BLASTX nr result

ID: Coptis25_contig00012024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00012024
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299295.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-52
ref|XP_002518171.1| chaperonin-60kD, ch60, putative [Ricinus com...   208   3e-52
ref|XP_003632036.1| PREDICTED: chaperonin CPN60-2, mitochondrial...   207   7e-52
ref|XP_002285608.1| PREDICTED: chaperonin CPN60-2, mitochondrial...   207   7e-52
ref|XP_003591643.1| Chaperonin CPN60-like protein [Medicago trun...   207   7e-52

>ref|XP_002299295.1| predicted protein [Populus trichocarpa] gi|222846553|gb|EEE84100.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  209 bits (533), Expect = 1e-52
 Identities = 104/117 (88%), Positives = 114/117 (97%)
 Frame = -1

Query: 353 SRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGPKGRNVIIEQS 174
           +RS+TN +GSRLSWSRNYAAKDIRFGV+ARA ML+GVEELADAVKVTMGPKGRNV+IEQS
Sbjct: 15  ARSSTNQIGSRLSWSRNYAAKDIRFGVEARAGMLKGVEELADAVKVTMGPKGRNVVIEQS 74

Query: 173 YGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCATVLTRAIF 3
           YG+PKVTKDGVTVAKSIEFKDK+KNVGASLVKQVANATN+ AGDGTTCATVLT+AIF
Sbjct: 75  YGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDAAGDGTTCATVLTQAIF 131


>ref|XP_002518171.1| chaperonin-60kD, ch60, putative [Ricinus communis]
           gi|223542767|gb|EEF44304.1| chaperonin-60kD, ch60,
           putative [Ricinus communis]
          Length = 574

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/117 (87%), Positives = 116/117 (99%)
 Frame = -1

Query: 353 SRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGPKGRNVIIEQS 174
           +R++T+ +GSRLSWSRNYAAKDI+FGV+ARALML+GVEELA+AVKVTMGPKGRNV+IEQS
Sbjct: 15  ARNSTHQIGSRLSWSRNYAAKDIKFGVEARALMLKGVEELAEAVKVTMGPKGRNVVIEQS 74

Query: 173 YGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCATVLTRAIF 3
           +G+PKVTKDGVTVAKSIEFKDKIKN+GASLVKQVANATN+VAGDGTTCATVLTRAIF
Sbjct: 75  FGAPKVTKDGVTVAKSIEFKDKIKNIGASLVKQVANATNDVAGDGTTCATVLTRAIF 131


>ref|XP_003632036.1| PREDICTED: chaperonin CPN60-2, mitochondrial isoform 2 [Vitis
           vinifera]
          Length = 571

 Score =  207 bits (527), Expect = 7e-52
 Identities = 101/117 (86%), Positives = 116/117 (99%)
 Frame = -1

Query: 353 SRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGPKGRNVIIEQS 174
           +R++T+ +GSRL+WSRNYAAKDIRFGV+ARALML+GVEELADAV+VTMGPKGRNV++EQS
Sbjct: 15  ARNSTHQIGSRLNWSRNYAAKDIRFGVEARALMLKGVEELADAVRVTMGPKGRNVVLEQS 74

Query: 173 YGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCATVLTRAIF 3
           +G+PKVTKDGVTVAKSIEFKD+IKNVGASLVKQVANATN+VAGDGTTCATVLTRAIF
Sbjct: 75  FGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIF 131


>ref|XP_002285608.1| PREDICTED: chaperonin CPN60-2, mitochondrial isoform 1 [Vitis
           vinifera] gi|297741894|emb|CBI33329.3| unnamed protein
           product [Vitis vinifera]
          Length = 575

 Score =  207 bits (527), Expect = 7e-52
 Identities = 101/117 (86%), Positives = 116/117 (99%)
 Frame = -1

Query: 353 SRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGPKGRNVIIEQS 174
           +R++T+ +GSRL+WSRNYAAKDIRFGV+ARALML+GVEELADAV+VTMGPKGRNV++EQS
Sbjct: 15  ARNSTHQIGSRLNWSRNYAAKDIRFGVEARALMLKGVEELADAVRVTMGPKGRNVVLEQS 74

Query: 173 YGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCATVLTRAIF 3
           +G+PKVTKDGVTVAKSIEFKD+IKNVGASLVKQVANATN+VAGDGTTCATVLTRAIF
Sbjct: 75  FGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIF 131


>ref|XP_003591643.1| Chaperonin CPN60-like protein [Medicago truncatula]
           gi|92882357|gb|ABE86688.1| GroEL-like chaperone, ATPase
           [Medicago truncatula] gi|355480691|gb|AES61894.1|
           Chaperonin CPN60-like protein [Medicago truncatula]
          Length = 574

 Score =  207 bits (527), Expect = 7e-52
 Identities = 100/117 (85%), Positives = 115/117 (98%)
 Frame = -1

Query: 353 SRSNTNLVGSRLSWSRNYAAKDIRFGVDARALMLRGVEELADAVKVTMGPKGRNVIIEQS 174
           +RSN N +GSR++WSRNYAAK+I+FGV+ARALML+GVEELA+AVKVTMGPKGRNV+IEQS
Sbjct: 15  ARSNANQIGSRVAWSRNYAAKEIKFGVEARALMLKGVEELAEAVKVTMGPKGRNVVIEQS 74

Query: 173 YGSPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNNVAGDGTTCATVLTRAIF 3
           +G+PKVTKDGVTVAKSIEFKDK+KN+GASLVKQVANATN+VAGDGTTCATVLTRAIF
Sbjct: 75  FGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIF 131


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