BLASTX nr result

ID: Coptis25_contig00010481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010481
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305484.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-29
ref|XP_003522758.1| PREDICTED: uncharacterized protein LOC100793...   128   3e-27
ref|NP_001240932.1| uncharacterized protein LOC100813444 [Glycin...   121   3e-25
ref|XP_002529252.1| conserved hypothetical protein [Ricinus comm...   117   5e-24
ref|XP_004144833.1| PREDICTED: uncharacterized protein LOC101205...   115   2e-23

>ref|XP_002305484.1| predicted protein [Populus trichocarpa] gi|222848448|gb|EEE85995.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  134 bits (336), Expect = 6e-29
 Identities = 62/123 (50%), Positives = 82/123 (66%)
 Frame = -2

Query: 925 RTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLKVTPVV 746
           R +S SIFD F+LNPLPYPV          LG S++F+YE +VE TEE    +L V P+V
Sbjct: 5   RRRSDSIFDAFTLNPLPYPVLLILAVLSIFLGMSWFFSYEDMVETTEEQMGWILLVVPLV 64

Query: 745 LLILVRWLSSMDSPGWLFARSPYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVSYQSSFL 566
           L+++VRWLSSM++P  +F  SP+D++R THH P EG+SPWG           V +QS+FL
Sbjct: 65  LIVIVRWLSSMENPDMIFVMSPWDKRRRTHHRPSEGSSPWGVAAFIVLLLVLVKFQSTFL 124

Query: 565 DSW 557
           DSW
Sbjct: 125 DSW 127


>ref|XP_003522758.1| PREDICTED: uncharacterized protein LOC100793388 [Glycine max]
          Length = 130

 Score =  128 bits (322), Expect = 3e-27
 Identities = 64/130 (49%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
 Frame = -2

Query: 940 MAYGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLK 761
           M YG R+++SS+ D FSLNP+PYPV          LG S+Y +YE VVEA EE    +L 
Sbjct: 1   MGYG-RSRASSVLDGFSLNPVPYPVLLILSLILLFLGISWYLSYEEVVEAAEEQLGWMLL 59

Query: 760 VTPVVLLILVRWLSSMDSPGWLFAR-SPYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVS 584
            TPVVL+++VRWLSS+D+  W F   SP++R+R THH P EG+SPWG           + 
Sbjct: 60  ATPVVLILVVRWLSSVDTSEWFFFNSSPWERRRRTHHFPSEGSSPWGVAALILLVLVLLH 119

Query: 583 YQSSFLDSWF 554
           Y S+FLD+WF
Sbjct: 120 YHSTFLDAWF 129


>ref|NP_001240932.1| uncharacterized protein LOC100813444 [Glycine max]
           gi|255638336|gb|ACU19480.1| unknown [Glycine max]
          Length = 130

 Score =  121 bits (304), Expect = 3e-25
 Identities = 64/130 (49%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = -2

Query: 940 MAYGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLK 761
           MAYG R+++SS+ D F+LNPLPYPV          LG S+YF+YE VVE  E+    +L 
Sbjct: 1   MAYG-RSRASSVLDGFTLNPLPYPVLLILSLIFIFLGVSWYFSYEEVVETAEQQLGWLLF 59

Query: 760 VTPVVLLILVRWLSSMDSPGWLFARS-PYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVS 584
            TPVVL+++VRWLSSM++  W F+ S P +R+  TH    EG+SPWG           V 
Sbjct: 60  CTPVVLILIVRWLSSMENSYWFFSASLPGERRGRTHQGLSEGSSPWGVAALILVLLIMVQ 119

Query: 583 YQSSFLDSWF 554
           YQS+FLDSWF
Sbjct: 120 YQSNFLDSWF 129


>ref|XP_002529252.1| conserved hypothetical protein [Ricinus communis]
           gi|223531288|gb|EEF33130.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 110

 Score =  117 bits (294), Expect = 5e-24
 Identities = 57/99 (57%), Positives = 73/99 (73%)
 Frame = -2

Query: 934 YGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVLKVT 755
           YG R  ++SIFDVF+LNPLPYPV          LG S+YF+YE +VEA EE  S VL + 
Sbjct: 6   YGRR--NNSIFDVFTLNPLPYPVLLILAVISIFLGMSWYFSYEEMVEAAEEQMSWVLLII 63

Query: 754 PVVLLILVRWLSSMDSPGWLFARSPYDRQRATHHHPPEG 638
           P+V+L +VRWLSSM++P  LFA+SP++ +R THHHPPEG
Sbjct: 64  PLVILFVVRWLSSMENPDMLFAKSPWEWKRQTHHHPPEG 102


>ref|XP_004144833.1| PREDICTED: uncharacterized protein LOC101205041 [Cucumis sativus]
           gi|449507011|ref|XP_004162909.1| PREDICTED:
           uncharacterized LOC101205041 [Cucumis sativus]
          Length = 129

 Score =  115 bits (289), Expect = 2e-23
 Identities = 59/129 (45%), Positives = 81/129 (62%)
 Frame = -2

Query: 943 LMAYGSRTQSSSIFDVFSLNPLPYPVXXXXXXXXXXLGTSYYFNYESVVEATEENFSLVL 764
           + +Y +RT + SI D  SLNP PYPV          LG S++ +YES VEA E++ + +L
Sbjct: 1   MTSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDHINWIL 60

Query: 763 KVTPVVLLILVRWLSSMDSPGWLFARSPYDRQRATHHHPPEGTSPWGXXXXXXXXXXXVS 584
             TPV+L++LVR+LSS+D     F+ SP+DR+R THH P EGTSPWG           + 
Sbjct: 61  FATPVLLILLVRFLSSLDPT--FFSSSPWDRRRRTHHIPAEGTSPWGVAAFILLLLVLLQ 118

Query: 583 YQSSFLDSW 557
           +QSSF +SW
Sbjct: 119 FQSSFRESW 127


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