BLASTX nr result

ID: Coptis25_contig00013945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013945
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-conta...   275   1e-71
ref|XP_003518631.1| PREDICTED: lisH domain and HEAT repeat-conta...   262   7e-68
ref|XP_002528079.1| conserved hypothetical protein [Ricinus comm...   260   3e-67
ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...   259   6e-67
ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...   251   2e-64

>ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468
            homolog [Vitis vinifera]
          Length = 1184

 Score =  275 bits (702), Expect = 1e-71
 Identities = 150/224 (66%), Positives = 164/224 (73%)
 Frame = +3

Query: 3    LEDGSHEATIAVIRALVVAVPHTTDRLRDYLLSKIFQLTNTVPPATDVMRRRDRANAFCE 182
            LEDGSHEATIAV+RALVVA+PHTTD+LRDYLLSKIFQ T    P +DVMRRR+RANAFCE
Sbjct: 990  LEDGSHEATIAVVRALVVAIPHTTDKLRDYLLSKIFQFTTMPSPTSDVMRRRERANAFCE 1049

Query: 183  SIRALDATXXXXXXXXXXXXXXXXXXXIRALDATDLPATSVREFLLPTIHNLLKDSDSLD 362
            SIR                          ALDATDLPATSVRE LLP I NLLKD D+LD
Sbjct: 1050 SIR--------------------------ALDATDLPATSVRELLLPAIQNLLKDLDALD 1083

Query: 363  PAHKEALEIIMKERSGGTFEAISKVMGMSAHLGLPTSVSSFFGEGGLLGKRESGDSLPSE 542
            PAHKEALEII+KERSGGT EAISKVMG  AHLG+ +SV+S FGEGGLLGK++SGD  P E
Sbjct: 1084 PAHKEALEIILKERSGGTLEAISKVMG--AHLGIASSVTSLFGEGGLLGKKDSGDP-PPE 1140

Query: 543  SVESPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDAPKEQ 674
             VESP+   P P EDTRF RIMRGNF +MLR K K  ED    Q
Sbjct: 1141 PVESPRAVPPPPAEDTRFMRIMRGNFTDMLRSKAKNQEDTSTGQ 1184


>ref|XP_003518631.1| PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468
            homolog [Glycine max]
          Length = 1184

 Score =  262 bits (670), Expect = 7e-68
 Identities = 143/223 (64%), Positives = 165/223 (73%)
 Frame = +3

Query: 3    LEDGSHEATIAVIRALVVAVPHTTDRLRDYLLSKIFQLTNTVPPATDVMRRRDRANAFCE 182
            LEDGSHEATIAVIRALVVAVPHTT+RLR+YLLSKI QLT     ++D+MRRR+RANAFCE
Sbjct: 991  LEDGSHEATIAVIRALVVAVPHTTERLREYLLSKISQLTAMPNSSSDLMRRRERANAFCE 1050

Query: 183  SIRALDATXXXXXXXXXXXXXXXXXXXIRALDATDLPATSVREFLLPTIHNLLKDSDSLD 362
            +IR                          ALDATDLPA SVR+  LP I NLLKD D+LD
Sbjct: 1051 AIR--------------------------ALDATDLPANSVRDLFLPAIQNLLKDLDALD 1084

Query: 363  PAHKEALEIIMKERSGGTFEAISKVMGMSAHLGLPTSVSSFFGEGGLLGKRESGDSLPSE 542
            PAHKEALEIIMKERSGGTFE+ SKVMG  AH+GLP+SV+SFFGE GLLGK+E+ +  PSE
Sbjct: 1085 PAHKEALEIIMKERSGGTFESFSKVMG--AHIGLPSSVTSFFGESGLLGKKETTEP-PSE 1141

Query: 543  SVESPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDAPKE 671
            +  SPK  +P+P EDTRF+RIM GNF EMLRGK K  E+   +
Sbjct: 1142 ATVSPKAAAPSPAEDTRFKRIMLGNFSEMLRGKAKAPEEGQNQ 1184


>ref|XP_002528079.1| conserved hypothetical protein [Ricinus communis]
            gi|223532540|gb|EEF34329.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1167

 Score =  260 bits (665), Expect = 3e-67
 Identities = 142/224 (63%), Positives = 166/224 (74%), Gaps = 6/224 (2%)
 Frame = +3

Query: 3    LEDGSHEATIAVIRALVVAVPHTTDRLRDYLLS------KIFQLTNTVPPATDVMRRRDR 164
            LEDGSHEAT+AV+R L+VA+PHTT+RLRDY+L+      +I+Q T T  P++DV+RRR+R
Sbjct: 973  LEDGSHEATVAVVRGLLVAIPHTTERLRDYILNFMGLVLRIYQFTATPAPSSDVVRRRER 1032

Query: 165  ANAFCESIRALDATXXXXXXXXXXXXXXXXXXXIRALDATDLPATSVREFLLPTIHNLLK 344
            ANAFCESIRALDA                          TDL ATSVR+FLLP I NLLK
Sbjct: 1033 ANAFCESIRALDA--------------------------TDLSATSVRDFLLPAIQNLLK 1066

Query: 345  DSDSLDPAHKEALEIIMKERSGGTFEAISKVMGMSAHLGLPTSVSSFFGEGGLLGKRESG 524
            D D+LDPAHKEALEIIMKERSG TFEAISKVMG  AHLG+ +SV+SFFGEGGLLGK+E+ 
Sbjct: 1067 DPDALDPAHKEALEIIMKERSGNTFEAISKVMG--AHLGIASSVTSFFGEGGLLGKKEAA 1124

Query: 525  DSLPSESVESPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNE 656
            D LP +  ESPKP  P   EDTRFRRIMRGNF +MLRGK + N+
Sbjct: 1125 DPLPQDP-ESPKPVLPPAAEDTRFRRIMRGNFTDMLRGKTQPNQ 1167


>ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
            repeat-containing protein KIAA1468 homolog [Cucumis
            sativus]
          Length = 1190

 Score =  259 bits (662), Expect = 6e-67
 Identities = 142/222 (63%), Positives = 164/222 (73%), Gaps = 2/222 (0%)
 Frame = +3

Query: 3    LEDGSHEATIAVIRALVVAVPHTTDRLRDYLLSKIFQLTNTVPPATDVMRRRDRANAFCE 182
            LEDGSHEATIAVIRALVVAVPHTT+RLRDYLLSKIFQL+ T P ++ +MRR +RA+AFCE
Sbjct: 994  LEDGSHEATIAVIRALVVAVPHTTERLRDYLLSKIFQLSATPPTSSTLMRRHERADAFCE 1053

Query: 183  SIRALDATXXXXXXXXXXXXXXXXXXXIRALDATDLPATSVREFLLPTIHNLLKDSDSLD 362
            +IR                          ALDATDL  TS+RE  LPTI NLL+D D+LD
Sbjct: 1054 AIR--------------------------ALDATDLSPTSIRELFLPTIQNLLRDIDALD 1087

Query: 363  PAHKEALEIIMKERSGGTFEAISKVMGMSAHLGLPTSVSSFFG--EGGLLGKRESGDSLP 536
            PAH+EALEIIMKERSGGTFE ISKVMG  AHLG+ +SV++FFG   GGLLGK+ES +  P
Sbjct: 1088 PAHREALEIIMKERSGGTFETISKVMG--AHLGIASSVTNFFGVDGGGLLGKKESLEPTP 1145

Query: 537  SESVESPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDA 662
            SE VE P P  P P EDTRFRRIMRG+F +MLRGK K  E++
Sbjct: 1146 SEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEES 1187


>ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
            repeat-containing protein KIAA1468 homolog [Cucumis
            sativus]
          Length = 1249

 Score =  251 bits (640), Expect = 2e-64
 Identities = 142/233 (60%), Positives = 164/233 (70%), Gaps = 13/233 (5%)
 Frame = +3

Query: 3    LEDGSHEATIAVIRALVVAVPHTTDRLRDY-----------LLSKIFQLTNTVPPATDVM 149
            LEDGSHEATIAVIRALVVAVPHTT+RLRDY           LLSKIFQL+ T P ++ +M
Sbjct: 1042 LEDGSHEATIAVIRALVVAVPHTTERLRDYILGRRSNYYEHLLSKIFQLSATPPTSSTLM 1101

Query: 150  RRRDRANAFCESIRALDATXXXXXXXXXXXXXXXXXXXIRALDATDLPATSVREFLLPTI 329
            RR +RA+AFCE+IRALDA                          TDL  TS+RE  LPTI
Sbjct: 1102 RRHERADAFCEAIRALDA--------------------------TDLSPTSIRELFLPTI 1135

Query: 330  HNLLKDSDSLDPAHKEALEIIMKERSGGTFEAISKVMGMSAHLGLPTSVSSFFG--EGGL 503
             NLL+D D+LDPAH+EALEIIMKERSGGTFE ISKVMG  AHLG+ +SV++FFG   GGL
Sbjct: 1136 QNLLRDIDALDPAHREALEIIMKERSGGTFETISKVMG--AHLGIASSVTNFFGVDGGGL 1193

Query: 504  LGKRESGDSLPSESVESPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDA 662
            LGK+ES +  PSE VE P P  P P EDTRFRRIMRG+F +MLRGK K  E++
Sbjct: 1194 LGKKESLEPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEES 1246


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