BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012649
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001119398.1| F-box/kelch-repeat protein [Arabidopsis thal...    74   5e-11
gb|ABR18051.1| unknown [Picea sitchensis]                              69   2e-09
ref|XP_002863944.1| hypothetical protein ARALYDRAFT_494961 [Arab...    68   3e-09
ref|XP_002863077.1| F-box/Kelch-repeat protein At5g49000 [Arabid...    68   3e-09
dbj|BAB08887.1| unnamed protein product [Arabidopsis thaliana]         63   8e-08

>ref|NP_001119398.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75170771|sp|Q9FI70.1|FK122_ARATH RecName:
           Full=F-box/kelch-repeat protein At5g49000
           gi|10177190|dbj|BAB10324.1| unnamed protein product
           [Arabidopsis thaliana] gi|119360043|gb|ABL66750.1|
           At5g49000 [Arabidopsis thaliana]
           gi|332008372|gb|AED95755.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 372

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
 Frame = -1

Query: 910 VAFDSKIYFIGGMSDDCYSSKVFIFDPATNTWKEGAPLNHPRAFPTVVAIGRRIYVFGCG 731
           VA  S IY IGG  ++  SSKV I D  ++TW E   +   R +P    +  +IYV G G
Sbjct: 126 VAIGSNIYAIGGSIENAPSSKVSILDCRSHTWHEAPSMRMKRNYPAANVVDGKIYVAG-G 184

Query: 730 TKQMDISIEQWAECYDLDSDAWKFLPSPPQEVFDNRIVNFQA-VYEHRNQIILWGIIGNP 554
            ++ D S  +W E +D+ +  W+F+ SP  E F  R +  +  +Y          I G+ 
Sbjct: 185 LEEFDSS--KWMEVFDIKTQTWEFVLSPLAERFIYRSLVIEGEIY----------IFGDK 232

Query: 553 VYSYNYATEKWICFGS-QISTVPIMCYHMVVVEDVLFWHYCGHIYSYHLIKNEW 395
           V +Y    ++W   G  Q   + +  +   V+++VL+ +  G I  Y   K  W
Sbjct: 233 VVTYKPKEDRWGGVGEHQSMDLGLFFHSYCVIDNVLYCYRPGGIKWYESEKRSW 286


>gb|ABR18051.1| unknown [Picea sitchensis]
          Length = 374

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
 Frame = -1

Query: 895 KIYFIGGMSDDCYSSKVFIFDPATNTWKEGAPLNHPRAFPTVVAIGRRIYVF-GCGTKQM 719
           +++ IGG+ +   S+ V  +DP+ N W+  A L  PR  P V +IG +IYV  GCG    
Sbjct: 124 RLFSIGGLVNSATSADVSAYDPSLNRWECLASLKLPRYEPAVASIGGKIYVMGGCGVDSS 183

Query: 718 DISIEQWAECYDLDSDAWKFLPSPPQEVFDNRIVNFQAVYEHRNQIILWGIIG---NPV- 551
           D     WAE YD +   W  L  P  E  ++      AV   +   + +G +G   +PV 
Sbjct: 184 D-----WAEVYDPELGLWTSLSIPSLEFLNDGFCRDCAVVNGKLFGMCYGGLGFVFDPVL 238

Query: 550 -----YSYNYATEKWICFGSQI--STVPIMCYHMVVVEDVLFWHYCGHIYSYHLIKNEWI 392
                 S +   E+  C G Q+  +T   +     VV+ +LF +  G I  Y    N W+
Sbjct: 239 STITTVSSSDPYERSPCNGIQVLFATWKKLTQKAAVVKGILFAYLEGKIRGYDFEHNRWL 298

Query: 391 FL 386
            L
Sbjct: 299 AL 300


>ref|XP_002863944.1| hypothetical protein ARALYDRAFT_494961 [Arabidopsis lyrata subsp.
           lyrata] gi|297309779|gb|EFH40203.1| hypothetical protein
           ARALYDRAFT_494961 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
 Frame = -1

Query: 910 VAFDSKIYFIGGMSDDCYSSKVFIFDPATNTWKEGAPLNHPRAFPTVVAIGRRIYVFGCG 731
           VA  S IY IGG  ++  SS+V I D  ++TW E   +   R +P    +  +IYV G G
Sbjct: 90  VAVGSNIYAIGGSIENAPSSRVSILDCRSHTWHEAPSMRMKRNYPAANVVDGKIYVAG-G 148

Query: 730 TKQMDISIEQWAECYDLDSDAWKFLPSPPQEVFDNR-IVNFQAVYEHRNQIILWGIIGNP 554
            +  D S  +W E +D  +  W+F+  P  E F  R +V    +Y          I G+ 
Sbjct: 149 LEDFDSS--KWMEVFDTKTQTWEFVLCPLAERFVYRSLVIDGEIY----------IFGDK 196

Query: 553 VYSYNYATEKWICFGSQISTVPIMCYH-MVVVEDVLFWHYCGHIYSYHLIKNEWIFLYQL 377
           V +Y    ++W   G   S    + +H   V+++VL+ +  G I  Y   K  W  L  L
Sbjct: 197 VVTYKPKEDRWGDEGEHQSMDLGLYFHSYCVIDNVLYCYRPGGIKWYESEKRSWRKLRGL 256

Query: 376 EN-----SKLVRVKPY 344
           +      S  VR+  Y
Sbjct: 257 KGLSKLASSCVRLADY 272


>ref|XP_002863077.1| F-box/Kelch-repeat protein At5g49000 [Arabidopsis lyrata subsp.
           lyrata] gi|297308888|gb|EFH39336.1| F-box/Kelch-repeat
           protein At5g49000 [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
 Frame = -1

Query: 910 VAFDSKIYFIGGMSDDCYSSKVFIFDPATNTWKEGAPLNHPRAFPTVVAIGRRIYVFGCG 731
           VA  S IY IGG  ++  SS+V I D  ++TW E   +   R +P    +  +IYV G G
Sbjct: 125 VAVGSNIYAIGGSIENAPSSRVSILDCRSHTWHEAPSMRMKRNYPAANVVDGKIYVAG-G 183

Query: 730 TKQMDISIEQWAECYDLDSDAWKFLPSPPQEVFDNR-IVNFQAVYEHRNQIILWGIIGNP 554
            +  D S  +W E +D  +  W+F+  P  E F  R +V    +Y          I G+ 
Sbjct: 184 LEDFDSS--KWMEVFDTKTQTWEFVLCPLAERFVYRSLVIDGEIY----------IFGDK 231

Query: 553 VYSYNYATEKWICFGSQISTVPIMCYH-MVVVEDVLFWHYCGHIYSYHLIKNEWIFLYQL 377
           V +Y    ++W   G   S    + +H   V+++VL+ +  G I  Y   K  W  L  L
Sbjct: 232 VVTYKPKEDRWGDEGEHQSMDLGLYFHSYCVIDNVLYCYRPGGIKWYESEKRSWRKLRGL 291

Query: 376 EN-----SKLVRVKPY 344
           +      S  VR+  Y
Sbjct: 292 KGLSKLASNCVRLADY 307


>dbj|BAB08887.1| unnamed protein product [Arabidopsis thaliana]
          Length = 395

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 37/87 (42%), Positives = 52/87 (59%)
 Frame = -1

Query: 910 VAFDSKIYFIGGMSDDCYSSKVFIFDPATNTWKEGAPLNHPRAFPTVVAIGRRIYVFGCG 731
           VA  S+IY IGG  +   SS V IFD  +NTW++G  +   R+ P  V I +RIYV   G
Sbjct: 125 VAVGSEIYVIGGHFNR--SSSVRIFDCRSNTWRDGPNMTVARSDPVAVLIDQRIYVL--G 180

Query: 730 TKQMDISIEQWAECYDLDSDAWKFLPS 650
            ++MD S + W E +D+ +  W+ LPS
Sbjct: 181 GREMDES-DDWFEVFDIKTQTWRALPS 206