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated f... 490 e-136
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f... 483 e-134
ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated f... 471 e-130
ref|XP_002523964.1| TATA-binding protein-associated factor MOT1,... 470 e-130
ref|XP_002319739.1| chromatin remodeling complex subunit [Populu... 448 e-123
>ref|XP_002275285.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 1
[Vitis vinifera]
Length = 2052
Score = 490 bits (1261), Expect = e-136
Identities = 258/441 (58%), Positives = 321/441 (72%)
Frame = -2
Query: 1327 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 1148
M+ QSSRLHRLLTLLDTGSTQATR AA QIG IAK+HPQDL+S L+KVS YLRSKNWDT
Sbjct: 1 MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60
Query: 1147 RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 968
RV A+NV H+SL ELFA V + AGISG EDV+ +W + HP ++G F
Sbjct: 61 RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDVV-AWPDYHPKIMAGSPF 119
Query: 967 RSFDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVND 788
RSFD++KVLEFGALLASGGQEYD+ASD +K P +RLARQKQNLRRRLGLD+CEQFMDVND
Sbjct: 120 RSFDINKVLEFGALLASGGQEYDIASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVND 179
Query: 787 VIKDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKA 608
+I+DEDL+V+KF+ NG+ +R Q + IQ+LVAN+VPT +SKRPSARELNLLKRKA
Sbjct: 180 MIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRKA 239
Query: 607 KINAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDPISSNKXXXXXXXXXXXXXXDGEGQW 428
KIN+KDQTK W + ++ ++ L PK +CP+ + S+K DG+G+W
Sbjct: 240 KINSKDQTKGWSEDGDT----AEVLTTPKESCPESLHSDKVFMDPIVDEDNFDHDGDGRW 295
Query: 427 PFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGVFTPDLSSKSAHSDKTEVKQ 248
PF +FVEQL+LDMFDP WE+RHGS+MALREI+TH G S+GV PDLSS +A + + K
Sbjct: 296 PFHSFVEQLLLDMFDPVWEIRHGSVMALREILTHQGASAGVLMPDLSSGAASFIELKEKD 355
Query: 247 ELTTLKRKMELDLNVQVPGEETEPNWKKLKSEDGICSTIYTMTSVDEGANPGTCIKMEDG 68
TLKR+ E+DLN+QVP +E+EPN K+LKSED + T+ S AN I++ED
Sbjct: 356 NSNTLKREREIDLNMQVPADESEPNLKRLKSEDLSSPLMDTVGSAGNHANLDIRIRVEDS 415
Query: 67 GCDLIPEQVSDVLKVESAKVE 5
GC+L Q + L V S KV+
Sbjct: 416 GCNLPAWQANGELDVSSVKVK 436
>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
[Vitis vinifera]
Length = 2060
Score = 483 bits (1242), Expect = e-134
Identities = 258/449 (57%), Positives = 321/449 (71%), Gaps = 8/449 (1%)
Frame = -2
Query: 1327 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 1148
M+ QSSRLHRLLTLLDTGSTQATR AA QIG IAK+HPQDL+S L+KVS YLRSKNWDT
Sbjct: 1 MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60
Query: 1147 RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 968
RV A+NV H+SL ELFA V + AGISG EDV+ +W + HP ++G F
Sbjct: 61 RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDVV-AWPDYHPKIMAGSPF 119
Query: 967 RSFDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVND 788
RSFD++KVLEFGALLASGGQEYD+ASD +K P +RLARQKQNLRRRLGLD+CEQFMDVND
Sbjct: 120 RSFDINKVLEFGALLASGGQEYDIASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVND 179
Query: 787 VIKDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKA 608
+I+DEDL+V+KF+ NG+ +R Q + IQ+LVAN+VPT +SKRPSARELNLLKRKA
Sbjct: 180 MIRDEDLIVHKFNPQGNGIDNRFNNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRKA 239
Query: 607 KINAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDPISSNK--------XXXXXXXXXXXX 452
KIN+KDQTK W + ++ ++ L PK +CP+ + S+K
Sbjct: 240 KINSKDQTKGWSEDGDT----AEVLTTPKESCPESLHSDKVFDSYSLQVFMDPIVDEDNF 295
Query: 451 XXDGEGQWPFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGVFTPDLSSKSAH 272
DG+G+WPF +FVEQL+LDMFDP WE+RHGS+MALREI+TH G S+GV PDLSS +A
Sbjct: 296 DHDGDGRWPFHSFVEQLLLDMFDPVWEIRHGSVMALREILTHQGASAGVLMPDLSSGAAS 355
Query: 271 SDKTEVKQELTTLKRKMELDLNVQVPGEETEPNWKKLKSEDGICSTIYTMTSVDEGANPG 92
+ + K TLKR+ E+DLN+QVP +E+EPN K+LKSED + T+ S AN
Sbjct: 356 FIELKEKDNSNTLKREREIDLNMQVPADESEPNLKRLKSEDLSSPLMDTVGSAGNHANLD 415
Query: 91 TCIKMEDGGCDLIPEQVSDVLKVESAKVE 5
I++ED GC+L Q + L V S KV+
Sbjct: 416 IRIRVEDSGCNLPAWQANGELDVSSVKVK 444
>ref|XP_003633863.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 2
[Vitis vinifera]
Length = 2089
Score = 471 bits (1213), Expect = e-130
Identities = 258/478 (53%), Positives = 321/478 (67%), Gaps = 37/478 (7%)
Frame = -2
Query: 1327 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 1148
M+ QSSRLHRLLTLLDTGSTQATR AA QIG IAK+HPQDL+S L+KVS YLRSKNWDT
Sbjct: 1 MSHQSSRLHRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLNSLLRKVSQYLRSKNWDT 60
Query: 1147 RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 968
RV A+NV H+SL ELFA V + AGISG EDV+ +W + HP ++G F
Sbjct: 61 RVAAAHAIGAIAENVKHSSLSELFACVGKRMSEAGISGEVEDVV-AWPDYHPKIMAGSPF 119
Query: 967 RSFDLSKVLEFGALLASGGQ-------------------------------------EYD 899
RSFD++KVLEFGALLASGGQ EYD
Sbjct: 120 RSFDINKVLEFGALLASGGQVMLFFFLTKALECQSIWVQPRKCFPEIKLWSLEKFYIEYD 179
Query: 898 VASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVNDVIKDEDLLVNKFSSHENGVGHRS 719
+ASD +K P +RLARQKQNLRRRLGLD+CEQFMDVND+I+DEDL+V+KF+ NG+ +R
Sbjct: 180 IASDNTKNPRDRLARQKQNLRRRLGLDMCEQFMDVNDMIRDEDLIVHKFNPQGNGIDNRF 239
Query: 718 YIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKAKINAKDQTKSWCDAAESEAPHSQ 539
Q + IQ+LVAN+VPT +SKRPSARELNLLKRKAKIN+KDQTK W + ++ ++
Sbjct: 240 NNSQSVHSIQRLVANMVPTIISKRPSARELNLLKRKAKINSKDQTKGWSEDGDT----AE 295
Query: 538 SLVLPKVTCPDPISSNKXXXXXXXXXXXXXXDGEGQWPFQNFVEQLILDMFDPNWEVRHG 359
L PK +CP+ + S+K DG+G+WPF +FVEQL+LDMFDP WE+RHG
Sbjct: 296 VLTTPKESCPESLHSDKVFMDPIVDEDNFDHDGDGRWPFHSFVEQLLLDMFDPVWEIRHG 355
Query: 358 SMMALREIITHHGGSSGVFTPDLSSKSAHSDKTEVKQELTTLKRKMELDLNVQVPGEETE 179
S+MALREI+TH G S+GV PDLSS +A + + K TLKR+ E+DLN+QVP +E+E
Sbjct: 356 SVMALREILTHQGASAGVLMPDLSSGAASFIELKEKDNSNTLKREREIDLNMQVPADESE 415
Query: 178 PNWKKLKSEDGICSTIYTMTSVDEGANPGTCIKMEDGGCDLIPEQVSDVLKVESAKVE 5
PN K+LKSED + T+ S AN I++ED GC+L Q + L V S KV+
Sbjct: 416 PNLKRLKSEDLSSPLMDTVGSAGNHANLDIRIRVEDSGCNLPAWQANGELDVSSVKVK 473
>ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus
communis] gi|223536691|gb|EEF38332.1| TATA-binding
protein-associated factor MOT1, putative [Ricinus
communis]
Length = 1920
Score = 470 bits (1209), Expect = e-130
Identities = 259/424 (61%), Positives = 308/424 (72%)
Frame = -2
Query: 1327 MAQQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDT 1148
MAQQSSRLHRLLTLLDTGSTQATRF AA QIG IAK+HPQDLSS LKKVS YLRSKNWDT
Sbjct: 1 MAQQSSRLHRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLSSLLKKVSQYLRSKNWDT 60
Query: 1147 RVXXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSF 968
RV AQNV HTSL ELFASVEA++ G+SG ED++ +W + +S SF
Sbjct: 61 RVAAAHAIGAIAQNVKHTSLAELFASVEAKMSEVGMSGVVEDLV-AWPDFLSKIISSGSF 119
Query: 967 RSFDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVND 788
RSF+++KVLEFGALLAS GQEYD+A+D SK P ERLARQKQNLRRRLGLDVCEQFMDVND
Sbjct: 120 RSFEINKVLEFGALLASRGQEYDIANDNSKNPRERLARQKQNLRRRLGLDVCEQFMDVND 179
Query: 787 VIKDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKA 608
VIKDEDLLV K S NG+G+R Y+ + IQQLVA++VPT +S+RPSARELNLLKRKA
Sbjct: 180 VIKDEDLLVQKLHSQGNGLGNRFYMPPSVHNIQQLVASMVPTVVSRRPSARELNLLKRKA 239
Query: 607 KINAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDPISSNKXXXXXXXXXXXXXXDGEGQW 428
KIN+KDQTK W + ++E SQS PK + D +S+K DG+G+W
Sbjct: 240 KINSKDQTKGWSEDGDAEMSFSQS-TTPKASNQDSFNSSK----VDADEDSFEHDGDGKW 294
Query: 427 PFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGVFTPDLSSKSAHSDKTEVKQ 248
PF+ FVEQL+LDMFDP WEVRHGS+MALREI+THHGGS+GVF PDLS A D+ +
Sbjct: 295 PFRGFVEQLMLDMFDPVWEVRHGSVMALREILTHHGGSAGVFMPDLSLDGA-LDELKYLD 353
Query: 247 ELTTLKRKMELDLNVQVPGEETEPNWKKLKSEDGICSTIYTMTSVDEGANPGTCIKMEDG 68
+TLKR+ E DLN+QV +E EP+ K+ K E+ T+ S N +K+ED
Sbjct: 354 YSSTLKREREFDLNMQVSIDELEPHLKRPKFEEASSLLADTVLSTGCVENSDISVKVEDN 413
Query: 67 GCDL 56
GC +
Sbjct: 414 GCTM 417
>ref|XP_002319739.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222858115|gb|EEE95662.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2045
Score = 448 bits (1153), Expect = e-123
Identities = 248/439 (56%), Positives = 300/439 (68%), Gaps = 4/439 (0%)
Frame = -2
Query: 1321 QQSSRLHRLLTLLDTGSTQATRFEAANQIGAIAKAHPQDLSSFLKKVSVYLRSKNWDTRV 1142
QQSSRL+RLLTLLDTGSTQATR AA QIG IAK+HPQDL S LKKVS L SKNWDTRV
Sbjct: 4 QQSSRLNRLLTLLDTGSTQATRLTAAKQIGDIAKSHPQDLHSLLKKVSQNLHSKNWDTRV 63
Query: 1141 XXXXXXXXXAQNVVHTSLQELFASVEAELLAAGISGNGEDVIMSWTNSHPDFVSGLSFRS 962
AQNV HTSL ELFASVE ++ G+SG+ ED++ + N H +S FRS
Sbjct: 64 AAAHAIGAIAQNVKHTSLTELFASVETKMSEIGVSGHVEDLV-ACPNFHSQIISNGLFRS 122
Query: 961 FDLSKVLEFGALLASGGQEYDVASDGSKTPGERLARQKQNLRRRLGLDVCEQFMDVNDVI 782
FD++KVLEFGALLASGGQEYD+A+D SK P ERLARQKQNLRRRLGLDVCEQFMDVNDVI
Sbjct: 123 FDMNKVLEFGALLASGGQEYDIANDNSKNPRERLARQKQNLRRRLGLDVCEQFMDVNDVI 182
Query: 781 KDEDLLVNKFSSHENGVGHRSYIFQHGNQIQQLVANIVPTFLSKRPSARELNLLKRKAKI 602
KDEDL+V++ S NG+ HR Y + IQQLVA++VP+ +SKRPSARELNLLKRKAKI
Sbjct: 183 KDEDLVVHRPESQRNGLDHRFYKHPSVHNIQQLVASMVPSVISKRPSARELNLLKRKAKI 242
Query: 601 NAKDQTKSWCDAAESEAPHSQSLVLPKVTCPDP----ISSNKXXXXXXXXXXXXXXDGEG 434
N+KDQ KSW + ++E V CP + DG+G
Sbjct: 243 NSKDQVKSWSEDGDTE-----------VACPQKTERVLDDQALKTADADEEDNLEHDGDG 291
Query: 433 QWPFQNFVEQLILDMFDPNWEVRHGSMMALREIITHHGGSSGVFTPDLSSKSAHSDKTEV 254
+WPF FVEQLI+DMFDP WEVRHGS+MALREI+THHGGS+G+ PDLS A D+
Sbjct: 292 RWPFHGFVEQLIVDMFDPVWEVRHGSVMALREIVTHHGGSAGLVVPDLSLDGA-LDELRE 350
Query: 253 KQELTTLKRKMELDLNVQVPGEETEPNWKKLKSEDGICSTIYTMTSVDEGANPGTCIKME 74
++ +KR+ E+DLN+QV +E EPN K+ KSED T+ M S + C+K+E
Sbjct: 351 REYSNAIKREREIDLNLQVLTDEFEPNPKRHKSEDVSSQTMDMMVSTSNLGSSDICVKLE 410
Query: 73 DGGCDLIPEQVSDVLKVES 17
G +L QV+ + + S
Sbjct: 411 HSGWNLPVGQVNSQVDIVS 429