BLASTX nr result

ID: Coptis25_contig00013552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013552
         (1684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270437.2| PREDICTED: ankyrin repeat domain-containing ...   401   e-109
emb|CBI24454.3| unnamed protein product [Vitis vinifera]              401   e-109
ref|XP_004134839.1| PREDICTED: ankyrin repeat domain-containing ...   373   e-101
ref|XP_002327626.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_003538896.1| PREDICTED: ankyrin repeat domain-containing ...   350   5e-94

>ref|XP_002270437.2| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic
            isoform 1 [Vitis vinifera]
          Length = 439

 Score =  401 bits (1031), Expect = e-109
 Identities = 214/349 (61%), Positives = 252/349 (72%), Gaps = 8/349 (2%)
 Frame = -2

Query: 1419 IFEDPYLQKDYNFEKPSNK-KKQTMSLPPEEDLVPEKWKEAVVEYNITKKERKKIALQIE 1243
            +FEDPYLQ +++F   + K  K  + + PE +LVPEKWKE   + NITKKER+KIA Q+E
Sbjct: 83   VFEDPYLQDNFDFNAQNPKHNKPNLEIEPE-NLVPEKWKEVQEQINITKKERRKIAQQLE 141

Query: 1242 YGSRIERKNTKL------PXXXXXXXXXXXXXXXXXLNPXXXXXXXXXXXXXXXXXXXXX 1081
            YGSR+E++   L                          P                     
Sbjct: 142  YGSRVEKRKQGLVPISQEDYSSYRETKLAQLKPLVLDKPTSFPVKEEAAEAAPVEGNPNE 201

Query: 1080 XXXSRVAPRNPRVAVYKGTLDDITEFFNSDSYVPGEKKSV-GRGKLLSKEEKALLNKRIP 904
               SRV PRNPR AVY GTL+DI+EFFNS +Y PG   +  G  KL +KEEK LLNKRIP
Sbjct: 202  PTSSRVVPRNPRRAVYGGTLEDISEFFNSGTYQPGGNAATQGPRKLFTKEEKLLLNKRIP 261

Query: 903  DLENASSGKWLPLHTLAASGEFYLVDALLKHAIDINAADKDGLTALHKAILCRKQAVTNY 724
            DL  A+SGKWLPLHTLAASGEFYL+DALLKH +DINA DKDGLTALHKAI+ +KQA+TNY
Sbjct: 262  DLAAATSGKWLPLHTLAASGEFYLMDALLKHNVDINAVDKDGLTALHKAIIGKKQAITNY 321

Query: 723  LLRESANPFIRDREGATLMHYAVQAAAIPTIKILLLYNVDINLADDDGWTPLHLAILTRR 544
            LLRESANP++RD+EGATLMHYAVQ A+   IKILLLYNVDINL D+DGWTPLHLA+ TRR
Sbjct: 322  LLRESANPYVRDKEGATLMHYAVQTASSHAIKILLLYNVDINLQDNDGWTPLHLAVQTRR 381

Query: 543  TDVVKLLLIKGADKTLKNQDGLTSLDLCLYSGRATRTYELIKLLKQLPK 397
            TD+V+LLLIKGAD+TLKNQDGL+ L+LCLYSG+ TRTYELIKLLKQLP+
Sbjct: 382  TDLVRLLLIKGADRTLKNQDGLSPLELCLYSGQDTRTYELIKLLKQLPQ 430


>emb|CBI24454.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  401 bits (1031), Expect = e-109
 Identities = 214/349 (61%), Positives = 252/349 (72%), Gaps = 8/349 (2%)
 Frame = -2

Query: 1419 IFEDPYLQKDYNFEKPSNK-KKQTMSLPPEEDLVPEKWKEAVVEYNITKKERKKIALQIE 1243
            +FEDPYLQ +++F   + K  K  + + PE +LVPEKWKE   + NITKKER+KIA Q+E
Sbjct: 175  VFEDPYLQDNFDFNAQNPKHNKPNLEIEPE-NLVPEKWKEVQEQINITKKERRKIAQQLE 233

Query: 1242 YGSRIERKNTKL------PXXXXXXXXXXXXXXXXXLNPXXXXXXXXXXXXXXXXXXXXX 1081
            YGSR+E++   L                          P                     
Sbjct: 234  YGSRVEKRKQGLVPISQEDYSSYRETKLAQLKPLVLDKPTSFPVKEEAAEAAPVEGNPNE 293

Query: 1080 XXXSRVAPRNPRVAVYKGTLDDITEFFNSDSYVPGEKKSV-GRGKLLSKEEKALLNKRIP 904
               SRV PRNPR AVY GTL+DI+EFFNS +Y PG   +  G  KL +KEEK LLNKRIP
Sbjct: 294  PTSSRVVPRNPRRAVYGGTLEDISEFFNSGTYQPGGNAATQGPRKLFTKEEKLLLNKRIP 353

Query: 903  DLENASSGKWLPLHTLAASGEFYLVDALLKHAIDINAADKDGLTALHKAILCRKQAVTNY 724
            DL  A+SGKWLPLHTLAASGEFYL+DALLKH +DINA DKDGLTALHKAI+ +KQA+TNY
Sbjct: 354  DLAAATSGKWLPLHTLAASGEFYLMDALLKHNVDINAVDKDGLTALHKAIIGKKQAITNY 413

Query: 723  LLRESANPFIRDREGATLMHYAVQAAAIPTIKILLLYNVDINLADDDGWTPLHLAILTRR 544
            LLRESANP++RD+EGATLMHYAVQ A+   IKILLLYNVDINL D+DGWTPLHLA+ TRR
Sbjct: 414  LLRESANPYVRDKEGATLMHYAVQTASSHAIKILLLYNVDINLQDNDGWTPLHLAVQTRR 473

Query: 543  TDVVKLLLIKGADKTLKNQDGLTSLDLCLYSGRATRTYELIKLLKQLPK 397
            TD+V+LLLIKGAD+TLKNQDGL+ L+LCLYSG+ TRTYELIKLLKQLP+
Sbjct: 474  TDLVRLLLIKGADRTLKNQDGLSPLELCLYSGQDTRTYELIKLLKQLPQ 522


>ref|XP_004134839.1| PREDICTED: ankyrin repeat domain-containing protein,
            chloroplastic-like [Cucumis sativus]
            gi|449491289|ref|XP_004158851.1| PREDICTED: ankyrin
            repeat domain-containing protein, chloroplastic-like
            [Cucumis sativus]
          Length = 431

 Score =  373 bits (958), Expect = e-101
 Identities = 199/360 (55%), Positives = 242/360 (67%), Gaps = 14/360 (3%)
 Frame = -2

Query: 1419 IFEDPYLQKDYNFEK--PSNKKKQTMSLPPE---EDLVPEKWKEAVVEYNITKKERKKIA 1255
            +F+DPY+  D + +   PS  K +  S   E   E+LVP++WKE   E NITKKER+KIA
Sbjct: 75   VFDDPYVSDDSSVDNSIPSTAKSKPKSAVVEINPENLVPDEWKEVQAEINITKKERRKIA 134

Query: 1254 LQIEYGSRIERKNTKL---------PXXXXXXXXXXXXXXXXXLNPXXXXXXXXXXXXXX 1102
             ++E+GSR+E+K   L                            NP              
Sbjct: 135  QEMEFGSRVEKKKKGLVPLRSVNLEEYLSYKEAKMAQLKPLVLDNPTSFPATEEVNGAED 194

Query: 1101 XXXXXXXXXXSRVAPRNPRVAVYKGTLDDITEFFNSDSYVPGEKKSVGRGKLLSKEEKAL 922
                       RVAP+NP+ AVY   L+D++EFFNS  Y P ++KS G  KL SKEEKA+
Sbjct: 195  AMSRSSE----RVAPKNPKWAVYGRGLEDVSEFFNSGQYQPADRKSEGPRKLFSKEEKAM 250

Query: 921  LNKRIPDLENASSGKWLPLHTLAASGEFYLVDALLKHAIDINAADKDGLTALHKAILCRK 742
            LNKR+PDL +A S  WLPLHTL  SGEFYLVD LLK+ +DIN  DK G TALH+AI+ +K
Sbjct: 251  LNKRVPDLASARSDMWLPLHTLVGSGEFYLVDELLKNNVDINGVDKVGFTALHRAIVAKK 310

Query: 741  QAVTNYLLRESANPFIRDREGATLMHYAVQAAAIPTIKILLLYNVDINLADDDGWTPLHL 562
            QA+TNYLLRESANPF+RD++GATLMHYAVQ A+   IK LLLYNVDINL D DGWTPLHL
Sbjct: 311  QAITNYLLRESANPFVRDKDGATLMHYAVQTASSQAIKTLLLYNVDINLQDKDGWTPLHL 370

Query: 561  AILTRRTDVVKLLLIKGADKTLKNQDGLTSLDLCLYSGRATRTYELIKLLKQLPKTGRLP 382
            A+  RRTDVV+LLLIKGADKTLKN +GLT LD+CLYSG+ T+TYELIKLLKQLP+  +LP
Sbjct: 371  AVQARRTDVVRLLLIKGADKTLKNAEGLTPLDICLYSGQDTKTYELIKLLKQLPRPSKLP 430


>ref|XP_002327626.1| predicted protein [Populus trichocarpa] gi|222836711|gb|EEE75104.1|
            predicted protein [Populus trichocarpa]
          Length = 392

 Score =  371 bits (953), Expect = e-100
 Identities = 204/353 (57%), Positives = 242/353 (68%), Gaps = 15/353 (4%)
 Frame = -2

Query: 1419 IFEDPYLQKDYN-FEKP---SNKKKQTMSLPP--EEDLVPEKWKEAVVEYNITKKERKKI 1258
            IFEDPYL+ + N  E P   + KKKQ   +P    E+LVPEKW++A  E NI KKER+KI
Sbjct: 42   IFEDPYLETNSNAIEDPKLKTFKKKQKRVVPTIEAENLVPEKWRDAQAEINIGKKERRKI 101

Query: 1257 ALQIEYGSRIERKNTKL---------PXXXXXXXXXXXXXXXXXLNPXXXXXXXXXXXXX 1105
            A ++EY  + ERK   L                            NP             
Sbjct: 102  AQEMEYNKKFERKKKGLVPIRSVNLEEYQAFKEAKLAQLKPLVLGNPESFKEEEKMKEDE 161

Query: 1104 XXXXXXXXXXXSRVAPRNPRVAVYKGTLDDITEFFNSDSYVPGEKKSVGRGKLLSKEEKA 925
                        RV  ++PR AVY   LDD+ EF NS+ Y PGE KS G+ KL +KEEK 
Sbjct: 162  VEVKEIVSE---RVKGKHPRWAVYGRGLDDVREFLNSEDYEPGEHKSEGKRKLFTKEEKV 218

Query: 924  LLNKRIPDLENASSGKWLPLHTLAASGEFYLVDALLKHAIDINAADKDGLTALHKAILCR 745
            LLNKR+PDL  A+S KWLPLHTLAASGEF+L+DALLKH +DINAAD +G TALH+AI+C+
Sbjct: 219  LLNKRVPDLAVANSSKWLPLHTLAASGEFHLMDALLKHNVDINAADVNGWTALHRAIVCK 278

Query: 744  KQAVTNYLLRESANPFIRDREGATLMHYAVQAAAIPTIKILLLYNVDINLADDDGWTPLH 565
            KQA+T+YLLRESA+PF+RD EGATLMHYAVQ A+ P IK+LLLYNVDINL D+DGWTPLH
Sbjct: 279  KQAITSYLLRESADPFVRDAEGATLMHYAVQTASAPAIKLLLLYNVDINLQDNDGWTPLH 338

Query: 564  LAILTRRTDVVKLLLIKGADKTLKNQDGLTSLDLCLYSGRATRTYELIKLLKQ 406
            LA+ T+RTD+VKLLLIK AD+TLKN+DG T LDLCLYSGR TRTYELIKLLKQ
Sbjct: 339  LAVQTQRTDIVKLLLIKRADRTLKNKDGSTPLDLCLYSGRDTRTYELIKLLKQ 391


>ref|XP_003538896.1| PREDICTED: ankyrin repeat domain-containing protein,
            chloroplastic-like [Glycine max]
          Length = 444

 Score =  350 bits (899), Expect = 5e-94
 Identities = 202/419 (48%), Positives = 253/419 (60%), Gaps = 28/419 (6%)
 Frame = -2

Query: 1578 IPISPFHYSLSTTHSLSFPRKPFSFSLNSYSPSL--AXXXXXXXXXXXXXXXXXGIFEDP 1405
            +P+S    +L  + +L FPR   +++L S SPSL                    G+F++P
Sbjct: 20   LPVSTSR-NLPLSQTLHFPR---NWNLRSLSPSLHLTYDDSDDHVIGDCVVFEDGVFDEP 75

Query: 1404 Y----------LQKDYNFEKPSNKKKQTMSLPPEEDLVPEKWKEAVVEYNITKKERKKIA 1255
                       L  D    KP    ++ +     E+LVP+KW+E   E NITK+E +KIA
Sbjct: 76   VFHNHHLNSDNLAVDKPKPKPGRSWRKKVEETLGENLVPDKWREVQAEINITKREMRKIA 135

Query: 1254 LQIEYGSRIER----------------KNTKLPXXXXXXXXXXXXXXXXXLNPXXXXXXX 1123
             ++E+ S++E+                K  K                    N        
Sbjct: 136  REVEFNSKVEKKRRGLIPLRDMNLDDYKAYKEAKLAQMKLLDYASCSPVGQNVPEAEPEF 195

Query: 1122 XXXXXXXXXXXXXXXXXSRVAPRNPRVAVYKGTLDDITEFFNSDSYVPGEKKSVGRGKLL 943
                              RV P+NPR AVY   L+D+TEFFNSD+Y P  K   GR KL 
Sbjct: 196  NRGGEEVAEAEPELNAGERVEPKNPRWAVYGRGLEDVTEFFNSDNYDPTAKTLGGRRKLF 255

Query: 942  SKEEKALLNKRIPDLENASSGKWLPLHTLAASGEFYLVDALLKHAIDINAADKDGLTALH 763
            +KEEK LLNKRIPDL  A+S KWLPLHTLAA GEFYL+D+LLKH +DINA D+DGLTALH
Sbjct: 256  NKEEKVLLNKRIPDLAAATSDKWLPLHTLAACGEFYLLDSLLKHNVDINAVDRDGLTALH 315

Query: 762  KAILCRKQAVTNYLLRESANPFIRDREGATLMHYAVQAAAIPTIKILLLYNVDINLADDD 583
            +AI+ +KQA+TNYLLR SANPF++D EGATLMHYAV  A+  T+KILLLYNVDINL D+ 
Sbjct: 316  RAIIGKKQAITNYLLRNSANPFVQDNEGATLMHYAVLTASTQTVKILLLYNVDINLPDNY 375

Query: 582  GWTPLHLAILTRRTDVVKLLLIKGADKTLKNQDGLTSLDLCLYSGRATRTYELIKLLKQ 406
            GWTPLHLA+  +RTD+V+LLLIKGADKTLKN+DGLT LDLCLY+G+  RTYELIKL KQ
Sbjct: 376  GWTPLHLAVQAQRTDLVRLLLIKGADKTLKNEDGLTPLDLCLYNGQCARTYELIKLFKQ 434


Top