BLASTX nr result

ID: Coptis25_contig00013731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013731
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27221.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266...   373   e-101
ref|XP_002265181.1| PREDICTED: uncharacterized protein LOC100251...   363   3e-98
emb|CAN74487.1| hypothetical protein VITISV_029271 [Vitis vinifera]   363   3e-98
ref|XP_003631023.1| Zinc finger protein [Medicago truncatula] gi...   363   5e-98

>emb|CBI27221.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  377 bits (968), Expect = e-102
 Identities = 210/349 (60%), Positives = 231/349 (66%), Gaps = 18/349 (5%)
 Frame = -3

Query: 995  MGKKKKR-ASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHK 819
            MGKKKKR A+KVWCYYCDREF+DEKILVQHQKA+HFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1    MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 818  ETVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXX 639
            ETV+KVPNAKP RESTEIEI+GMEGIP EILAAHYGE+DED PSK+AKV+IPS+      
Sbjct: 61   ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 638  XXXXXXXXXXPHSNFGAMQPIYNSALAV----XXXXXXXXXXXXXXPAVSMPTAGPVGMA 471
                      P    GAM P+YN ALAV                  PA+S+P A P+GM 
Sbjct: 121  VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISIPPA-PLGMT 179

Query: 470  QQPLFPIQNVTHPMSSVTTXXXXXXXXXXXPGLPSLTP--PVSQPLFPVGGNGSIP---- 309
            QQPLFPIQ V  P+ S  +           PGLP  +P  P+ QPLFPVG N ++P    
Sbjct: 180  QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 308  -------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPPSIQGGSFIGSHSYASGPNTG 150
                                                Y+ PSIQGG  I SHSYASGPNTG
Sbjct: 240  PFSTPMLSTSIPLSSQAELNSSIEAHSSTNSSLASSYSAPSIQGGPSINSHSYASGPNTG 299

Query: 149  GPSIGPPPVIANKVPAPQPATNEVYLVWDDDAMSMEERRMSLMKYQVHD 3
            GPSIGPPPVIANKVPA QPA NEVYLVWDD+AMSMEERRMSLMKYQVHD
Sbjct: 300  GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHD 348


>ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266425 [Vitis vinifera]
          Length = 362

 Score =  373 bits (957), Expect = e-101
 Identities = 206/338 (60%), Positives = 226/338 (66%), Gaps = 7/338 (2%)
 Frame = -3

Query: 995  MGKKKKR-ASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHK 819
            MGKKKKR A+KVWCYYCDREF+DEKILVQHQKA+HFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1    MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 818  ETVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXX 639
            ETV+KVPNAKP RESTEIEI+GMEGIP EILAAHYGE+DED PSK+AKV+IPS+      
Sbjct: 61   ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 638  XXXXXXXXXXPHSNFGAMQPIYNSALAV----XXXXXXXXXXXXXXPAVSMPTAGPVGMA 471
                      P    GAM P+YN ALAV                  PA+S+P A P+GM 
Sbjct: 121  VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISIPPA-PLGMT 179

Query: 470  QQPLFPIQNVTHPMSSVTTXXXXXXXXXXXPGLPSLTP--PVSQPLFPVGGNGSIPXXXX 297
            QQPLFPIQ V  P+ S  +           PGLP  +P  P+ QPLFPVG N ++P    
Sbjct: 180  QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLP--TK 237

Query: 296  XXXXXXXXXXXXXXXXXXXXXXXXXYAPPSIQGGSFIGSHSYASGPNTGGPSIGPPPVIA 117
                                      A  S   G  I SHSYASGPNTGGPSIGPPPVIA
Sbjct: 238  NSPFSTPMLSTSIPLSSQAELNSSIEAHSSTNSGPSINSHSYASGPNTGGPSIGPPPVIA 297

Query: 116  NKVPAPQPATNEVYLVWDDDAMSMEERRMSLMKYQVHD 3
            NKVPA QPA NEVYLVWDD+AMSMEERRMSLMKYQVHD
Sbjct: 298  NKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHD 335


>ref|XP_002265181.1| PREDICTED: uncharacterized protein LOC100251787 [Vitis vinifera]
            gi|296087547|emb|CBI34136.3| unnamed protein product
            [Vitis vinifera]
          Length = 366

 Score =  363 bits (933), Expect = 3e-98
 Identities = 198/342 (57%), Positives = 225/342 (65%), Gaps = 11/342 (3%)
 Frame = -3

Query: 995  MGKKKKRASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHKE 816
            MGKKKKRA+KV+CYYC+REF+DEKILVQHQKA+HFKCHVC+KKLSTA GM+IHVLQVHKE
Sbjct: 1    MGKKKKRAAKVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKE 60

Query: 815  TVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXXX 636
            TV+KVPNA P RESTEIEIFGM+GIP +ILAAHYGEQDED PSK+AKV++P  N      
Sbjct: 61   TVSKVPNANPGRESTEIEIFGMQGIPDDILAAHYGEQDEDNPSKLAKVEVPPTNVVGVMP 120

Query: 635  XXXXXXXXXPHSNFGAMQPIYNSALAV--XXXXXXXXXXXXXXPAVSMPTAGPVGMAQQP 462
                     P S FGA+ PIYNSA+AV                PAV +P A P+G+AQ+P
Sbjct: 121  PGSVGMGFPPQSTFGAIPPIYNSAVAVPPGWPVPRPQPWFPQHPAVPVPPAAPLGLAQRP 180

Query: 461  LFPIQNVTHPMSSVTTXXXXXXXXXXXPGLPSLTPPVSQPLFPVGGNGSIPXXXXXXXXX 282
            LFPIQNVT P+ S T              L S   PVSQPLFPV G  SIP         
Sbjct: 181  LFPIQNVTPPLPSATLQPSFQTTPPGP--LSSSPTPVSQPLFPVVGTASIPSQNSQVTAA 238

Query: 281  XXXXXXXXXXXXXXXXXXXXYA---------PPSIQGGSFIGSHSYASGPNTGGPSIGPP 129
                                            PSIQ G+ + SH+YASG NT GPSIGPP
Sbjct: 239  ALSAPITSSTPSELNNPSYSSINTSMVNGYHAPSIQ-GTLVSSHTYASGSNTSGPSIGPP 297

Query: 128  PVIANKVPAPQPATNEVYLVWDDDAMSMEERRMSLMKYQVHD 3
            P+IANK P  QPA+NEVYLVWDD+AMSMEERRMSL+KYQVHD
Sbjct: 298  PMIANKAPVIQPASNEVYLVWDDEAMSMEERRMSLLKYQVHD 339


>emb|CAN74487.1| hypothetical protein VITISV_029271 [Vitis vinifera]
          Length = 394

 Score =  363 bits (933), Expect = 3e-98
 Identities = 198/342 (57%), Positives = 225/342 (65%), Gaps = 11/342 (3%)
 Frame = -3

Query: 995  MGKKKKRASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHKE 816
            MGKKKKRA+KV+CYYC+REF+DEKILVQHQKA+HFKCHVC+KKLSTA GM+IHVLQVHKE
Sbjct: 1    MGKKKKRAAKVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKE 60

Query: 815  TVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXXX 636
            TV+KVPNA P RESTEIEIFGM+GIP +ILAAHYGEQDED PSK+AKV++P  N      
Sbjct: 61   TVSKVPNANPGRESTEIEIFGMQGIPDDILAAHYGEQDEDNPSKLAKVEVPPTNVVGVMP 120

Query: 635  XXXXXXXXXPHSNFGAMQPIYNSALAV--XXXXXXXXXXXXXXPAVSMPTAGPVGMAQQP 462
                     P S FGA+ PIYNSA+AV                PAV +P A P+G+AQ+P
Sbjct: 121  PGSVGMGFPPQSTFGAIPPIYNSAVAVPPGWPVPRPQPWFPQHPAVPVPPAAPLGLAQRP 180

Query: 461  LFPIQNVTHPMSSVTTXXXXXXXXXXXPGLPSLTPPVSQPLFPVGGNGSIPXXXXXXXXX 282
            LFPIQNVT P+ S T              L S   PVSQPLFPV G  SIP         
Sbjct: 181  LFPIQNVTPPLPSATLQPSFQTTPPGP--LSSSPTPVSQPLFPVVGTASIPSQNSQVIAA 238

Query: 281  XXXXXXXXXXXXXXXXXXXXYA---------PPSIQGGSFIGSHSYASGPNTGGPSIGPP 129
                                            PSIQ G+ + SH+YASG NT GPSIGPP
Sbjct: 239  ALSAPITSSTPSELNNPSYSSINTSMVNGYHAPSIQ-GTLVSSHTYASGSNTSGPSIGPP 297

Query: 128  PVIANKVPAPQPATNEVYLVWDDDAMSMEERRMSLMKYQVHD 3
            P+IANK P  QPA+NEVYLVWDD+AMSMEERRMSL+KYQVHD
Sbjct: 298  PMIANKAPVIQPASNEVYLVWDDEAMSMEERRMSLLKYQVHD 339


>ref|XP_003631023.1| Zinc finger protein [Medicago truncatula] gi|355525045|gb|AET05499.1|
            Zinc finger protein [Medicago truncatula]
          Length = 465

 Score =  363 bits (931), Expect = 5e-98
 Identities = 206/355 (58%), Positives = 224/355 (63%), Gaps = 24/355 (6%)
 Frame = -3

Query: 995  MGKKKKR-ASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHK 819
            MG+KKKR ASKVWCYYCDREFDDEKILVQHQKA+HFKCHVCHKKLSTAGGMSIHVLQVHK
Sbjct: 1    MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 818  ETVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXX 639
            E VTKVPNAKP RESTEIEI+GM+GIPP++LAAHYG++D+D PSK AKVDIPS  F    
Sbjct: 61   ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 638  XXXXXXXXXXPHSNFGAMQPIYNSAL-----AVXXXXXXXXXXXXXXPAVSMPTAGPVGM 474
                      P S  G ++PIYN A+     A               P VSMP   PV  
Sbjct: 121  VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSMPP--PVQY 178

Query: 473  AQQPLFPIQNVTHPMSSVTTXXXXXXXXXXXPGLPSLTP--PVSQPLFPVGGN------- 321
             QQPLFP+QNV  P+ S T+           PGLPS TP  PVSQPLFPV GN       
Sbjct: 179  PQQPLFPVQNVRPPLPSTTS--PALQSQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQS 236

Query: 320  ---------GSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPPSIQGGSFIGSHSYA 168
                      S+P                               P    GG    SHSYA
Sbjct: 237  SPFSAAPMSSSVPSITPGLSSNVPIDAHLGINSSVTSSYQAIGIP----GGIASNSHSYA 292

Query: 167  SGPNTGGPSIGPPPVIANKVPAPQPATNEVYLVWDDDAMSMEERRMSLMKYQVHD 3
            SGPNTGGPSIGPPPVI+NK PA QPATNEVYLVWDD+AMSMEERRMSL KYQVHD
Sbjct: 293  SGPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHD 347


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