BLASTX nr result

ID: Coptis25_contig00012029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012029
         (3960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250...   216   3e-53
ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|2...   208   8e-51
ref|XP_003534205.1| PREDICTED: uncharacterized protein LOC100799...   186   4e-44
ref|XP_002514277.1| conserved hypothetical protein [Ricinus comm...   181   1e-42
ref|XP_003529991.1| PREDICTED: uncharacterized protein LOC100817...   179   4e-42

>ref|XP_002284247.1| PREDICTED: uncharacterized protein LOC100250827 [Vitis vinifera]
          Length = 360

 Score =  216 bits (551), Expect = 3e-53
 Identities = 134/319 (42%), Positives = 158/319 (49%), Gaps = 10/319 (3%)
 Frame = +3

Query: 2811 RPDFDGSIDQHVMHAGSVSPLHQRKLDDRYRSDFDTSSRPHXXXXXXXXXXXXXXXDFXX 2990
            R D  G    + + AGS SP+ +R  D RY S+FD S                   +   
Sbjct: 50   RSDRFGDGPGYRIRAGSSSPVRRRNPDHRYNSEFDHSGGLPRSRGFGSERDPGRYRNHSP 109

Query: 2991 XXXXXXXXXXXXXXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNFARR 3170
                            +  GFG G  R++G+ RN+ NV PR+GDWVCP   CGNLNFARR
Sbjct: 110  PYGRGRGGGRSFGRGLDGPGFGPGPIRSEGI-RNNPNVRPREGDWVCPDPLCGNLNFARR 168

Query: 3171 EYCNKCNRPRIGAGGSPRRNYLGPP-------RFSGHPLDRSPVRGGLNXXXXXXXXXXX 3329
            E CN CNR R G G SPRR + GPP       RFSG P+DRSP  G              
Sbjct: 169  EQCNNCNRYREGPGESPRRGFPGPPPPHPPPRRFSGPPMDRSP--GRTMNGYRSPPRGWA 226

Query: 3330 XXXXXEFRDG-PPHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERGRD 3506
                 EF  G P H RH GRFPD ++RRDR +YP            P PPDWG R+RGRD
Sbjct: 227  RDGPREFGGGAPSHRRHDGRFPDHNMRRDRLDYPEDDYRERNKFDRPAPPDWGHRDRGRD 286

Query: 3507 GFFNG-RRAYDARNEXXXXXXXXXXXXXXDRWAHQVRERSRSPMMGG-PLKDQRQDSYVD 3680
             FFN  R+ Y+ R                 RW   VR RSRSP+ GG PLKD R+D Y+ 
Sbjct: 287  SFFNNERKGYERR----PPSPPPPPLPPRGRWGRDVRARSRSPVRGGPPLKDYRRDMYMG 342

Query: 3681 RGRGPRWGLPRDRFDGHPY 3737
            RGR  R G+ RDRF G PY
Sbjct: 343  RGRDDRHGIRRDRF-GEPY 360


>ref|XP_002331165.1| predicted protein [Populus trichocarpa] gi|222873248|gb|EEF10379.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  208 bits (530), Expect = 8e-51
 Identities = 120/299 (40%), Positives = 146/299 (48%), Gaps = 8/299 (2%)
 Frame = +3

Query: 2847 MHAGSVSPLHQRKLDDRYRSDFDTSSRPHXXXXXXXXXXXXXXXDFXXXXXXXXXXXXXX 3026
            + AGS SP+ +R  D RY SDFD S  P                D               
Sbjct: 33   LRAGSGSPVRRRDADRRYSSDFDNSGAPPRGRDFSNGRDRGRFRDSSPPYARGRGGGRPL 92

Query: 3027 XXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNFARREYCNKCNRPRIG 3206
               F+  GFG G  R +G++RN+ NV PR+GDW+C    CGNLNFARREYCN C RPR  
Sbjct: 93   GRGFDGPGFGPGPLRGEGVSRNNPNVRPREGDWICSDPLCGNLNFARREYCNNCKRPRYR 152

Query: 3207 AGGSPRRNYLGPP-------RFSGHPLDRSPVRGGLNXXXXXXXXXXXXXXXXEFRDGPP 3365
             GGSPRR Y GPP       RF G PLD SP R  +N                    GPP
Sbjct: 153  PGGSPRRGYPGPPPPHAPPRRFPGPPLDLSPGR-TMNGYRSPPRGWSRDGPRDFGPGGPP 211

Query: 3366 HIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERGRDGFFNGRRAYDARN 3545
              R GGRF D  +RR+R +YP            P+P DWG ++RGRDG FN R+ ++ R 
Sbjct: 212  PPRQGGRFSDHDMRRERSDYPDDEYRVRNKFDRPMPMDWGHKDRGRDGLFNERKGFERR- 270

Query: 3546 EXXXXXXXXXXXXXXDRWAHQVRERSRSPMMGG-PLKDQRQDSYVDRGRGPRWGLPRDR 3719
                            RW    R+RSRSP+ G  P K+ RQD Y++RGR  R  + RDR
Sbjct: 271  -PPSPPLPPPSLPQRGRWGRDGRDRSRSPIRGAPPPKEFRQDMYMERGRDDRHPVGRDR 328


>ref|XP_003534205.1| PREDICTED: uncharacterized protein LOC100799651 [Glycine max]
          Length = 369

 Score =  186 bits (472), Expect = 4e-44
 Identities = 116/318 (36%), Positives = 150/318 (47%), Gaps = 9/318 (2%)
 Frame = +3

Query: 2802 DRYRPDFDGSIDQHVMHAGSVSPLHQRKLDDRYRSDFDTSSRPHXXXXXXXXXXXXXXXD 2981
            DRY PD  G    + + AGS SP+H+R  D R+ SD++   R                 D
Sbjct: 59   DRY-PDEPG----YRIRAGSSSPVHRRDADHRFGSDYNNMPRSRGYGGGRDPGRYR---D 110

Query: 2982 FXXXXXXXXXXXXXXXXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNF 3161
                              F+  GF  G  R +G  RN+ NV PR+GDW+CP   C NLNF
Sbjct: 111  PSPSYGRGRVGGRPMGRAFDGPGFVSGLARGEGNNRNNPNVRPREGDWICPDPLCNNLNF 170

Query: 3162 ARREYCNKCNRPRIGAGGSPRRNYLGPP-------RFSGHPLDRSPVRGGLNXXXXXXXX 3320
            ARR++CN CNR R     SPRR Y  PP       RF G P+DRSP R  LN        
Sbjct: 171  ARRDHCNSCNRSRNAPARSPRRAYPAPPPLHAPPRRFPGPPIDRSPER-TLNGYRSPPRG 229

Query: 3321 XXXXXXXXEFRDGPPHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERG 3500
                          P +RH G+FPDPH+RR+R ++             P PPDW  R+RG
Sbjct: 230  LARNGPREYGSAALPPLRHEGKFPDPHLRRERMDFIEDAYRGRNKFDRPPPPDWDNRDRG 289

Query: 3501 RDGFFNGRRAYDARN-EXXXXXXXXXXXXXXDRWAHQVRERSRSPMMGG-PLKDQRQDSY 3674
            RDGF +  + ++ R                  RWA  VR+RSRSP+ GG P K+ R+D++
Sbjct: 290  RDGFSDEGKGFERRPLSPPPPLLPSLPHHRGGRWARDVRQRSRSPIRGGPPPKEYRRDTF 349

Query: 3675 VDRGRGPRWGLPRDRFDG 3728
            + R    R G+ RDR  G
Sbjct: 350  MHRATDDRRGMGRDRIGG 367


>ref|XP_002514277.1| conserved hypothetical protein [Ricinus communis]
            gi|223546733|gb|EEF48231.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 346

 Score =  181 bits (460), Expect = 1e-42
 Identities = 103/253 (40%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
 Frame = +3

Query: 2802 DRYRPDFDGSIDQHVMHAGSVSPLHQRKLDDRYRSDFDTSSRPHXXXXXXXXXXXXXXXD 2981
            DRY  D       + +HAGSVSP  +R  D RY SD+D S  P                D
Sbjct: 60   DRYSDD-----PGYRIHAGSVSPARRRDADHRYNSDYDHSGGPPRGREFGSGRDSGRFRD 114

Query: 2982 FXXXXXXXXXXXXXXXXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNF 3161
                              F+  GFG G  R +GM RN+ NV PR+GDW+C    C NLNF
Sbjct: 115  SSPPYARGRVGGRPPGRGFDGPGFGPGPLRGEGMGRNNPNVRPREGDWICSDPLCNNLNF 174

Query: 3162 ARREYCNKCNRPRIGAGGSPRRNYLGPP------RFSGHPLDRSPVRGGLNXXXXXXXXX 3323
            ARREYCN C RPR G GGSPRR Y GPP      RF G PLD SP R  +N         
Sbjct: 175  ARREYCNNCKRPRYGPGGSPRRGYPGPPHPHPPRRFPGPPLDISPGR-TMNGFRSPPRGW 233

Query: 3324 XXXXXXXEFRDGPPHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPPDWGERERGR 3503
                       GPP  RHGGRF D  IRR R ++P            P+P +WG R+RGR
Sbjct: 234  ARDGPRDFGPGGPPPPRHGGRFSDHDIRRGRPDFPEDEYRGRNKFDRPMPMEWGHRDRGR 293

Query: 3504 DGFFNGRRAYDAR 3542
            D  F+ R+ ++ R
Sbjct: 294  DNVFHDRKGFERR 306


>ref|XP_003529991.1| PREDICTED: uncharacterized protein LOC100817587 [Glycine max]
          Length = 363

 Score =  179 bits (455), Expect = 4e-42
 Identities = 120/329 (36%), Positives = 153/329 (46%), Gaps = 20/329 (6%)
 Frame = +3

Query: 2802 DRYRPDFDGSIDQHVMHAGSVSPLHQRKLDDRYRSDFDTSSRPHXXXXXXXXXXXXXXXD 2981
            DRY PD  G    + + AGS SP+H+R  D R+ SD++  SR                  
Sbjct: 60   DRY-PDEPG----YRIRAGSSSPVHRRDADRRFASDYNNLSRSRGYGGGRDPGRYRDPSP 114

Query: 2982 FXXXXXXXXXXXXXXXXDFNVRGFGRGSFRNDGMTRNSANVAPRDGDWVCPALSCGNLNF 3161
                                 R  G G  R +G  RN+ NV PR+GDW+CP   C NLNF
Sbjct: 115  ------------PYGRGRVGGRPMGSGLARGEGNNRNNPNVRPREGDWICPDPLCNNLNF 162

Query: 3162 ARREYCNKCNRPRIGAGGSPRRNYLGPP-------RFSGHPLDRSPVRGGLNXXXXXXXX 3320
            ARR++CN CNR R     SPRR++  PP       RF G  +DRSP R  LN        
Sbjct: 163  ARRDHCNSCNRSRNAPARSPRRSFPAPPPLHAPPRRFPGPLIDRSPER-TLNGYRSPRGL 221

Query: 3321 XXXXXXXXEFRDGP--------PHIRHGGRFPDPHIRRDRQEYPXXXXXXXXXXXXPVPP 3476
                      RDGP        P +RH GRFPDPH+RR+R ++             P P 
Sbjct: 222  A---------RDGPREYGSAALPPLRHEGRFPDPHVRRERMDFIEDAYRGRNKFDRPPPL 272

Query: 3477 DWGERERGRDGFFNGRRAYDARN-EXXXXXXXXXXXXXXDRWAHQVRERSRSPMMGG-PL 3650
            DW  R+RGRDGF + R+ ++ R                  RWA  VRERSRSP+ GG P 
Sbjct: 273  DWDNRDRGRDGFSDERKGFERRPLSPPVPFLPSLPHHRGGRWARDVRERSRSPIRGGPPP 332

Query: 3651 KDQRQDSYVDRGRG---PRWGLPRDRFDG 3728
            K+ R+D+++ R R     R G+ RDR  G
Sbjct: 333  KEYRRDTFMHRARDDRHDRHGMGRDRIGG 361


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