BLASTX nr result

ID: Coptis25_contig00010463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010463
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275625.1| PREDICTED: mitochondrial translocator assemb...   268   1e-69
ref|XP_002528146.1| conserved hypothetical protein [Ricinus comm...   265   2e-68
ref|XP_002299388.1| predicted protein [Populus trichocarpa] gi|2...   260   3e-67
ref|XP_004134527.1| PREDICTED: mitochondrial translocator assemb...   256   6e-66
ref|NP_190347.2| uncharacterized protein [Arabidopsis thaliana] ...   256   7e-66

>ref|XP_002275625.1| PREDICTED: mitochondrial translocator assembly and maintenance
           protein 41 homolog [Vitis vinifera]
           gi|297738029|emb|CBI27230.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  268 bits (686), Expect = 1e-69
 Identities = 138/224 (61%), Positives = 162/224 (72%)
 Frame = +1

Query: 1   HDLIQDIFSWEHFYLSGRLQKPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAEL 180
           HDL++D+ +WE FYLSGRLQKPV VL DNLDI N+N               P KFTE  L
Sbjct: 109 HDLVEDVLNWETFYLSGRLQKPVQVLVDNLDIGNLNSVNLKGAISAALLLLPAKFTEEHL 168

Query: 181 YAKICSLSYMGDLRMLFAEDKNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRH 360
           YAKICSLSYMGDLRMLFAED+NKV KIV+ QF LF+ MYKP +EEY AK LLR+ +   H
Sbjct: 169 YAKICSLSYMGDLRMLFAEDRNKVKKIVQVQFDLFQTMYKPLLEEYGAKGLLRFSSSDGH 228

Query: 361 FGNIVQDCGLPATSVLVSSLPSNVKRRMGMKSGEKINHSQSGRAIYEVTIASREEAASCM 540
              I QDCGL     LVSSLPS V+ +MGMK GEK   S+SGR + EV + SREEAA CM
Sbjct: 229 QAIISQDCGLSVARSLVSSLPSKVRSQMGMKLGEKTKLSESGRVLREVVVGSREEAAECM 288

Query: 541 QKVLRRIVLVSSTRQAISGVLAAGGVHAAKYLSNKMSKWWKS*T 672
           + VLRR V+VSS RQA+SG++A GGV+A +YL+NKM K WKS T
Sbjct: 289 RGVLRRKVMVSSARQAVSGLVAVGGVNAIRYLANKMEKAWKSWT 332


>ref|XP_002528146.1| conserved hypothetical protein [Ricinus communis]
           gi|223532444|gb|EEF34237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score =  265 bits (676), Expect = 2e-68
 Identities = 134/222 (60%), Positives = 165/222 (74%)
 Frame = +1

Query: 1   HDLIQDIFSWEHFYLSGRLQKPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAEL 180
           HDL+QDI +WE FYLSGRLQKPV++L DNLDI N+N               P KFTE +L
Sbjct: 109 HDLVQDILNWERFYLSGRLQKPVHILVDNLDIGNVNSANLRAALSAALLLLPSKFTEEDL 168

Query: 181 YAKICSLSYMGDLRMLFAEDKNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRH 360
           Y+KICSLSYMGDLRMLFAEDKNKV KIV+GQF LF  MY+P +++Y AK+LLR+ +   +
Sbjct: 169 YSKICSLSYMGDLRMLFAEDKNKVKKIVQGQFGLFHSMYRPILQDYEAKELLRFSS-SDY 227

Query: 361 FGNIVQDCGLPATSVLVSSLPSNVKRRMGMKSGEKINHSQSGRAIYEVTIASREEAASCM 540
             NI QDCGL  T  LV +LP  V+ +MGMK GE+   S SGR ++EV I SREEAA CM
Sbjct: 228 QSNISQDCGLSVTRSLVRALPPLVRSKMGMKLGEEKLWSDSGRFLHEVIIGSREEAAKCM 287

Query: 541 QKVLRRIVLVSSTRQAISGVLAAGGVHAAKYLSNKMSKWWKS 666
            KVLRR V++SS RQAISG+LAAGG++A +YL++K+ K WKS
Sbjct: 288 HKVLRRTVMISSARQAISGLLAAGGINATRYLASKVCKAWKS 329


>ref|XP_002299388.1| predicted protein [Populus trichocarpa] gi|222846646|gb|EEE84193.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  260 bits (665), Expect = 3e-67
 Identities = 131/222 (59%), Positives = 159/222 (71%)
 Frame = +1

Query: 1   HDLIQDIFSWEHFYLSGRLQKPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAEL 180
           HDL+QD+  WE FYL GRLQKPV++L DNLDI ++N               P KFTE +L
Sbjct: 73  HDLVQDVLHWERFYLCGRLQKPVHILVDNLDIGDVNSVNLRAAVSAALLLLPSKFTEEDL 132

Query: 181 YAKICSLSYMGDLRMLFAEDKNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRH 360
           Y+KICSLSYMGDLRMLFAEDKNKV +IVEGQF LF+ MYKPF++EY AK+LL +     H
Sbjct: 133 YSKICSLSYMGDLRMLFAEDKNKVKRIVEGQFGLFQSMYKPFLKEYEAKELLTFSLPNSH 192

Query: 361 FGNIVQDCGLPATSVLVSSLPSNVKRRMGMKSGEKINHSQSGRAIYEVTIASREEAASCM 540
              I QDC L  T  LV SLP  V+R+MGMK GE      SGR ++EV I SREEAA  M
Sbjct: 193 QATISQDCSLSMTHSLVHSLPPLVRRKMGMKLGEMQVLKDSGRVLHEVVIGSREEAARSM 252

Query: 541 QKVLRRIVLVSSTRQAISGVLAAGGVHAAKYLSNKMSKWWKS 666
           Q+++RR V+VSS RQA+SG LAAGG++A +YL+NK+ K WKS
Sbjct: 253 QRIIRRTVMVSSARQAVSGFLAAGGINATRYLANKVRKAWKS 294


>ref|XP_004134527.1| PREDICTED: mitochondrial translocator assembly and maintenance
           protein 41 homolog [Cucumis sativus]
          Length = 334

 Score =  256 bits (654), Expect = 6e-66
 Identities = 133/224 (59%), Positives = 161/224 (71%), Gaps = 2/224 (0%)
 Frame = +1

Query: 1   HDLIQDIFSWEHFYLSGRLQKPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAEL 180
           HDLIQDI  W+ FYLSGRLQKPVN+L D+LD++ +N               PPKFTE +L
Sbjct: 109 HDLIQDIQYWKTFYLSGRLQKPVNILVDSLDVQQLNSVNLRSAVSAALLLLPPKFTEVDL 168

Query: 181 YAKICSLSYMGDLRMLFAEDKNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRH 360
           YAKICSLSYMGDLRMLFAED++KVNKIV GQFPLF+ MY+P +E+Y  K+LL++      
Sbjct: 169 YAKICSLSYMGDLRMLFAEDRDKVNKIVRGQFPLFQSMYRPCLEQYKTKELLQFSPRGDD 228

Query: 361 FGNIVQDCGLPATSVLVSSLPSNVKRRMGMKSGEKINHSQSGRAI--YEVTIASREEAAS 534
             NI QDCGL AT  LVSSLP+ V   +G++ GEK + S  GR     +V I SR+E A 
Sbjct: 229 QANISQDCGLSATEYLVSSLPTTVWNTLGLRLGEKRSLSGPGRVTGRNQVLIQSRKEVAD 288

Query: 535 CMQKVLRRIVLVSSTRQAISGVLAAGGVHAAKYLSNKMSKWWKS 666
           CMQ+VLRR V+VSS RQA+SGVLA GGV AAKYL +KM K W+S
Sbjct: 289 CMQRVLRRKVMVSSARQAVSGVLAVGGVKAAKYLGSKMCKAWRS 332


>ref|NP_190347.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332644788|gb|AEE78309.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 320

 Score =  256 bits (653), Expect = 7e-66
 Identities = 132/222 (59%), Positives = 160/222 (72%)
 Frame = +1

Query: 1   HDLIQDIFSWEHFYLSGRLQKPVNVLKDNLDIENINXXXXXXXXXXXXXXXPPKFTEAEL 180
           HDL+QDI  W+ FYLSGRLQKPV++L DNLDIE++N               P KFTE +L
Sbjct: 97  HDLVQDILDWKRFYLSGRLQKPVHMLVDNLDIEDVNSVNKRAAISAALLLLPSKFTEEDL 156

Query: 181 YAKICSLSYMGDLRMLFAEDKNKVNKIVEGQFPLFRKMYKPFIEEYAAKDLLRYPAYVRH 360
           YAKICSLSYMGDLRM FAED NKVNKIV+GQF LF+ MYKPF+EE   K+LLR+ +    
Sbjct: 157 YAKICSLSYMGDLRMFFAEDTNKVNKIVKGQFDLFQSMYKPFLEECETKNLLRFSSAEAS 216

Query: 361 FGNIVQDCGLPATSVLVSSLPSNVKRRMGMKSGEKINHSQSGRAIYEVTIASREEAASCM 540
              +VQD  L AT  LVSSLP++V+ +MG   GEK   S++GR + EV I+SREEAA CM
Sbjct: 217 HTKLVQDSSLSATRSLVSSLPASVRSQMGKSLGEKKFVSETGRVMGEVCISSREEAAKCM 276

Query: 541 QKVLRRIVLVSSTRQAISGVLAAGGVHAAKYLSNKMSKWWKS 666
           +KV+RR V+VSS RQA+SG LAAG ++A  YLS KM K W S
Sbjct: 277 EKVMRRRVMVSSGRQAVSGFLAAGAINATMYLSQKMRKAWNS 318


Top