BLASTX nr result

ID: Coptis25_contig00013944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013944
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_003634240.1| PREDICTED: uncharacterized protein LOC100855...    72   5e-11
emb|CBI14947.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]       64   1e-08

>ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|222868632|gb|EEF05763.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
 Frame = -1

Query: 513 VSFGHEDLTKNHHDNWHTTSDEYRVHVNKIERMPSIID-APHYPNLHMLFNNK-----AX 352
           +S G    T+  H  W TTSD+Y  +++K+ RMPS++  AP YP++   FNNK     + 
Sbjct: 1   MSKGTVHQTRQQH-GWDTTSDDYHAYISKLSRMPSVLHGAPQYPSVRKAFNNKRNPTKSP 59

Query: 351 XXXXXXXXXXQIEHAKNSNQKVHDEDVNMEAEKFILQKRKAFGLCKWMTMK 199
                      IE   N   +V +E V+ EAE FI QK K   LCKW T K
Sbjct: 60  KKVQVTEQVQIIEQNGNQKSEVIEETVDHEAEGFIQQKHKGLELCKWKTFK 110


>ref|XP_003634240.1| PREDICTED: uncharacterized protein LOC100855230 [Vitis vinifera]
          Length = 162

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 51/139 (36%), Positives = 65/139 (46%), Gaps = 23/139 (16%)
 Frame = -1

Query: 543 LLVPTIMSR--------RVSFGHEDLTKNHHDNWHTTSDEYRVHVNKIERMPSIID-APH 391
           LL+P I SR        +   G  D    H   W TT D+Y  H+ ++ER  SI+  APH
Sbjct: 25  LLLPEIASRANLEADPKKTMLGSSDRKPVH--GWDTTPDDYLSHIKRMERSLSIVPGAPH 82

Query: 390 YPNLHMLFNNKAXXXXXXXXXXXQIEHAK-----------NSNQKVHDE---DVNMEAEK 253
           YP +H  FNNK+           Q +  K           N + +V DE   D+  EAE 
Sbjct: 83  YPVVHKAFNNKSPFEEAQGNGRKQRQPRKVSFQDQQGQSNNGSSQVVDEETDDIEAEAEG 142

Query: 252 FILQKRKAFGLCKWMTMKA 196
           FI QK + F LCKW T KA
Sbjct: 143 FIQQKHRGFELCKWKTFKA 161


>emb|CBI14947.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 47/125 (37%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
 Frame = -1

Query: 543 LLVPTIMSR--------RVSFGHEDLTKNHHDNWHTTSDEYRVHVNKIERMPSIID-APH 391
           LL+P I SR        +   G  D    H   W TT D+Y  H+ ++ER  SI+  APH
Sbjct: 25  LLLPEIASRANLEADPKKTMLGSSDRKPVH--GWDTTPDDYLSHIKRMERSLSIVPGAPH 82

Query: 390 YPNLHMLFNNKAXXXXXXXXXXXQIEHAKNSNQKVHDEDVNMEAEKFILQKRKAFGLCKW 211
           YP +H  FNNK+             E A+           N EAE FI QK + F LCKW
Sbjct: 83  YPVVHKAFNNKSP-----------FEEAQG----------NAEAEGFIQQKHRGFELCKW 121

Query: 210 MTMKA 196
            T KA
Sbjct: 122 KTFKA 126


>ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|222858745|gb|EEE96292.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 23/132 (17%)
 Frame = -1

Query: 525 MSRRVSFGHEDLTKNHHDNWHTTSDEYRVHVNKIERMPSII-DAPHYPNLHMLFNNKAXX 349
           +S+++S G    T+    + +TTS +Y  +++++ +MPSII  AP YP++H  FNNK   
Sbjct: 28  LSKKMSKGSAYQTRQRQGS-NTTSGDYHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQ 86

Query: 348 XXXXXXXXXQIEHAKN---SNQKVH-------------------DEDVNMEAEKFILQKR 235
                       + KN   S +KV                    +EDV+ EA+ FI QK+
Sbjct: 87  EEEVNEARQDNVNKKNPARSTKKVRVKEQVQVIDQNGNRKSEDIEEDVDDEADGFIKQKQ 146

Query: 234 KAFGLCKWMTMK 199
           K F LCKW T K
Sbjct: 147 KGFELCKWKTFK 158


>gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 129

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 23/112 (20%)
 Frame = -1

Query: 465 HTTSDEYRVHVNKIERMPSII-DAPHYPNLHMLFNNKAXXXXXXXXXXXQIEHAKN---S 298
           +TTS +Y  +++++ +MPSII  AP YP++H  FNNK               + KN   S
Sbjct: 16  NTTSGDYHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPTRS 75

Query: 297 NQKVH-------------------DEDVNMEAEKFILQKRKAFGLCKWMTMK 199
            +KV                    +EDV+ EA+ FI QK+K F LCKW T K
Sbjct: 76  TKKVRVKEQVQVIDQNGNRKSEDIEEDVDAEADGFIKQKQKGFELCKWKTFK 127


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