BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012260
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulat...   228   4e-79
ref|XP_002326753.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-76
ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulat...   219   3e-76
ref|XP_002304360.1| predicted protein [Populus trichocarpa] gi|2...   216   6e-76
ref|XP_004146109.1| PREDICTED: 26S proteasome non-ATPase regulat...   219   5e-75

>ref|XP_002275168.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           isoform 1 [Vitis vinifera]
          Length = 386

 Score =  228 bits (582), Expect(2) = 4e-79
 Identities = 114/147 (77%), Positives = 128/147 (87%)
 Frame = +1

Query: 1   VDSLSETXXXXXXXXXXXXXXXGDNVYNFAELLSHPIIKSLLGTKVEWIYYILQAFNAGD 180
           V+SLSET               GDN+YNF ELL+HPIIKSLLGTKVEW+YYILQAFN+GD
Sbjct: 190 VESLSETFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGD 249

Query: 181 LVRYQELCQVHRAALISQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSVIAEHT 360
           LVRYQELC+VH AAL +QPALV+NEKKLLEKINILCLMEIIFSRPSEDRTIPL++IAE T
Sbjct: 250 LVRYQELCRVHNAALSAQPALVQNEKKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERT 309

Query: 361 KLSIEEVEFLLMRSLSVHLIEGIIDQV 441
           KLS+E+VE+LLM+SLSVHLIEGIIDQV
Sbjct: 310 KLSVEDVEYLLMKSLSVHLIEGIIDQV 336



 Score = 94.4 bits (233), Expect(2) = 4e-79
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 521 DGTVHISWVQPRVLGIPQIKSLRDKLDNWLDKVHNTVLSVEAETPDLVAA 670
           +GTVH+SWVQPRVLGIPQIKSLRD+LDNW+DKVH  +LSVEAETPDLVA+
Sbjct: 337 EGTVHVSWVQPRVLGIPQIKSLRDRLDNWVDKVHTALLSVEAETPDLVAS 386


>ref|XP_002326753.1| predicted protein [Populus trichocarpa] gi|222834075|gb|EEE72552.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  218 bits (556), Expect(2) = 2e-76
 Identities = 111/147 (75%), Positives = 124/147 (84%)
 Frame = +1

Query: 1   VDSLSETXXXXXXXXXXXXXXXGDNVYNFAELLSHPIIKSLLGTKVEWIYYILQAFNAGD 180
           V+SLS++               GDN+YNF ELL+HPIIKSLLGT+VEW+YYILQAFN+GD
Sbjct: 190 VESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTQVEWLYYILQAFNSGD 249

Query: 181 LVRYQELCQVHRAALISQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSVIAEHT 360
           LVRYQELC+VH A L +QPALV+NE KLLEKINILCLMEIIFSRPSEDRTIPL VIAE T
Sbjct: 250 LVRYQELCRVHNAPLKAQPALVQNEPKLLEKINILCLMEIIFSRPSEDRTIPLKVIAERT 309

Query: 361 KLSIEEVEFLLMRSLSVHLIEGIIDQV 441
           KLSIE+VE LLM+SLSVHLIEGIIDQV
Sbjct: 310 KLSIEDVEHLLMKSLSVHLIEGIIDQV 336



 Score = 95.5 bits (236), Expect(2) = 2e-76
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 521 DGTVHISWVQPRVLGIPQIKSLRDKLDNWLDKVHNTVLSVEAETPDLVAA 670
           +GTVH+SWVQPRVLGIPQIKSLRD+LDNWLDKVH  +LSVEAETPDLVA+
Sbjct: 337 EGTVHVSWVQPRVLGIPQIKSLRDRLDNWLDKVHTALLSVEAETPDLVAS 386


>ref|XP_003631488.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           isoform 2 [Vitis vinifera]
          Length = 400

 Score =  219 bits (557), Expect(2) = 3e-76
 Identities = 114/161 (70%), Positives = 128/161 (79%), Gaps = 14/161 (8%)
 Frame = +1

Query: 1   VDSLSETXXXXXXXXXXXXXXXGDNVYNFAELLSHPIIKSLLGTKVEWIYYILQAFNAGD 180
           V+SLSET               GDN+YNF ELL+HPIIKSLLGTKVEW+YYILQAFN+GD
Sbjct: 190 VESLSETFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGD 249

Query: 181 LVRYQELCQVHRAALISQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSVIAEHT 360
           LVRYQELC+VH AAL +QPALV+NEKKLLEKINILCLMEIIFSRPSEDRTIPL++IAE T
Sbjct: 250 LVRYQELCRVHNAALSAQPALVQNEKKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERT 309

Query: 361 KLSIEEVEFLLMRSLS--------------VHLIEGIIDQV 441
           KLS+E+VE+LLM+SLS              VHLIEGIIDQV
Sbjct: 310 KLSVEDVEYLLMKSLSRSKILHWLKLGLLQVHLIEGIIDQV 350



 Score = 94.4 bits (233), Expect(2) = 3e-76
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = +2

Query: 521 DGTVHISWVQPRVLGIPQIKSLRDKLDNWLDKVHNTVLSVEAETPDLVAA 670
           +GTVH+SWVQPRVLGIPQIKSLRD+LDNW+DKVH  +LSVEAETPDLVA+
Sbjct: 351 EGTVHVSWVQPRVLGIPQIKSLRDRLDNWVDKVHTALLSVEAETPDLVAS 400


>ref|XP_002304360.1| predicted protein [Populus trichocarpa] gi|222841792|gb|EEE79339.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  216 bits (551), Expect(2) = 6e-76
 Identities = 109/147 (74%), Positives = 126/147 (85%)
 Frame = +1

Query: 1   VDSLSETXXXXXXXXXXXXXXXGDNVYNFAELLSHPIIKSLLGTKVEWIYYILQAFNAGD 180
           V+SLS++               GDN+YNF ELL+HPIIKSLLGT+VEW+YYILQAFN+GD
Sbjct: 190 VESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTQVEWLYYILQAFNSGD 249

Query: 181 LVRYQELCQVHRAALISQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSVIAEHT 360
           LVRYQELC+VH  AL +QPALV+NE+KLLEKINILCLMEIIFSRPSE+RTIPL+VIAE T
Sbjct: 250 LVRYQELCRVHNTALRAQPALVQNEQKLLEKINILCLMEIIFSRPSENRTIPLNVIAERT 309

Query: 361 KLSIEEVEFLLMRSLSVHLIEGIIDQV 441
           KLSIE+VE LL++SLSVHLIEGIIDQV
Sbjct: 310 KLSIEDVEHLLIKSLSVHLIEGIIDQV 336



 Score = 95.5 bits (236), Expect(2) = 6e-76
 Identities = 43/50 (86%), Positives = 48/50 (96%)
 Frame = +2

Query: 521 DGTVHISWVQPRVLGIPQIKSLRDKLDNWLDKVHNTVLSVEAETPDLVAA 670
           +GTVH+SWVQPRVLGIPQIKSLRD+LDNWLDKVH  +LSVEAETPDLVA+
Sbjct: 337 EGTVHVSWVQPRVLGIPQIKSLRDRLDNWLDKVHTALLSVEAETPDLVAS 386


>ref|XP_004146109.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 13-like
           [Cucumis sativus] gi|449509507|ref|XP_004163608.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           13-like [Cucumis sativus]
          Length = 386

 Score =  219 bits (558), Expect(2) = 5e-75
 Identities = 112/147 (76%), Positives = 122/147 (82%)
 Frame = +1

Query: 1   VDSLSETXXXXXXXXXXXXXXXGDNVYNFAELLSHPIIKSLLGTKVEWIYYILQAFNAGD 180
           V+SLS++               GDN+YNF ELL HPIIKSL GTKVEW+YYILQAFN+GD
Sbjct: 190 VESLSDSFKLDLAFDLSLSALLGDNIYNFGELLGHPIIKSLSGTKVEWLYYILQAFNSGD 249

Query: 181 LVRYQELCQVHRAALISQPALVENEKKLLEKINILCLMEIIFSRPSEDRTIPLSVIAEHT 360
           LVRYQELCQVH AAL +QPALV+NEKKLLEKINILCLMEIIFSRPSEDRTIPL VI E T
Sbjct: 250 LVRYQELCQVHNAALRAQPALVDNEKKLLEKINILCLMEIIFSRPSEDRTIPLKVIEERT 309

Query: 361 KLSIEEVEFLLMRSLSVHLIEGIIDQV 441
           KLS E+VE LLM+SLSVHLIEGIIDQV
Sbjct: 310 KLSTEDVEHLLMKSLSVHLIEGIIDQV 336



 Score = 89.7 bits (221), Expect(2) = 5e-75
 Identities = 40/50 (80%), Positives = 47/50 (94%)
 Frame = +2

Query: 521 DGTVHISWVQPRVLGIPQIKSLRDKLDNWLDKVHNTVLSVEAETPDLVAA 670
           +GTVH+SWVQPRVLGI QIKSLRD+LDNW++KVH  +LSVEAETPDLVA+
Sbjct: 337 EGTVHVSWVQPRVLGIQQIKSLRDRLDNWVEKVHTALLSVEAETPDLVAS 386