BLASTX nr result

ID: Coptis25_contig00011541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011541
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...    75   7e-12
ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trich...    74   1e-11
ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trich...    74   2e-11
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...    72   4e-11
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...    72   4e-11

>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/66 (54%), Positives = 44/66 (66%)
 Frame = -2

Query: 200 GFGKTTLAQLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLH 21
           G GKTTLAQL +N+  + T FE KIWVCVSEPFD  R+A+ I+EQ  G  P +V  Q L 
Sbjct: 207 GIGKTTLAQLAFNDAEVTTHFEKKIWVCVSEPFDQVRIAKAILEQLEGRAPDLVELQSLL 266

Query: 20  QLLCNS 3
           Q +  S
Sbjct: 267 QRVSES 272


>ref|XP_002318903.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859576|gb|EEE97123.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 906

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/66 (54%), Positives = 43/66 (65%)
 Frame = -2

Query: 200 GFGKTTLAQLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLH 21
           G GKTTLAQL +N+  +   FE KIWVCVSEPFD  R+A+ IIEQ  G P  +V  Q L 
Sbjct: 186 GMGKTTLAQLAFNDAEVTAHFEKKIWVCVSEPFDEVRIAKAIIEQLEGSPTNLVELQSLL 245

Query: 20  QLLCNS 3
           Q +  S
Sbjct: 246 QRVSES 251


>ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832446|gb|EEE70923.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 742

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/66 (51%), Positives = 43/66 (65%)
 Frame = -2

Query: 200 GFGKTTLAQLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLH 21
           G GKTTLAQL Y +  +   FE KIWVCVSEPFD  R+A+ I+EQ  G  P ++  Q L 
Sbjct: 181 GIGKTTLAQLAYKDAEVTAHFEKKIWVCVSEPFDEVRIAKAILEQLEGSAPNLIELQSLL 240

Query: 20  QLLCNS 3
           Q++  S
Sbjct: 241 QMVSES 246


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/66 (53%), Positives = 43/66 (65%)
 Frame = -2

Query: 200 GFGKTTLAQLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLH 21
           G GKTTLAQL YN + I T FE +IWVCVS PFD   VA+ IIE  +G  P +V  +PL 
Sbjct: 233 GLGKTTLAQLAYNADEIKTYFEKRIWVCVSHPFDENTVAKAIIEDLSGAAPNLVELEPLC 292

Query: 20  QLLCNS 3
           + +  S
Sbjct: 293 KRISES 298


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = -2

Query: 200 GFGKTTLAQLVYNEETIATTFELKIWVCVSEPFDHERVAREIIEQATGEPPKVVGWQPLH 21
           G GKTTLAQL +N+  +   FE KIWVCVSEPFD  R+A+ I+EQ  G P  +V  Q L 
Sbjct: 207 GIGKTTLAQLAFNDSEVTAHFEKKIWVCVSEPFDEIRIAKAILEQLEGRPTNLVELQSLL 266

Query: 20  Q 18
           Q
Sbjct: 267 Q 267


Top