BLASTX nr result

ID: Coptis25_contig00014538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014538
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40216.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002311040.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002315454.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003590259.1| hypothetical protein MTR_1g050700 [Medicago ...    63   2e-08
ref|XP_004164144.1| PREDICTED: uncharacterized protein LOC101230...    60   1e-07

>emb|CBI40216.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = -2

Query: 291 INFSWRDFLNPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXLKYSFIAA 127
           +N  WRD L+P+PENI+A+GL+GVLTWASVQVLWQ            LKYSFIAA
Sbjct: 129 LNVKWRDLLDPNPENILAIGLSGVLTWASVQVLWQLFFISLTILVAALKYSFIAA 183


>ref|XP_002311040.1| predicted protein [Populus trichocarpa] gi|222850860|gb|EEE88407.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/56 (62%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = -2

Query: 291 INFSWRDFL-NPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXLKYSFIAA 127
           IN  W D L NP+P+NI+AVGLTG+LTWASVQVLWQ            LKYSFIAA
Sbjct: 93  INIKWGDLLLNPNPDNILAVGLTGLLTWASVQVLWQLFFISLVILVAALKYSFIAA 148


>ref|XP_002315454.1| predicted protein [Populus trichocarpa] gi|222864494|gb|EEF01625.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -2

Query: 288 NFSWRDFL-NPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXLKYSFIAA 127
           +  W D L NPDP+NI+AVGLTG+L+WASVQVLWQ            +KYSFIAA
Sbjct: 90  DIKWGDLLLNPDPDNILAVGLTGLLSWASVQVLWQLFVIALAILVAAVKYSFIAA 144


>ref|XP_003590259.1| hypothetical protein MTR_1g050700 [Medicago truncatula]
           gi|355479307|gb|AES60510.1| hypothetical protein
           MTR_1g050700 [Medicago truncatula]
          Length = 144

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/58 (51%), Positives = 37/58 (63%)
 Frame = -2

Query: 300 RVTINFSWRDFLNPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXLKYSFIAA 127
           R     +W   L+ DP+N++A+GLTG+LTWASVQVLWQ            LKYSFIAA
Sbjct: 77  RPLFGLNWSSLLDRDPDNVLALGLTGILTWASVQVLWQLLFISLAILVAALKYSFIAA 134


>ref|XP_004164144.1| PREDICTED: uncharacterized protein LOC101230950 [Cucumis sativus]
          Length = 259

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/55 (56%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -2

Query: 288 NFSWRDFL-NPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXLKYSFIAA 127
           N  W + L +PDP+NI+AV LTG+L WASVQVLWQ            LKYSFIAA
Sbjct: 195 NIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAA 249


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