BLASTX nr result

ID: Coptis25_contig00010467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010467
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72155.1| hypothetical protein VITISV_019018 [Vitis vinifera]   210   4e-52
ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera] gi...   210   5e-52
gb|EEC74695.1| hypothetical protein OsI_10400 [Oryza sativa Indi...   207   5e-51
ref|XP_003561943.1| PREDICTED: crt homolog 1-like [Brachypodium ...   206   6e-51
ref|XP_002527366.1| conserved hypothetical protein [Ricinus comm...   206   6e-51

>emb|CAN72155.1| hypothetical protein VITISV_019018 [Vitis vinifera]
          Length = 478

 Score =  210 bits (535), Expect = 4e-52
 Identities = 104/156 (66%), Positives = 127/156 (81%)
 Frame = -2

Query: 1054 DAAKRLKGKPLDIFVVNSFGSGFQALFVLLFMPFLSNMKGIPFAELPSYLRSGAACFLNI 875
            DAA RLKGK LDIFVVNSFGSGFQALFVLL +P LSN +GIPF +LPSYL++GA CFLNI
Sbjct: 323  DAATRLKGKLLDIFVVNSFGSGFQALFVLLLLPLLSNFRGIPFPQLPSYLKAGAGCFLNI 382

Query: 874  GGNVTGCEGAPLLPLLFIFSNMAFNIALLNLVKISSAVIASLAATLAVPIAIYVLALPLP 695
            G N+ GC+GAPLLPLL++ +N+AFNI+LLNLVKISSAV+++LAA  +VPI+IYVL+LPLP
Sbjct: 383  GSNIPGCDGAPLLPLLYLATNIAFNISLLNLVKISSAVVSTLAAMASVPISIYVLSLPLP 442

Query: 694  YXXXXXXXXXXXXXXSVILVLGLILYNLPQFSRQDP 587
            Y               VIL+LGL+LYN+PQ ++Q P
Sbjct: 443  YLPQGASLSPFFLFGGVILLLGLLLYNIPQPAKQXP 478


>ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera]
            gi|302142085|emb|CBI19288.3| unnamed protein product
            [Vitis vinifera]
          Length = 422

 Score =  210 bits (534), Expect = 5e-52
 Identities = 104/156 (66%), Positives = 127/156 (81%)
 Frame = -2

Query: 1054 DAAKRLKGKPLDIFVVNSFGSGFQALFVLLFMPFLSNMKGIPFAELPSYLRSGAACFLNI 875
            DAA RLKGK LDIFVVNSFGSGFQALFVLL +P LSN +GIPF +LPSYL++GA CFLNI
Sbjct: 267  DAATRLKGKLLDIFVVNSFGSGFQALFVLLLLPLLSNFRGIPFPQLPSYLKAGAGCFLNI 326

Query: 874  GGNVTGCEGAPLLPLLFIFSNMAFNIALLNLVKISSAVIASLAATLAVPIAIYVLALPLP 695
            G N+ GC+GAPLLPLL++ +N+AFNI+LLNLVKISSAV+++LAA  +VPI+IYVL+LPLP
Sbjct: 327  GSNIPGCDGAPLLPLLYLATNIAFNISLLNLVKISSAVVSTLAAMASVPISIYVLSLPLP 386

Query: 694  YXXXXXXXXXXXXXXSVILVLGLILYNLPQFSRQDP 587
            Y               VIL+LGL+LYN+PQ ++Q P
Sbjct: 387  YLPQGASLSPFFLFGGVILLLGLLLYNIPQPAKQAP 422


>gb|EEC74695.1| hypothetical protein OsI_10400 [Oryza sativa Indica Group]
          Length = 423

 Score =  207 bits (526), Expect = 5e-51
 Identities = 104/150 (69%), Positives = 121/150 (80%)
 Frame = -2

Query: 1054 DAAKRLKGKPLDIFVVNSFGSGFQALFVLLFMPFLSNMKGIPFAELPSYLRSGAACFLNI 875
            D AKRLKGK  DIFVVNSFGSGFQALFV L +PFLSN+KGIP AELP+Y+  GAACFLNI
Sbjct: 265  DGAKRLKGKRPDIFVVNSFGSGFQALFVFLLLPFLSNLKGIPLAELPAYINRGAACFLNI 324

Query: 874  GGNVTGCEGAPLLPLLFIFSNMAFNIALLNLVKISSAVIASLAATLAVPIAIYVLALPLP 695
            GGN+  C GAPLLPLLFI  NMAFNI++LNLVK+S+A++ASL ATLAVP++IYVL+LPLP
Sbjct: 325  GGNLKDCHGAPLLPLLFIAMNMAFNISVLNLVKMSTALVASLTATLAVPLSIYVLSLPLP 384

Query: 694  YXXXXXXXXXXXXXXSVILVLGLILYNLPQ 605
            Y              + ILVLGL+LYNLP+
Sbjct: 385  YIPGGTNLSTSFLVGAAILVLGLLLYNLPK 414


>ref|XP_003561943.1| PREDICTED: crt homolog 1-like [Brachypodium distachyon]
          Length = 424

 Score =  206 bits (525), Expect = 6e-51
 Identities = 104/152 (68%), Positives = 122/152 (80%)
 Frame = -2

Query: 1054 DAAKRLKGKPLDIFVVNSFGSGFQALFVLLFMPFLSNMKGIPFAELPSYLRSGAACFLNI 875
            D AKRL+GK  DIFVVNSFGSGFQALFV L +PFLSN+KGIP AELP+Y+  GAACFLNI
Sbjct: 266  DGAKRLEGKRPDIFVVNSFGSGFQALFVFLLLPFLSNLKGIPLAELPAYVNHGAACFLNI 325

Query: 874  GGNVTGCEGAPLLPLLFIFSNMAFNIALLNLVKISSAVIASLAATLAVPIAIYVLALPLP 695
            GGN+  C GAPLLPLLFI  NMAFNI++LNLVK+S+A++ASL ATLAVP++IYVL+LPLP
Sbjct: 326  GGNLNDCHGAPLLPLLFITLNMAFNISVLNLVKMSTALVASLTATLAVPLSIYVLSLPLP 385

Query: 694  YXXXXXXXXXXXXXXSVILVLGLILYNLPQFS 599
            Y              + +LVLGL+LYNLPQ S
Sbjct: 386  YMPGGTSLSTSFLVGAAVLVLGLLLYNLPQNS 417


>ref|XP_002527366.1| conserved hypothetical protein [Ricinus communis]
            gi|223533285|gb|EEF35038.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 429

 Score =  206 bits (525), Expect = 6e-51
 Identities = 104/154 (67%), Positives = 126/154 (81%)
 Frame = -2

Query: 1054 DAAKRLKGKPLDIFVVNSFGSGFQALFVLLFMPFLSNMKGIPFAELPSYLRSGAACFLNI 875
            DAAK LKGK LDIFVVNSFGSGFQALFV+L +P LSN+KGIPFA+LPSYL+SGA C +NI
Sbjct: 273  DAAKLLKGKSLDIFVVNSFGSGFQALFVVLLLPLLSNLKGIPFAQLPSYLKSGAGCLVNI 332

Query: 874  GGNVTGCEGAPLLPLLFIFSNMAFNIALLNLVKISSAVIASLAATLAVPIAIYVLALPLP 695
            G NV GC+GAP+LPLL+I  NMAFNI++LNLVK+SSAV++SLA TL+VPI+IYVL+LPLP
Sbjct: 333  GRNVPGCDGAPMLPLLYIMINMAFNISVLNLVKLSSAVVSSLAVTLSVPISIYVLSLPLP 392

Query: 694  YXXXXXXXXXXXXXXSVILVLGLILYNLPQFSRQ 593
            Y              S+ILVLGL+LYN+ +  +Q
Sbjct: 393  YLPEGSGLSPFFLLGSMILVLGLVLYNVARPGKQ 426


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