BLASTX nr result

ID: Coptis25_contig00010466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010466
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244...   241   8e-62
emb|CAN82730.1| hypothetical protein VITISV_035708 [Vitis vinifera]   241   8e-62
ref|XP_002327378.1| predicted protein [Populus trichocarpa] gi|2...   240   2e-61
ref|NP_567349.1| thioredoxin family protein [Arabidopsis thalian...   238   9e-61
gb|AAM65535.1| unknown [Arabidopsis thaliana]                         238   9e-61

>ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244724 [Vitis vinifera]
           gi|297741048|emb|CBI31360.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  241 bits (616), Expect = 8e-62
 Identities = 114/148 (77%), Positives = 130/148 (87%)
 Frame = +2

Query: 2   YPFLVDPGSGVSMYESGDIVKYLFEQYGGSRSPSVGLLESTLFTGWMPTVLRAGRGMTFW 181
           +PFL+DP +G+SMYESG+IVKYLF+QYG  +SPS GLLESTLFTGWMPT+LRAGRGMT W
Sbjct: 202 FPFLIDPNTGISMYESGEIVKYLFQQYGKGKSPSTGLLESTLFTGWMPTILRAGRGMTLW 261

Query: 182 EKARKDSPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIE 361
           EKAR D P K LELFSYENN YARIVREALCELE+PYIL NVG+GS R KLL++ SGS E
Sbjct: 262 EKARLDPPAKKLELFSYENNLYARIVREALCELELPYILQNVGEGSPRTKLLIEASGSKE 321

Query: 362 VPYLIDPNTDSQIGNYEKILSYLFMTYA 445
           VP++IDPNT  QIG+Y+KILSYLF TYA
Sbjct: 322 VPFIIDPNTGMQIGDYKKILSYLFQTYA 349



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 182 EKARKDSPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIE 361
           E+A    PP  L+LF +E  P+ R VREA+ EL++   ++   KGS+R++ +++  G  E
Sbjct: 141 EEATTVDPPTRLQLFEFEACPFCRRVREAITELDLSVEVYPCPKGSVRHREMVRRFGGKE 200

Query: 362 -VPYLIDPNTDSQIGNYEKILSYLFMTY 442
             P+LIDPNT   +    +I+ YLF  Y
Sbjct: 201 QFPFLIDPNTGISMYESGEIVKYLFQQY 228


>emb|CAN82730.1| hypothetical protein VITISV_035708 [Vitis vinifera]
          Length = 381

 Score =  241 bits (616), Expect = 8e-62
 Identities = 114/148 (77%), Positives = 130/148 (87%)
 Frame = +2

Query: 2   YPFLVDPGSGVSMYESGDIVKYLFEQYGGSRSPSVGLLESTLFTGWMPTVLRAGRGMTFW 181
           +PFL+DP +G+SMYESG+IVKYLF+QYG  +SPS GLLESTLFTGWMPT+LRAGRGMT W
Sbjct: 230 FPFLIDPNTGISMYESGEIVKYLFQQYGKGKSPSTGLLESTLFTGWMPTILRAGRGMTLW 289

Query: 182 EKARKDSPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIE 361
           EKAR D P K LELFSYENN YARIVREALCELE+PYIL NVG+GS R KLL++ SGS E
Sbjct: 290 EKARLDPPAKKLELFSYENNLYARIVREALCELELPYILQNVGEGSPRTKLLIEASGSKE 349

Query: 362 VPYLIDPNTDSQIGNYEKILSYLFMTYA 445
           VP++IDPNT  QIG+Y+KILSYLF TYA
Sbjct: 350 VPFIIDPNTGMQIGDYKKILSYLFQTYA 377


>ref|XP_002327378.1| predicted protein [Populus trichocarpa] gi|222835748|gb|EEE74183.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  240 bits (613), Expect = 2e-61
 Identities = 115/151 (76%), Positives = 130/151 (86%)
 Frame = +2

Query: 2   YPFLVDPGSGVSMYESGDIVKYLFEQYGGSRSPSVGLLESTLFTGWMPTVLRAGRGMTFW 181
           +PFLVDP +GVS+YESGDIVKYLF+QYG  RSPS+GLLESTLFTGWMPT+LRAGRGMT W
Sbjct: 179 FPFLVDPNTGVSIYESGDIVKYLFQQYGKGRSPSMGLLESTLFTGWMPTILRAGRGMTLW 238

Query: 182 EKARKDSPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIE 361
           EKAR D P K LELFS+ENNPYAR+VREALCELE+PYIL NVG GS R KLL   SG  E
Sbjct: 239 EKARLDPPSKKLELFSFENNPYARLVREALCELELPYILQNVGTGSQRTKLLGDASGFQE 298

Query: 362 VPYLIDPNTDSQIGNYEKILSYLFMTYATTA 454
           VPYLIDPNT ++IG+Y+KIL+YLF TY+  A
Sbjct: 299 VPYLIDPNTGAEIGDYKKILAYLFQTYSAAA 329



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +2

Query: 203 PPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYK-LLLQTSGSIEVPYLID 379
           PPK L+L+ +E  P+ R VREA+ EL++   ++   KGS+R++ ++ +  G  + P+L+D
Sbjct: 125 PPKPLQLYEFEACPFCRRVREAMTELDLSTEVYPCPKGSVRHREIVRKIGGKEQFPFLVD 184

Query: 380 PNTDSQIGNYEKILSYLFMTY 442
           PNT   I     I+ YLF  Y
Sbjct: 185 PNTGVSIYESGDIVKYLFQQY 205


>ref|NP_567349.1| thioredoxin family protein [Arabidopsis thaliana]
           gi|30681283|ref|NP_849353.1| thioredoxin family protein
           [Arabidopsis thaliana] gi|332657427|gb|AEE82827.1|
           thioredoxin family protein [Arabidopsis thaliana]
           gi|332657428|gb|AEE82828.1| thioredoxin family protein
           [Arabidopsis thaliana]
          Length = 333

 Score =  238 bits (607), Expect = 9e-61
 Identities = 109/151 (72%), Positives = 129/151 (85%)
 Frame = +2

Query: 2   YPFLVDPGSGVSMYESGDIVKYLFEQYGGSRSPSVGLLESTLFTGWMPTVLRAGRGMTFW 181
           +PFLVDP +   MYESGDIVKYLF+QYG  R PS GLLESTLFTGWMPT+LRAGRGM+ W
Sbjct: 181 FPFLVDPNTETLMYESGDIVKYLFKQYGNGRGPSTGLLESTLFTGWMPTLLRAGRGMSLW 240

Query: 182 EKARKDSPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIE 361
           +KA  D PPKMLELFSYENNPY+R+VREALCELE+PY+LHN+G+GS R K LL  SGS +
Sbjct: 241 DKASTDLPPKMLELFSYENNPYSRLVREALCELELPYVLHNIGEGSTRMKSLLNASGSNK 300

Query: 362 VPYLIDPNTDSQIGNYEKILSYLFMTYATTA 454
           VP+L+DPNT  Q+G+YEKIL+YLF TY++ A
Sbjct: 301 VPFLVDPNTGVQLGDYEKILAYLFKTYSSAA 331



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +2

Query: 200 SPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIEV-PYLI 376
           +PP  L+LF +E  P+ R VREA+ EL++   ++   KGSIR++ L++ SG  E+ P+L+
Sbjct: 126 NPPLRLQLFEFEACPFCRRVREAMTELDLSVEVYPCPKGSIRHRELVRRSGGKEMFPFLV 185

Query: 377 DPNTDSQIGNYEKILSYLFMTY 442
           DPNT++ +     I+ YLF  Y
Sbjct: 186 DPNTETLMYESGDIVKYLFKQY 207


>gb|AAM65535.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score =  238 bits (607), Expect = 9e-61
 Identities = 109/151 (72%), Positives = 129/151 (85%)
 Frame = +2

Query: 2   YPFLVDPGSGVSMYESGDIVKYLFEQYGGSRSPSVGLLESTLFTGWMPTVLRAGRGMTFW 181
           +PFLVDP +   MYESGDIVKYLF+QYG  R PS GLLESTLFTGWMPT+LRAGRGM+ W
Sbjct: 181 FPFLVDPNTETLMYESGDIVKYLFKQYGNGRGPSTGLLESTLFTGWMPTLLRAGRGMSLW 240

Query: 182 EKARKDSPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIE 361
           +KA  D PPKMLELFSYENNPY+R+VREALCELE+PY+LHN+G+GS R K LL  SGS +
Sbjct: 241 DKASTDLPPKMLELFSYENNPYSRLVREALCELELPYVLHNIGEGSTRMKSLLNASGSNK 300

Query: 362 VPYLIDPNTDSQIGNYEKILSYLFMTYATTA 454
           VP+L+DPNT  Q+G+YEKIL+YLF TY++ A
Sbjct: 301 VPFLVDPNTGVQLGDYEKILAYLFKTYSSAA 331



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +2

Query: 200 SPPKMLELFSYENNPYARIVREALCELEIPYILHNVGKGSIRYKLLLQTSGSIEV-PYLI 376
           +PP  L+LF +E  P+ R VREA+ EL++   ++   KGSIR++ L++ SG  E+ P+L+
Sbjct: 126 NPPLRLQLFEFEACPFCRRVREAMTELDLSVEVYPCPKGSIRHRELVRRSGGKEMFPFLV 185

Query: 377 DPNTDSQIGNYEKILSYLFMTY 442
           DPNT++ +     I+ YLF  Y
Sbjct: 186 DPNTETLMYESGDIVKYLFKQY 207


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