BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013467
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   187   4e-45
ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   176   2e-41
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   175   3e-41
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-40

>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
           vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
           splicing factor U2af small subunit B isoform 2 [Vitis
           vinifera]
          Length = 272

 Score =  187 bits (476), Expect = 4e-45
 Identities = 100/175 (57%), Positives = 108/175 (61%)
 Frame = +1

Query: 1   DNLADHMVGNVYVQFTEEDQAASALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 180
           DNLADHM+GNVYVQF EE+QAA+AL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENN
Sbjct: 102 DNLADHMIGNVYVQFKEEEQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 161

Query: 181 CNRGGYCNFMHVKQIGRDLRKKLYGXXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXX 360
           CNRGGYCNFMHVK IGRDLR+KL+G                                   
Sbjct: 162 CNRGGYCNFMHVKLIGRDLRRKLFGRYSGYGRSRSRSRSLSPRYRRDSDR--RRSGDRGD 219

Query: 361 XXXXXXXSADRHGRYDSDGGRRRHGSPRHTXXXXXXXXXXXXXXXXXWNREREGR 525
                  S D+HG   SDGGRRRHGSPR +                 WNRERE R
Sbjct: 220 YRGNGRRSGDKHG---SDGGRRRHGSPRRSRSPVREGSEERRARIELWNREREER 271


>ref|XP_002307825.1| predicted protein [Populus trichocarpa] gi|222857274|gb|EEE94821.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  179 bits (454), Expect = 1e-42
 Identities = 95/176 (53%), Positives = 106/176 (60%), Gaps = 3/176 (1%)
 Frame = +1

Query: 1   DNLADHMVGNVYVQFTEEDQAASALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 180
           DNLADHM+GNVYVQF EEDQAA+AL++LQGRFYSGRPIIADFSPVTDFREATCRQ+EENN
Sbjct: 102 DNLADHMIGNVYVQFKEEDQAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENN 161

Query: 181 CNRGGYCNFMHVKQIGRDLRKKLYGXXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXX 360
           CNRGGYCNFMHVK IG+DLR+KL+G                        +          
Sbjct: 162 CNRGGYCNFMHVKLIGKDLRRKLFGRYRGYRVSRSRSRSVSPRRRDRDYD--------RR 213

Query: 361 XXXXXXXSADRHG---RYDSDGGRRRHGSPRHTXXXXXXXXXXXXXXXXXWNRERE 519
                    D  G   R D DGGR+RHGSPR +                 WNRERE
Sbjct: 214 ERDYRDRDRDYRGNGRRNDRDGGRKRHGSPRRSRSPVREGSEERRARIEQWNRERE 269


>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 272

 Score =  176 bits (445), Expect = 2e-41
 Identities = 96/175 (54%), Positives = 103/175 (58%), Gaps = 2/175 (1%)
 Frame = +1

Query: 1   DNLADHMVGNVYVQFTEEDQAASALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 180
           DNLADHM+GNVYVQF EEDQAA+AL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENN
Sbjct: 102 DNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 161

Query: 181 CNRGGYCNFMHVKQIGRDLRKKLYG--XXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXX 354
           CNRGGYCNFMHVK IGRDLR+KL+G                          +        
Sbjct: 162 CNRGGYCNFMHVKLIGRDLRRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRD 221

Query: 355 XXXXXXXXXSADRHGRYDSDGGRRRHGSPRHTXXXXXXXXXXXXXXXXXWNRERE 519
                    S DRH        RRRHGSPR +                 WNRERE
Sbjct: 222 RDYRGNGRRSGDRH-------DRRRHGSPRRSRSPVREGSEERRARIEQWNRERE 269


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
           sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
           splicing factor U2af small subunit B-like [Cucumis
           sativus]
          Length = 276

 Score =  175 bits (443), Expect = 3e-41
 Identities = 96/177 (54%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
 Frame = +1

Query: 1   DNLADHMVGNVYVQFTEEDQAASALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 180
           DNLADHM+GNVYVQF EEDQAA+AL+ALQGRFYSGRPIIADFSPVTDFREATCRQ+EENN
Sbjct: 102 DNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENN 161

Query: 181 CNRGGYCNFMHVKQIGRDLRKKLYGXXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXX 360
           CNRGGYCNFMHVK IG+DLR+KL+G                                   
Sbjct: 162 CNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRASRSRSRSLSPRNRKEHDR--RERDYRDR 219

Query: 361 XXXXXXXSADRHGRYDSDGGRRRHGSPR----HTXXXXXXXXXXXXXXXXXWNRERE 519
                  S +RH   D DGGRRR GSPR     +                 WNRERE
Sbjct: 220 DYRGNGRSKERH---DRDGGRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNRERE 273


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  172 bits (436), Expect = 2e-40
 Identities = 93/175 (53%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
 Frame = +1

Query: 1   DNLADHMVGNVYVQFTEEDQAASALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 180
           DNLADHM+GNVYV F EEDQAA+AL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENN
Sbjct: 102 DNLADHMIGNVYVLFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENN 161

Query: 181 CNRGGYCNFMHVKQIGRDLRKKLYGXXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXX 360
           CNRGGYCNFMHVK IGRDLR+KL+G                        +          
Sbjct: 162 CNRGGYCNFMHVKLIGRDLRRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRD 221

Query: 361 XXXXXXXSAD--RHGRYDSDGGRRRHGSPRHTXXXXXXXXXXXXXXXXXWNRERE 519
                    +  R+ +YD +GGR+RHGS                     WNRERE
Sbjct: 222 RDRDRDYRGNGRRNDKYDREGGRKRHGS------TVREGSEERRARIEQWNRERE 270