BLASTX nr result

ID: Coptis25_contig00013211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013211
         (1491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-42
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-37
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-35
ref|XP_002510983.1| conserved hypothetical protein [Ricinus comm...   134   8e-29
ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-28

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  177 bits (449), Expect = 6e-42
 Identities = 124/378 (32%), Positives = 188/378 (49%), Gaps = 29/378 (7%)
 Frame = -2

Query: 1439 LPDDTWVEVMCRLPP-KHMVRFKLVSKSWNMLISDVCIPKITSS-----ITGLLVPTGFG 1278
            LPDD  VE++CR+   KH++R K V KSWN LI+D C+PKI++S        L    GFG
Sbjct: 25   LPDDVLVEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPLHGFIYLAKKIGFG 84

Query: 1277 GPDSAWHLACINQAERMNSWSFMESCFRLLPCIPCPDHFLDSSNGFLLFVDPLSGIFYVC 1098
             P   +    I  A       F++S   LLP  P    FLD  NG LLFV+  +  +YVC
Sbjct: 85   KPYIDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYYVC 144

Query: 1097 NPSTEQCIAVPRSLENHNPVSANLIID---HPHFKIVYL----LRGPFRMNIYSSETRRW 939
            NP+T+ C+A+PR     N + A L  D    PH+++V       R P R+ ++SSET  W
Sbjct: 145  NPATKHCVAIPRDFMLENIIFAALAFDPSTSPHYRVVCFDYSESRPPVRLQVFSSETGNW 204

Query: 938  TRHIRLELPLVDDSVLEARWTSRLIFLDGFLYDISLSGHLLKVVIKRLSASAIKLP-KIV 762
            T +   E P    S  + +     I+LDG LY IS S H++   + R ++ AI+LP K  
Sbjct: 205  TGN---ETPF-GYSNKKCKVVKHCIYLDGALYCISTSKHIICFDLNRGNSRAIELPEKER 260

Query: 761  QGKSALGCIGVSKGSLHYAWNDPETYQTMVWMLD---KSD-WVLKHTLSLRDFAEYQVPC 594
               +  GC+G  +G  H  + D        W+L+   K+D W L H +++    +Y    
Sbjct: 261  LDPNGSGCVGQWRG--HLCYTDLVGTAFYFWLLEDRCKNDRWTLVHNINV----DYLGKL 314

Query: 593  ILDDSSLLAV-----------CAFHPTSDVVYLAHKVGIFCYHFGREKLEFVYKVRSGTT 447
             L   S++ +            A HPTSDV++      +  YH   ++L+ +Y+ +    
Sbjct: 315  WLQRDSMITIGRFGKISSFRPFALHPTSDVIFFGTPGVMLSYHLEDKRLKLIYRTKKDRL 374

Query: 446  ISSTQVLIVPFSRNLATL 393
            I   Q+++ P++  L  L
Sbjct: 375  ILMGQLMVFPYTPCLVNL 392


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  163 bits (413), Expect = 1e-37
 Identities = 125/394 (31%), Positives = 193/394 (48%), Gaps = 45/394 (11%)
 Frame = -2

Query: 1439 LPDDTWVEVMCRLPPKHMVRFKLVSKSWNMLISDVCIPKITSSITGLLVPTGF------- 1281
            LPDD  VE++CRLP K ++R K+VSK+W+ LIS+VC P  +++      P+GF       
Sbjct: 5    LPDDMIVEILCRLPVKVVMRLKVVSKAWHRLISNVCAPLFSAAAAA--HPSGFLFLCSFQ 62

Query: 1280 --GG----------PDSAWHLACINQAERMNSWSFMESCFRLLPCIPCPDHFLDSSNGFL 1137
              GG          PD      C+ Q +      F++S   +LP +   DH+ D  NG L
Sbjct: 63   IIGGLGYFAAYASYPDVR---DCVGQTD-----GFVDSYACMLPFMLSSDHYFDCCNGLL 114

Query: 1136 LFV-----DPLSGIFYVCNPSTEQCIAVPRSLENHNPVSANLIID---HPHFKIVYLL-- 987
            LFV     + L   ++VCN +T QC+A+P       P +A +  D    PH+K+V  +  
Sbjct: 115  LFVRREQREALPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVVRFIYL 174

Query: 986  ----RGPFRMNIYSSETRRWTRH---IRLELPLVDDSVLEARWTSRLIFLDGFLYDIS-L 831
                  P +++I+SS+T +W R    +  ELPL      +     R I+LDG +Y +S +
Sbjct: 175  EEKTSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLSFV 234

Query: 830  SGHLLKVVIKRLSASAIKLPKIVQGKSALGC---IGVSKGSLHYAWNDPETYQTMVWMLD 660
              +L++  +   S  AI+LP     K+A  C   IG+S+GSL+Y+ +D       +W+L+
Sbjct: 235  VNYLIRFDLNAPSDVAIELPH----KNAAACHGFIGMSRGSLYYSNHDESGLMISIWLLE 290

Query: 659  ---KSD--WVLKHTLSLRDFAEYQVPCILDDSSLLAVCAFHPTSDVVYLAHKVGIFCYHF 495
               K D  W L H +S+ D    + P   +        A HP SD+++L     +  Y  
Sbjct: 291  DRCKRDPFWKLTHRISV-DSLTSKYPDGRNSGFHFHTYAIHPASDIIFLGKPNMVLSYDL 349

Query: 494  GREKLEFVYKVRSGTTISSTQVLIVPFSRNLATL 393
               K E V+ + SG  ISS Q  +  +S   A L
Sbjct: 350  KSNKSEEVFTLSSGLEISSGQHFVHLYSPCYAVL 383


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  156 bits (394), Expect = 2e-35
 Identities = 117/386 (30%), Positives = 187/386 (48%), Gaps = 37/386 (9%)
 Frame = -2

Query: 1439 LPDDTWVEVMCRLPPKHMVRFKLVSKSWNMLISDVCIPKITSSI----TGLLVPTGFGGP 1272
            LPD+  VE++ +LP K ++R K+VSK+W+ LIS+VC P  +++     +G L    F   
Sbjct: 5    LPDNIIVEILYQLPVKVVMRLKVVSKTWHRLISNVCAPLFSAAAAAHPSGFLFLCSFQII 64

Query: 1271 DSAWHLA----------CINQAERMNSWSFMESCFRLLPCIPCPDHFLDSSNGFLLFV-- 1128
                + A          C+ Q +      F++S   +LP +   DH+ D  NG LLFV  
Sbjct: 65   GGLGYFAAYASYPDVHDCVGQTD-----GFVDSYACMLPFMLSSDHYFDCCNGLLLFVRR 119

Query: 1127 ---DPLSGIFYVCNPSTEQCIAVPRSLENHNPVSANLIID---HPHFKIVYLL------R 984
               + L   ++VCN +T QC+A+P       P +A +  D    PH+K+V  +       
Sbjct: 120  EQREDLPHYYFVCNTTTRQCVAIPNPRPRTAPFAAAIAYDPAKSPHYKVVRFIYLEEKTS 179

Query: 983  GPFRMNIYSSETRRWTRH---IRLELPLVDDSVLEARWTSRLIFLDGFLYDIS-LSGHLL 816
             P +++I+SS+T +W R    +  ELPL      +     R I+LDG +Y +S +  +L+
Sbjct: 180  CPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLSFVVNYLI 239

Query: 815  KVVIKRLSASAIKLPKIVQGKSALGCIGVSKGSLHYAWNDPETYQTMVWMLD---KSD-- 651
            +  +   S  AI+LP         G IG+S+GSL+Y+  D       +W+L+   K D  
Sbjct: 240  RFDLNAPSDVAIELPH-KNAADRHGFIGMSRGSLYYSNQDESGLMISIWLLEDRCKRDPF 298

Query: 650  WVLKHTLSLRDFAEYQVPCILDDSSLLAVCAFHPTSDVVYLAHKVGIFCYHFGREKLEFV 471
            W L H +S+ D    + P + +        A HP SD+++L     +  Y     K E V
Sbjct: 299  WKLTHRISV-DSLTSKYPDVRNSGFHFHTYAIHPASDIIFLGKPNMVLSYDHKSNKSEEV 357

Query: 470  YKVRSGTTISSTQVLIVPFSRNLATL 393
            + + SG  ISS Q  +  +S   A L
Sbjct: 358  FTLSSGLEISSGQHFVHLYSPCYAVL 383


>ref|XP_002510983.1| conserved hypothetical protein [Ricinus communis]
            gi|223550098|gb|EEF51585.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 323

 Score =  134 bits (336), Expect = 8e-29
 Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 20/339 (5%)
 Frame = -2

Query: 1433 DDTWVEVMCRLPPKHMVRFKLVSKSWNMLISDVCIPKITSSITGLLVPTGFGGPDSAWHL 1254
            DD  +E++ +LP + + RFK VSK+W+  I D CIPK+  S+   +   G        H+
Sbjct: 10   DDLMLEIVLKLPMRSLARFKCVSKTWHSRIQDFCIPKLLQSLQLQVSSIG-----REHHV 64

Query: 1253 ACINQAERMNSWSFMESCFRLLPCIPCPDHFLDSSNGFLLFVDPLSGIFYVCNPSTEQCI 1074
              I+    + S S     F   P + C  H LD  NG LL +      + VCNP T+Q +
Sbjct: 65   HYIDNTRVLYSCSL----FLPRPILAC--HLLDCCNG-LLLLWVCDKEYVVCNPVTKQYV 117

Query: 1073 A----VPRSLENHNPVSANLIID---HPHFKIVYLLRGPFRMNIYSSETRRWTRHIRLEL 915
            +    VPR+      ++A L  D    PH+K+V       R+ ++SS++  W   ++ EL
Sbjct: 118  SLKLLVPRNQVTGLLINAALAFDPSISPHYKVVLFDSRNNRLLVFSSKSWSW-NPLKYEL 176

Query: 914  PLVDDSVLEARWTSRLIFLDGFLYDISLSGHLLKVVI--KRLSASAIKLPKIVQGKSALG 741
                D +   RW    I+  G +Y +S SGH++K  I  +++++  ++  K+ +    + 
Sbjct: 177  ---QDVLSILRWDKESIYFCGAIYKLSKSGHVVKFSIDEEKVASDRVRAIKLPKYAPEMR 233

Query: 740  CIGVSKGSLHYAWNDPETYQTMVWML-----DKSDWVLKHTLSLRDFAEYQVPCILDDSS 576
            C GVS GSLHYA  D    Q  +W+L     D+ +WVLK+T+S +   +        D  
Sbjct: 234  CYGVSNGSLHYANVDDGNLQ--IWVLNGSIGDECEWVLKYTVSCQTIGK--------DRG 283

Query: 575  LLAV--CAFHPTSDVVYLAHKVG----IFCYHFGREKLE 477
            + +V  CA HP SD+++L    G    ++ Y F  + LE
Sbjct: 284  IYSVHPCAIHPFSDIIFLGCDGGKYPNVYYYDFSNQTLE 322


>ref|XP_002310986.1| predicted protein [Populus trichocarpa] gi|222850806|gb|EEE88353.1|
            predicted protein [Populus trichocarpa]
          Length = 531

 Score =  133 bits (335), Expect = 1e-28
 Identities = 116/405 (28%), Positives = 180/405 (44%), Gaps = 46/405 (11%)
 Frame = -2

Query: 1466 STKGCTNLVLPDDTWVEVMCRLPP-KHMVRFKLVSKSWNMLISDVCIPKITSS--ITGLL 1296
            S   C    LPDD  VE++CR+   KH++R K V K WN LI     PKI+ S  + G +
Sbjct: 16   SCASCFCSSLPDDVLVEILCRVTDRKHLIRLKSVCKCWNNLI-----PKISDSSPLRGFI 70

Query: 1295 VPTGFGGPDSAWHLACINQAERMNSW--------------SFMESCFRLLPCIPCPDHFL 1158
                       +H   ++  E    +               F++S   LLP       FL
Sbjct: 71   -----------YHALRVSSRETYIDYIPYALTPTVAPEPHEFIKSYSSLLPFDLARGDFL 119

Query: 1157 DSSNGFLLFVDPLSGIFYVCNPSTEQCIAVPRSLENHNPVSANLIID---HPHFKIVYL- 990
            D  NG LLFV+     +YVCNP T+QC+A+PR     N  +A+L  D    PH+++V   
Sbjct: 120  DCCNGLLLFVEGPIPRYYVCNPVTKQCVAIPRDFTLENICTASLAFDPFKSPHYRVVCFD 179

Query: 989  ---LRGPFRMNIYSSETRRWTRHIRLELPLVDDSVLEARWTSRLIFLDGFLYDISL---- 831
               L+ P ++ ++SSET  WT    ++         ++R     I+LDG LY  +     
Sbjct: 180  YSKLKPPQKLRVFSSETGSWT----IQETAFGYGSKKSRLAKHCIYLDGVLYRQTASKQI 235

Query: 830  ------SGHLLKVVIKRLSASAIKLP-KIVQGKSALGCIGVSKGSLHYAWNDPETYQTMV 672
                  S  LL   + R ++ AI+LP K     +  GCIG+S+   H  ++D        
Sbjct: 236  DSKQIDSKRLLCFDLNRGNSRAIELPEKERLAPNDYGCIGLSR--RHLCYSDLVGTALHF 293

Query: 671  WMLD----KSDWVLKHTLSLRDFAEYQVPCI-------LDDSSLLAVCAFHPTSDVVYLA 525
            W+L+       W L H + + DF    V  +           S L   A HPTS+V++L 
Sbjct: 294  WLLEDRCKNGRWTLIHNIKV-DFLGKHVHRLDRITIARFGKISALRPFALHPTSEVIFLG 352

Query: 524  HKVGIFCYHFGREKLEFVYKVRSGTTISSTQVLIVPFSRNLATLD 390
             +  +  YH   +++E +Y+ +    I   Q+ + P++  L   D
Sbjct: 353  TRGAMLSYHPKDKRVELIYRRKKDRQIIKGQISVFPYTLCLPCSD 397


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