BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011350
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   115   2e-23
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   114   3e-23
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   108   2e-21
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   106   9e-21
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   106   9e-21

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score =  115 bits (287), Expect = 2e-23
 Identities = 89/270 (32%), Positives = 138/270 (51%), Gaps = 8/270 (2%)
 Frame = -2

Query: 904 KNLVDLDLWKVTLTNETIASIIVDCPL-EKLTLIYCDGFSCLNVCAPKLIMFFLYSPCGS 728
           KNL  LDL  VTL  +   ++I  CPL E+LTL+  DGF+ LN+ AP L+ F +      
Sbjct: 168 KNLKSLDLQHVTLAQDVFENLISSCPLLERLTLMNFDGFTNLNIDAPNLLFFDIGGKFED 227

Query: 727 IYFDNTPQLRIASIEMLPMMVGGIPLPRHLVTSRLDARLTGLV-------NVQELCIFKN 569
           I F+NT QL + SI        G+ L   +  SRL    + L+       +VQ L +   
Sbjct: 228 ISFENTFQLAVVSI--------GLYLNFEINQSRLHGGSSNLLKFFVHLPHVQRLEVQSY 279

Query: 568 FMEILAAHVIPERLCFTYHILTTMLLEMNFESLVENSTALCLFRSSPCLLTLHVTSDFSG 389
           F++ LA  V+P +L      L+ + + +NF  L E S +LCL RSSP L  L + +    
Sbjct: 280 FLKYLAVGVVPIKLPRPCIDLSYLSIRINFNDLKEISASLCLLRSSPNLQELEILARPEE 339

Query: 388 QHTLLGNGRFWESIPHEEIIFARLNNLVLSGFMGMKNEVSFVQFVLRCAVMLHTIRITWD 209
           Q  LL +   WE + +      +L  + + G  G+K E+ F+ F+L  + +L   R+T  
Sbjct: 340 QTVLLTHTYCWEDV-YFSCPVMQLRYVKIDGISGIKPELDFINFLLLHSPVLE--RMTVK 396

Query: 208 ATVEKGTERTGTLENMMQFRRASPRARVIF 119
                G E    ++ +++FRRAS +A +I+
Sbjct: 397 PVANVGLE---LMKELLRFRRASGQAEIIY 423


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  114 bits (285), Expect = 3e-23
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 4/266 (1%)
 Frame = -2

Query: 904 KNLVDLDLWKVTLTNETIASIIVDCPL-EKLTLIYCDGFSCLNVCAPKLIMFFLYSPCGS 728
           ++L  LDL  +TLT     ++I  CPL E+LTL+  DGF+ LN+ AP L  F +      
Sbjct: 167 RSLKSLDLQHITLTQNVFENLIFSCPLLERLTLMNFDGFTHLNINAPNLQFFDIGGVYDD 226

Query: 727 IYFDNTPQLRIASIEMLPMMVGGIPLPRHLVTSRLDARLTGLVNVQELCIFKNFMEILAA 548
           + F+NT QL + SI +  + V       H  +S+L      L +++ L +   F++ L+ 
Sbjct: 227 VTFENTFQLTLVSIGLY-VNVQNDRNVGHGSSSKLLRFFANLPHIRRLEVQSYFLKYLSI 285

Query: 547 HVIPERL---CFTYHILTTMLLEMNFESLVENSTALCLFRSSPCLLTLHVTSDFSGQHTL 377
             +P RL   CF  + L+   + +NF  L ENS ALCL RSSP +  L + +    Q +L
Sbjct: 286 GNVPSRLPKPCFDLNYLS---IRINFNDLEENSAALCLLRSSPNVQELEMLARPEEQTSL 342

Query: 376 LGNGRFWESIPHEEIIFARLNNLVLSGFMGMKNEVSFVQFVLRCAVMLHTIRITWDATVE 197
                FWE   H   +F +L  + + G  G++ E+ F+ F+L  + +L  + +   A+ +
Sbjct: 343 GTITNFWED-DHWNNLFGQLRLVRIVGISGIRCELDFMNFLLSNSPVLERMTVK-PASSD 400

Query: 196 KGTERTGTLENMMQFRRASPRARVIF 119
            G E    ++ +++FRRAS RA +I+
Sbjct: 401 GGWE---LIKELLRFRRASARAEIIY 423


>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  108 bits (270), Expect = 2e-21
 Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 9/271 (3%)
 Frame = -2

Query: 904 KNLVDLDLWKVTLTNETIASIIVDCPL-EKLTLIYCDGFSCLNVCAPKLIMFFLYSPCGS 728
           KNL  LDL  V+++     ++I  CPL E LTL   DGF+ +N+ AP L +  +      
Sbjct: 163 KNLKSLDLDHVSMSQYAFENLISSCPLLENLTLTELDGFTQINIHAPNLKVLDICGKFED 222

Query: 727 IYFDNTPQLRIASIEMLPMMVGGIPLPRHLVTSRLDARLTGLVN-------VQELCIFKN 569
           I FDNT QL    +++       + L      SRL    + L+N       +  L I   
Sbjct: 223 ISFDNTFQLDYVFVDL------SLYLNSESNQSRLHGSPSNLLNFFAHLHHIHGLVINGY 276

Query: 568 FMEILAAHVIPERLCFTYHILTTMLLEMNFESLVENSTALCLFRSSPCLLTLHVTSDFSG 389
           F++ LAA  +P +L      LT +   +NF    E STALC+FRSSP L  L++ +    
Sbjct: 277 FLKYLAAGAVPVKLPTPCINLTYLWFSINFYDFKEISTALCVFRSSPNLKELNIFAKHEK 336

Query: 388 QHTLLGNGRF-WESIPHEEIIFARLNNLVLSGFMGMKNEVSFVQFVLRCAVMLHTIRITW 212
           +  +L    F WE I  E  +  R+ ++ + G  G+K+E+ F++F+L  + +L  +R+  
Sbjct: 337 KTIVLAPAFFCWEDIFLEPSMLTRVRHVGIEGISGIKSELDFMRFLLLHSPVLEKMRVKP 396

Query: 211 DATVEKGTERTGTLENMMQFRRASPRARVIF 119
           +  V      +  +  +++F+RAS +A V++
Sbjct: 397 NFNV-----GSKLMSELLRFKRASAQAEVVY 422


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  106 bits (264), Expect = 9e-21
 Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 4/266 (1%)
 Frame = -2

Query: 904 KNLVDLDLWKVTLTNETIASIIVDCPL-EKLTLIYCDGFSCLNVCAPKLIMFFLYSPCGS 728
           +NL  LDL  VTL+ +   ++I  CPL E+LTL+  DGF+ LN+ AP L  F +      
Sbjct: 168 RNLKSLDLQHVTLSQDAFENLISTCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFED 227

Query: 727 IYFDNTPQLRIASIEMLPMMVGGIPLPRHLVTSRLDARLTGLVNVQELCIFKNFMEILAA 548
           I F NT QL + SI +            H  TS L   L  L  +Q L I   F++ LA 
Sbjct: 228 ISFKNTSQLAVVSIGLYVNFESSQGR-LHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLAL 286

Query: 547 HVIPERLCFTYHILTTMLLEMNFESLVENSTALCLFRSSPCLLTLHVTSDFSGQH-TLLG 371
             +P +L      L+ + + +NF    E S ALCLFRSSP L  L + +    Q   L  
Sbjct: 287 GAVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAH 346

Query: 370 NGRFWESIPHEEIIFARLNNLVLSGFMGMKNEVSFVQFVLRCAVMLH--TIRITWDATVE 197
           +   WE + + +    R+ ++ + G  G+K E+ F+ F+L  + +L   T++   +A+ E
Sbjct: 347 HADCWEDV-YLDWPVMRVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPALNASPE 405

Query: 196 KGTERTGTLENMMQFRRASPRARVIF 119
                   ++ +++ RRAS RA VI+
Sbjct: 406 -------LVKELLRLRRASGRAEVIY 424


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 660

 Score =  106 bits (264), Expect = 9e-21
 Identities = 87/266 (32%), Positives = 134/266 (50%), Gaps = 4/266 (1%)
 Frame = -2

Query: 904  KNLVDLDLWKVTLTNETIASIIVDCPL-EKLTLIYCDGFSCLNVCAPKLIMFFLYSPCGS 728
            +NL  LDL  VTL+ +   ++I  CPL E+LTL+  DGF+ LN+ AP L  F +      
Sbjct: 400  RNLKSLDLQHVTLSQDAFENLISTCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFED 459

Query: 727  IYFDNTPQLRIASIEMLPMMVGGIPLPRHLVTSRLDARLTGLVNVQELCIFKNFMEILAA 548
            I F NT QL + SI +            H  TS L   L  L  +Q L I   F++ LA 
Sbjct: 460  ISFKNTSQLAVVSIGLYVNFESSQGR-LHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLAL 518

Query: 547  HVIPERLCFTYHILTTMLLEMNFESLVENSTALCLFRSSPCLLTLHVTSDFSGQH-TLLG 371
              +P +L      L+ + + +NF    E S ALCLFRSSP L  L + +    Q   L  
Sbjct: 519  GAVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAH 578

Query: 370  NGRFWESIPHEEIIFARLNNLVLSGFMGMKNEVSFVQFVLRCAVMLH--TIRITWDATVE 197
            +   WE + + +    R+ ++ + G  G+K E+ F+ F+L  + +L   T++   +A+ E
Sbjct: 579  HADCWEDV-YLDWPVMRVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPALNASPE 637

Query: 196  KGTERTGTLENMMQFRRASPRARVIF 119
                    ++ +++ RRAS RA VI+
Sbjct: 638  -------LVKELLRLRRASGRAEVIY 656