BLASTX nr result

ID: Coptis25_contig00010474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010474
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95218.1| unknown [Populus trichocarpa]                          472   e-130
ref|XP_002890650.1| aspartate/glutamate/uridylate kinase family ...   469   e-130
ref|XP_002263763.1| PREDICTED: uncharacterized protein MJ0044 [V...   467   e-129
ref|XP_002512133.1| conserved hypothetical protein [Ricinus comm...   464   e-128
ref|XP_003613945.1| Glutamate 5-kinase [Medicago truncatula] gi|...   459   e-127

>gb|ABK95218.1| unknown [Populus trichocarpa]
          Length = 335

 Score =  472 bits (1214), Expect = e-130
 Identities = 243/333 (72%), Positives = 278/333 (83%), Gaps = 1/333 (0%)
 Frame = -2

Query: 1203 LRCIVKLGGAAITCKNKLEKINEENLGIVSSHLREVMRVSSSSGKVAGMDWSQRPGVSEI 1024
            +RCIVKLGGAAITCKN LEKINEEN+ IVSS LRE M   SSS KV GMDWS+RPG S I
Sbjct: 13   IRCIVKLGGAAITCKNDLEKINEENVEIVSSQLREAMITGSSSRKVLGMDWSKRPGKSGI 72

Query: 1023 SISPNEFNDQSVLDFSNFIVVHGAGSYGHFQASKSGVHKGGLQLPLVKAGFVATRISVTS 844
            S   ++F DQ+ LD S+F+VVHGAGS+GHFQASKSGVHKGGL  PLVKAGFVATRISVT+
Sbjct: 73   SCDADDFEDQN-LDSSSFVVVHGAGSFGHFQASKSGVHKGGLNKPLVKAGFVATRISVTT 131

Query: 843  LNLEIVRALAREGIPSVGMSPFASGWSTHERNISSADISQVAKAIDSGFVPVLHGDAVLD 664
            LNLEIVRALAREGIP++GMSPF+ GW+T ERN++SAD+S VA+AI+SGFVPVLHGDAVLD
Sbjct: 132  LNLEIVRALAREGIPTIGMSPFSCGWTTPERNMASADLSMVAQAINSGFVPVLHGDAVLD 191

Query: 663  DFQGCTILSGDVIIRHLAEFLKPEYVVFLTDVFGVYDRPPTDPDAVLLKEIXXXXXXXXX 484
            D QGCTILSGDVIIRHLA +LKPEYVVFLTDV GVYDRPP++P+AVLL+EI         
Sbjct: 192  DLQGCTILSGDVIIRHLAAYLKPEYVVFLTDVLGVYDRPPSEPNAVLLREI--------- 242

Query: 483  XXXXXXXXXAVDTDGNWSIVKPALQDMNK-VEFSVAPHDTTGGMVTKISEAAMIAKLGID 307
                     AV  DG+WS+VKP L+DM K VE +VA HDTTGGM TKISEAA+IAKLGID
Sbjct: 243  ---------AVSEDGSWSVVKPTLEDMKKQVETTVAAHDTTGGMATKISEAALIAKLGID 293

Query: 306  VYIVKAATSHSLRALKGDLKDDIPDDWLGTVIR 208
            VYIVKAAT+HS RAL G+++  +P+DWLGTVIR
Sbjct: 294  VYIVKAATTHSSRALSGEVRGALPEDWLGTVIR 326


>ref|XP_002890650.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297336492|gb|EFH66909.1|
            aspartate/glutamate/uridylate kinase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  469 bits (1207), Expect = e-130
 Identities = 235/339 (69%), Positives = 277/339 (81%), Gaps = 1/339 (0%)
 Frame = -2

Query: 1212 NNSLRCIVKLGGAAITCKNKLEKINEENLGIVSSHLREVMRVSSSSGKVAGMDWSQRPGV 1033
            + S+RCIVKLGGAAITCKN+LEKI++ENL +V+  LR+ M   S+S KV GMDWS+RPG 
Sbjct: 10   SRSIRCIVKLGGAAITCKNELEKIHDENLEVVACQLRQAMMEGSASSKVIGMDWSKRPGS 69

Query: 1032 SEISISPNEFNDQSVLDFSNFIVVHGAGSYGHFQASKSGVHKGGLQLPLVKAGFVATRIS 853
            SEIS   ++  DQ   +FS F+VVHGAGS+GHFQAS+SGVHKGGL+ P+VKAGFVATRIS
Sbjct: 70   SEISCDVDDLGDQESSEFSKFVVVHGAGSFGHFQASRSGVHKGGLEKPIVKAGFVATRIS 129

Query: 852  VTSLNLEIVRALAREGIPSVGMSPFASGWSTHERNISSADISQVAKAIDSGFVPVLHGDA 673
            VT+LNLEIVRALAREGIP++GMSPF+ GWST +R+++SAD+S VAK IDSGFVPVLHGDA
Sbjct: 130  VTNLNLEIVRALAREGIPTIGMSPFSCGWSTSKRDVASADLSTVAKTIDSGFVPVLHGDA 189

Query: 672  VLDDFQGCTILSGDVIIRHLAEFLKPEYVVFLTDVFGVYDRPPTDPDAVLLKEIXXXXXX 493
            VLD+  GCTILSGDVIIRHLA+ LKPEYVVFLTDV GVYDRPP++PDAVLLKEI      
Sbjct: 190  VLDNILGCTILSGDVIIRHLADHLKPEYVVFLTDVLGVYDRPPSEPDAVLLKEI------ 243

Query: 492  XXXXXXXXXXXXAVDTDGNWSIVKPALQDMN-KVEFSVAPHDTTGGMVTKISEAAMIAKL 316
                        AV  DG+W +V P L+  N KV++SVA HDTTGGM TKISEAAMIAKL
Sbjct: 244  ------------AVGEDGSWKVVNPVLEHTNKKVDYSVAAHDTTGGMETKISEAAMIAKL 291

Query: 315  GIDVYIVKAATSHSLRALKGDLKDDIPDDWLGTVIRSSR 199
            GIDVYIVKAAT+HS RAL GDL+D +P+DW GT+IR S+
Sbjct: 292  GIDVYIVKAATTHSQRALNGDLRDSVPEDWFGTIIRFSK 330


>ref|XP_002263763.1| PREDICTED: uncharacterized protein MJ0044 [Vitis vinifera]
            gi|296088284|emb|CBI36510.3| unnamed protein product
            [Vitis vinifera]
          Length = 340

 Score =  467 bits (1202), Expect = e-129
 Identities = 248/355 (69%), Positives = 285/355 (80%), Gaps = 11/355 (3%)
 Frame = -2

Query: 1230 GLVTLNNNS---------LRCIVKLGGAAITCKNKLEKINEENLGIVSSHLREVMRVSSS 1078
            G+   NNNS         +RCIVKLGGAAITCKN++EK+NEE++  VSS LR+ M    S
Sbjct: 4    GISRNNNNSNQILCPIKPIRCIVKLGGAAITCKNEIEKMNEESIEKVSSQLRQAMISGLS 63

Query: 1077 SGKVAGMDWSQRPGVSEISISPNEFNDQSVLDFSNFIVVHGAGSYGHFQASKSGVHKGGL 898
            S K+ GMDWS+RPG SE S + ++F+DQS+LD   FIVVHGAGS+GHFQASKSGVHKGGL
Sbjct: 64   SLKICGMDWSKRPGNSEASPTVDDFSDQSLLDSDRFIVVHGAGSFGHFQASKSGVHKGGL 123

Query: 897  QLPLVKAGFVATRISVTSLNLEIVRALAREGIPSVGMSPFASGWSTHERNISSADISQVA 718
              PLVKAGFVATRISVT+LNLEIVRALAREGIPS+GMSPF+ GW T ERN++SAD+S VA
Sbjct: 124  NQPLVKAGFVATRISVTTLNLEIVRALAREGIPSIGMSPFSCGWLTSERNVASADVSMVA 183

Query: 717  KAIDSGFVPVLHGDAVLDDFQGCTILSGDVIIRHLAEFLKPEYVVFLTDVFGVYDRPPTD 538
            KAIDSGFVPVLHGDAVLD+ Q CTILSGDVIIRHLA  LKPEYVVFLTDV GVYDRPPT+
Sbjct: 184  KAIDSGFVPVLHGDAVLDEAQDCTILSGDVIIRHLAAQLKPEYVVFLTDVLGVYDRPPTE 243

Query: 537  PDAVLLKEIXXXXXXXXXXXXXXXXXXAVDTDGNWSIVKPALQDMNK-VEFSVAPHDTTG 361
            P+AVLLKEI                  AV  DG+WS+VKP L++MNK VE +VA HDTTG
Sbjct: 244  PNAVLLKEI------------------AVSEDGSWSVVKPTLKEMNKQVEITVAAHDTTG 285

Query: 360  GMVTKISEAAMIAKLGIDVYIVKAATSHSLRALKGDLK-DDIPDDWLGTVIRSSR 199
            GMVTKI EAAMIAKLGIDVYIVKAAT  SLRAL+G+LK +++P++WLGTVIR  R
Sbjct: 286  GMVTKIWEAAMIAKLGIDVYIVKAATDDSLRALRGELKGNNVPEEWLGTVIRLLR 340


>ref|XP_002512133.1| conserved hypothetical protein [Ricinus communis]
            gi|223549313|gb|EEF50802.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 337

 Score =  464 bits (1195), Expect = e-128
 Identities = 238/333 (71%), Positives = 272/333 (81%), Gaps = 1/333 (0%)
 Frame = -2

Query: 1203 LRCIVKLGGAAITCKNKLEKINEENLGIVSSHLREVMRVSSSSGKVAGMDWSQRPGVSEI 1024
            +RCIVKLGGAAITCKN+LEK+NEENL IVSS L++ +   S S +V GMDWS R G SEI
Sbjct: 13   IRCIVKLGGAAITCKNELEKVNEENLEIVSSQLKKALIAGSGSQRVLGMDWSNRHGTSEI 72

Query: 1023 SISPNEFNDQSVLDFSNFIVVHGAGSYGHFQASKSGVHKGGLQLPLVKAGFVATRISVTS 844
            S   + F +Q+ LD  +F+VVHGAGS+GHFQASKSGVHKGGL  PLVKAGFVATRISVT+
Sbjct: 73   SCDVDNFQEQTSLDSCSFVVVHGAGSFGHFQASKSGVHKGGLSQPLVKAGFVATRISVTT 132

Query: 843  LNLEIVRALAREGIPSVGMSPFASGWSTHERNISSADISQVAKAIDSGFVPVLHGDAVLD 664
            LNLE+VR LAR+GIPSVGMSPF+ GWST +RN+ SAD+S VAKAI SGFVPVLHGDAVLD
Sbjct: 133  LNLEVVRILARDGIPSVGMSPFSCGWSTSQRNMESADLSMVAKAIGSGFVPVLHGDAVLD 192

Query: 663  DFQGCTILSGDVIIRHLAEFLKPEYVVFLTDVFGVYDRPPTDPDAVLLKEIXXXXXXXXX 484
            +FQGCTILSGDVIIRHLA +LKPE VVFLTDV GVYDRPP++P AVLL+EI         
Sbjct: 193  EFQGCTILSGDVIIRHLAAYLKPESVVFLTDVLGVYDRPPSEPGAVLLREI--------- 243

Query: 483  XXXXXXXXXAVDTDGNWSIVKPALQDM-NKVEFSVAPHDTTGGMVTKISEAAMIAKLGID 307
                     AV+ DG+WS+V P  Q+M N+VE +VA HDTTGGM TKISEAAMIAKLGID
Sbjct: 244  ---------AVNEDGSWSVVNPTRQNMNNQVEITVAAHDTTGGMETKISEAAMIAKLGID 294

Query: 306  VYIVKAATSHSLRALKGDLKDDIPDDWLGTVIR 208
            VYIVKAATSHSL+AL G+L+  IPDDWLGTVIR
Sbjct: 295  VYIVKAATSHSLKALSGELRGTIPDDWLGTVIR 327


>ref|XP_003613945.1| Glutamate 5-kinase [Medicago truncatula] gi|355515280|gb|AES96903.1|
            Glutamate 5-kinase [Medicago truncatula]
          Length = 324

 Score =  459 bits (1182), Expect = e-127
 Identities = 240/335 (71%), Positives = 267/335 (79%)
 Frame = -2

Query: 1203 LRCIVKLGGAAITCKNKLEKINEENLGIVSSHLREVMRVSSSSGKVAGMDWSQRPGVSEI 1024
            +RCIVKLGGAAITCKN+LEKIN+E L  VS  LR+ M  SS   K  GMDWS+RPG SEI
Sbjct: 12   IRCIVKLGGAAITCKNELEKINDEILHKVSEQLRQAMIASSQ--KPPGMDWSKRPGDSEI 69

Query: 1023 SISPNEFNDQSVLDFSNFIVVHGAGSYGHFQASKSGVHKGGLQLPLVKAGFVATRISVTS 844
              +P EF D    + S FIVVHGAGS+GHFQASKSGVHKG L  PLVK GFVATRISVT+
Sbjct: 70   CCNPEEFGDDFDAECSRFIVVHGAGSFGHFQASKSGVHKGQLNKPLVKGGFVATRISVTT 129

Query: 843  LNLEIVRALAREGIPSVGMSPFASGWSTHERNISSADISQVAKAIDSGFVPVLHGDAVLD 664
            LNLEIVRALAREGIPS+GMSPF+ GW T ER++SSAD+S VAKAIDSGF+PVLHGDAVLD
Sbjct: 130  LNLEIVRALAREGIPSIGMSPFSCGWITSERHVSSADLSPVAKAIDSGFIPVLHGDAVLD 189

Query: 663  DFQGCTILSGDVIIRHLAEFLKPEYVVFLTDVFGVYDRPPTDPDAVLLKEIXXXXXXXXX 484
            +  GCTILSGDVII HLA + KP+YVVFLTDV+GVYDRPPT+PDA+LLKEI         
Sbjct: 190  EILGCTILSGDVIISHLAAYSKPKYVVFLTDVYGVYDRPPTEPDAILLKEI--------- 240

Query: 483  XXXXXXXXXAVDTDGNWSIVKPALQDMNKVEFSVAPHDTTGGMVTKISEAAMIAKLGIDV 304
                     AV  DG+WS++KP LQ  N +E SVA HDTTGGM TKISEAAMIAKLGIDV
Sbjct: 241  ---------AVAEDGSWSVIKPKLQ--NSIELSVAAHDTTGGMKTKISEAAMIAKLGIDV 289

Query: 303  YIVKAATSHSLRALKGDLKDDIPDDWLGTVIRSSR 199
            YIVKAATSHSL+AL GDL   IPDDWLGTV+RSSR
Sbjct: 290  YIVKAATSHSLKALNGDLGSSIPDDWLGTVVRSSR 324


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