BLASTX nr result
ID: Coptis25_contig00010478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010478 (741 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326892.1| predicted protein [Populus trichocarpa] gi|2... 285 5e-75 ref|XP_002510349.1| peroxisomal biogenesis factor, putative [Ric... 285 7e-75 ref|XP_002281733.1| PREDICTED: peroxisomal membrane protein 11A ... 283 3e-74 ref|XP_002281759.1| PREDICTED: peroxisomal membrane protein 11A ... 279 4e-73 ref|XP_004160026.1| PREDICTED: peroxisomal membrane protein 11A-... 277 2e-72 >ref|XP_002326892.1| predicted protein [Populus trichocarpa] gi|222835207|gb|EEE73642.1| predicted protein [Populus trichocarpa] Length = 255 Score = 285 bits (730), Expect = 5e-75 Identities = 150/235 (63%), Positives = 173/235 (73%) Frame = -1 Query: 738 ERDFLNHLESYLAKRDGVDKLLKISRYASKIIXXXXXXXXXXXXXHRLKSFESSVGISRK 559 +RDFLNHLE YLAKRDGVDKLLKISRYA+KII RLKSFESSVG+SRK Sbjct: 21 QRDFLNHLEVYLAKRDGVDKLLKISRYATKIILASSVLPETLIVTKRLKSFESSVGLSRK 80 Query: 558 AFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGLIDKKNLYT 379 AFRLGKFVQD+NALR + F+SKQ+++L+ IAYGGEG+YYFVEQFVWL KSGLID K+ + Sbjct: 81 AFRLGKFVQDVNALRGSHFDSKQEIILSFIAYGGEGLYYFVEQFVWLAKSGLIDSKHSKS 140 Query: 378 LQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMXXXXXXXXXX 199 L KISAWAEF+GY GSI+LK RDLK + E E ESSVEIA+ RG G + Sbjct: 141 LGKISAWAEFVGYIGSISLKFRDLKKLSEDEVCLESSVEIAVTRGVGRQEEERRLWKLRE 200 Query: 198 XXXXXXXXXVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 34 VQD ADGLMA ADIRDG+G S P ++ AG+LSALISTHKNW+SC Sbjct: 201 KKLMKKLSIVQDFADGLMALADIRDGRGQFSGPLLVSCAGLLSALISTHKNWVSC 255 >ref|XP_002510349.1| peroxisomal biogenesis factor, putative [Ricinus communis] gi|223551050|gb|EEF52536.1| peroxisomal biogenesis factor, putative [Ricinus communis] Length = 261 Score = 285 bits (729), Expect = 7e-75 Identities = 147/236 (62%), Positives = 176/236 (74%) Frame = -1 Query: 741 KERDFLNHLESYLAKRDGVDKLLKISRYASKIIXXXXXXXXXXXXXHRLKSFESSVGISR 562 KE+DFLNHLE+YLAKRDGVDKLLKISRYASKII RLKSFESSVG+SR Sbjct: 26 KEKDFLNHLETYLAKRDGVDKLLKISRYASKIILASNTLPETLILTQRLKSFESSVGLSR 85 Query: 561 KAFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGLIDKKNLY 382 KAFRLGKFVQDIN++R + F++KQ+V+L++IAYGGEG+YYFVEQFVWL K+GLID K+ Sbjct: 86 KAFRLGKFVQDINSIRNSHFDTKQEVVLSIIAYGGEGLYYFVEQFVWLVKAGLIDGKHTK 145 Query: 381 TLQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMXXXXXXXXX 202 L KISAWAEF+GY GSI++K+RDLK + E E SS+E+A +RGNG+E Sbjct: 146 KLGKISAWAEFVGYIGSISIKLRDLKKLNENEVCLGSSIEVAAVRGNGFEEEEKRMRKLR 205 Query: 201 XXXXXXXXXXVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 34 QD ADGLMA ADIRDGKG S P +++ AG+LSALIST KNW+SC Sbjct: 206 EKKLMKKLSIAQDFADGLMALADIRDGKGRLSGPLWVSVAGLLSALISTRKNWVSC 261 >ref|XP_002281733.1| PREDICTED: peroxisomal membrane protein 11A [Vitis vinifera] Length = 260 Score = 283 bits (724), Expect = 3e-74 Identities = 148/234 (63%), Positives = 172/234 (73%) Frame = -1 Query: 735 RDFLNHLESYLAKRDGVDKLLKISRYASKIIXXXXXXXXXXXXXHRLKSFESSVGISRKA 556 RDFLNHLE+YLAKRDGVDKLLKISRYA++II RLKSFESSVG+SRKA Sbjct: 27 RDFLNHLEAYLAKRDGVDKLLKISRYATRIILASSLLPETLTLNRRLKSFESSVGVSRKA 86 Query: 555 FRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGLIDKKNLYTL 376 FRLGKFVQD+NALR F+SK+DV+L++IAYGGEG+Y F+EQFVW KSGLID K+ L Sbjct: 87 FRLGKFVQDLNALRNTCFDSKEDVILSIIAYGGEGLYMFIEQFVWFVKSGLIDAKHSRNL 146 Query: 375 QKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMXXXXXXXXXXX 196 QKISAWAEF+GY GSI+LK+RDLK I E E R S++EI++ RG Y+ Sbjct: 147 QKISAWAEFVGYIGSISLKIRDLKRINEDESRLLSTIEISISRGLKYDEEAKKIQKMKEK 206 Query: 195 XXXXXXXXVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 34 VQD ADGLMA ADIRDGKG S P ++SAG+LSALIS HKNWLSC Sbjct: 207 RLMKRLSIVQDLADGLMALADIRDGKGRLSGPLLMSSAGLLSALISAHKNWLSC 260 >ref|XP_002281759.1| PREDICTED: peroxisomal membrane protein 11A [Vitis vinifera] gi|302142451|emb|CBI19654.3| unnamed protein product [Vitis vinifera] Length = 260 Score = 279 bits (714), Expect = 4e-73 Identities = 147/235 (62%), Positives = 172/235 (73%) Frame = -1 Query: 738 ERDFLNHLESYLAKRDGVDKLLKISRYASKIIXXXXXXXXXXXXXHRLKSFESSVGISRK 559 +RDFLNHLE+YLAKRDGVDKLLKISRYA+KII RLKSFESSVG+SRK Sbjct: 26 DRDFLNHLEAYLAKRDGVDKLLKISRYATKIILASSLLPETLTLNRRLKSFESSVGVSRK 85 Query: 558 AFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGLIDKKNLYT 379 AFRLGKFVQD+NALR + F+SK+DV+L++IAYGGEG+Y FVEQFVW KSGLID K+ Sbjct: 86 AFRLGKFVQDLNALRNSCFDSKEDVILSIIAYGGEGLYMFVEQFVWFVKSGLIDAKHSRN 145 Query: 378 LQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMXXXXXXXXXX 199 LQKISAWA F+G+ GSI+LK+RDLK I E E R S++EI++ RG Y+ Sbjct: 146 LQKISAWAGFVGHIGSISLKIRDLKRINEDESRLLSTIEISISRGLKYDEEAKKIHKLKE 205 Query: 198 XXXXXXXXXVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 34 VQD ADGLMA ADIRDGKG S P ++SAG+LSAL S HKNWLSC Sbjct: 206 KRLMKRLSIVQDLADGLMALADIRDGKGRLSGPLLMSSAGLLSALTSAHKNWLSC 260 >ref|XP_004160026.1| PREDICTED: peroxisomal membrane protein 11A-like [Cucumis sativus] Length = 247 Score = 277 bits (708), Expect = 2e-72 Identities = 145/236 (61%), Positives = 167/236 (70%) Frame = -1 Query: 741 KERDFLNHLESYLAKRDGVDKLLKISRYASKIIXXXXXXXXXXXXXHRLKSFESSVGISR 562 K+RDF NHLE+YLAKRDGVDKLLKISRY +KII RLKSFESSVG+SR Sbjct: 12 KQRDFFNHLEAYLAKRDGVDKLLKISRYTTKIILSSSAISESHPLTQRLKSFESSVGVSR 71 Query: 561 KAFRLGKFVQDINALRTASFESKQDVLLNLIAYGGEGVYYFVEQFVWLGKSGLIDKKNLY 382 KAFRLGKF+QD+NALR + FES Q+ LL L+AYGGEG YYFVEQF+WL KSGLIDK++ Sbjct: 72 KAFRLGKFIQDLNALRNSHFESNQEFLLALLAYGGEGFYYFVEQFIWLAKSGLIDKRHSS 131 Query: 381 TLQKISAWAEFIGYFGSIALKVRDLKSICEAERRCESSVEIAMLRGNGYEMXXXXXXXXX 202 LQKISAWAE IGY GSI+LK RDL I E E ++S+EIA+ RG G+ Sbjct: 132 RLQKISAWAELIGYIGSISLKFRDLNRILEDEACLKASIEIAVNRGIGHREEEEKMKKLR 191 Query: 201 XXXXXXXXXXVQDCADGLMAFADIRDGKGLGSSPFFIASAGMLSALISTHKNWLSC 34 VQD ADG MA AD+RDG G S P I+ AG+LSALISTHKNW+SC Sbjct: 192 AKMLMKKLSIVQDFADGFMAVADVRDGNGRFSGPLLISFAGLLSALISTHKNWISC 247