BLASTX nr result

ID: Coptis25_contig00011787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011787
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90579.1| hypothetical protein [Solanum tuberosum]                74   4e-11
ref|XP_003540344.1| PREDICTED: uncharacterized protein LOC100817...    72   1e-10
ref|XP_002517995.1| conserved hypothetical protein [Ricinus comm...    72   2e-10
ref|XP_003633339.1| PREDICTED: uncharacterized protein LOC100853...    69   1e-09
ref|XP_003543357.1| PREDICTED: uncharacterized protein LOC100305...    67   4e-09

>gb|AFW90579.1| hypothetical protein [Solanum tuberosum]
          Length = 96

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 17/98 (17%)
 Frame = -2

Query: 625 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHGKLKQS----------GLRSL-G 479
           MSYL RVW+A +VAVV  H  D G  KL +G++S  HGK + S          GLR + G
Sbjct: 1   MSYLNRVWVATTVAVVNSHA-DHGQ-KLKSGIQSLNHGKKRFSSSVACGADVAGLRPMSG 58

Query: 478 MFGSD---FI---EREDKVKQADESVQRVMYLSCWGQS 383
           M GSD   FI   + E+K KQ DES+++VMYLSCWG S
Sbjct: 59  MLGSDVGGFIGGGKGEEKRKQTDESLRQVMYLSCWGPS 96


>ref|XP_003540344.1| PREDICTED: uncharacterized protein LOC100817529 [Glycine max]
          Length = 93

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 14/94 (14%)
 Frame = -2

Query: 625 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHGKLKQ------SGLRSL-GMFGS 467
           MSYL RVWMAA+VAV QGH TD G  K    L S  H + +       S LR L G+ GS
Sbjct: 1   MSYLNRVWMAATVAVAQGH-TDPG-HKCKTALTSIHHNRSRLFSGGALSDLRPLSGVVGS 58

Query: 466 DFI-------EREDKVKQADESVQRVMYLSCWGQ 386
           D         + E++V+QAD+S+++VMYLSCWGQ
Sbjct: 59  DVAGSVAGSSDVENRVRQADDSLRKVMYLSCWGQ 92


>ref|XP_002517995.1| conserved hypothetical protein [Ricinus communis]
           gi|223542977|gb|EEF44513.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 50/93 (53%), Positives = 59/93 (63%), Gaps = 13/93 (13%)
 Frame = -2

Query: 625 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHGKLKQ------SGLRSL-GMFGS 467
           MSYL RV MAASVAVVQGH  DQG     +GLKS Q+GK         S LR L G+FG+
Sbjct: 1   MSYLNRVCMAASVAVVQGH-PDQGW---KSGLKSLQNGKRTLFSGGDVSELRPLSGVFGA 56

Query: 466 DFI------EREDKVKQADESVQRVMYLSCWGQ 386
           D        E +D+ KQ DE+ +RVMYL+CWGQ
Sbjct: 57  DRSGVPGSPEGQDRGKQNDETFRRVMYLNCWGQ 89


>ref|XP_003633339.1| PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera]
          Length = 90

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
 Frame = -2

Query: 625 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHGKLKQSG------LRSLGMFGSD 464
           MSYL RVWMA SVAVV GH  DQG  K  +G + FQ GK + S       +R +   G  
Sbjct: 1   MSYLNRVWMATSVAVVNGHA-DQGC-KWKSGARPFQIGKRRFSSGGDSADIRPVSGAGDP 58

Query: 463 FI-----EREDKVKQADESVQRVMYLSCWGQS 383
            +      RE++  QADES+++VMY +CWGQS
Sbjct: 59  DLGGLVGNREERRTQADESLRQVMYFNCWGQS 90


>ref|XP_003543357.1| PREDICTED: uncharacterized protein LOC100305837 [Glycine max]
          Length = 93

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 14/94 (14%)
 Frame = -2

Query: 625 MSYLGRVWMAASVAVVQGHGTDQGLFKLSNGLKSFQHGKLK------QSGLRSL-GMFGS 467
           MSYL RVWMAA+VAV QGH TD G  K    L S  H + +       S LR L G+ G 
Sbjct: 1   MSYLNRVWMAATVAVAQGH-TDPG-HKCKTALNSIHHNRSRLFSGGALSDLRPLSGVVGP 58

Query: 466 DF-------IEREDKVKQADESVQRVMYLSCWGQ 386
           D         + +++V QAD+S+++VMY SCWGQ
Sbjct: 59  DVSGAAAGSSDAKNRVSQADDSLRKVMYFSCWGQ 92


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