BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010446
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...    91   3e-16
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]    86   1e-14
emb|CBI28171.3| unnamed protein product [Vitis vinifera]               82   2e-13
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...    59   1e-06
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...    59   2e-06

>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 63/157 (40%), Positives = 78/157 (49%)
 Frame = -3

Query: 867 SHLKEAGQERPGRQHKRQTVHGRLTSEVASNRIGACNESDHRSYGSHHRGLSRQTESRYS 688
           SHL   GQ RPG     Q  HG+L  EV S  I    ++  + YG +  G  R + S  S
Sbjct: 381 SHLLGHGQGRPG---SNQRPHGKLVLEVKSTAIEPHRKNGSQLYGGNDHGWLRHSRSNRS 437

Query: 687 KTXXXXXXXXXXXXXXXRFSENSRGGTASQNARSPKESITTFTGPKTLAEIKEEKRKTSE 508
           +                  S       AS+  +S + S T FTGPKTLA+IKEEK+K  E
Sbjct: 438 RQRDKERRLARKQS----LSSEVLRKPASKERKSSQAS-TQFTGPKTLAQIKEEKKKAEE 492

Query: 507 IRVSNGSTTNNGRTASQNFEGPKPLREILKDKRRLGS 397
                G T N+ R A+ +FE PKPL EILKDKRR  S
Sbjct: 493 NGDYTGKTDNSSRMATADFESPKPLSEILKDKRRPSS 529


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 67/193 (34%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
 Frame = -3

Query: 960 EVDLSVRNGVDLRNQLXXXXXXXXXXXRG-----SLSHLKEAGQERPGRQHKRQTVHGRL 796
           E+ ++ R+G+DLR++L                    S L    +ER  R    Q + GR 
Sbjct: 358 ELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRS 417

Query: 795 TSEVASNRIGACNESDHRSYGSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSR 616
            SEV  N IG  +E++  S   + +G  R++    S+                  SE+SR
Sbjct: 418 ASEVRKNIIGMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHIS---SEDSR 474

Query: 615 GGTASQNARSPKESITTFTGPKTLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKP 436
              + +  R      TTFTGPK+LA+IKEEKRK  E     G    +  T S +F+GPKP
Sbjct: 475 KPVSRE--RISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKP 532

Query: 435 LREILKDKRRLGS 397
           L EILKDKR+LGS
Sbjct: 533 LSEILKDKRKLGS 545


>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
 Frame = -3

Query: 960 EVDLSVRNGVDLRNQLXXXXXXXXXXXRG-----SLSHLKEAGQERPGRQHKRQTVHGRL 796
           E+ ++ R+G+DLR++L                    S L    +ER  R    Q + GR 
Sbjct: 322 ELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRS 381

Query: 795 TSEVASNRIGACNESDHRSYGSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSR 616
            SEV  N IG  +E++  S   + +G  R++    S+                  SE+SR
Sbjct: 382 ASEVRKNIIGMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHIS---SEDSR 438

Query: 615 GGTASQNARSPKESITTFTGPKTLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKP 436
              + +  R      TTFTGPK+LA+IKEEKRK  E     G    +  T S +F+GPKP
Sbjct: 439 KPVSRE--RISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKP 496

Query: 435 LREILKDKRRL 403
           L EILKDKR+L
Sbjct: 497 LSEILKDKRKL 507


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 526

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 50/154 (32%), Positives = 74/154 (48%)
 Frame = -3

Query: 864 HLKEAGQERPGRQHKRQTVHGRLTSEVASNRIGACNESDHRSYGSHHRGLSRQTESRYSK 685
           HL+   ++RP R         RLTS++  + I +  E +  S G+  R L RQ++++  +
Sbjct: 391 HLRHGIEQRPSR---------RLTSQLGYSAIDSTGEVETLSIGNKRR-LFRQSQAQQHR 440

Query: 684 TXXXXXXXXXXXXXXXRFSENSRGGTASQNARSPKESITTFTGPKTLAEIKEEKRKTSEI 505
                             S+ SR     Q     + S  TF+GPKTLAEIKEEK K    
Sbjct: 441 PRKNYIEKLPKRQFVS--SKISRKPVFKQRGLIHESS--TFSGPKTLAEIKEEKMK---- 492

Query: 504 RVSNGSTTNNGRTASQNFEGPKPLREILKDKRRL 403
              N   + + ++ S +F+ PKPL EILK KR +
Sbjct: 493 --KNAEGSLHWKSTSTDFQDPKPLSEILKVKRTM 524


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 524

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 52/148 (35%), Positives = 71/148 (47%)
 Frame = -3

Query: 846 QERPGRQHKRQTVHGRLTSEVASNRIGACNESDHRSYGSHHRGLSRQTESRYSKTXXXXX 667
           QER  R    Q    RLTS++  + I +  E    S  + HR L R ++++  K      
Sbjct: 387 QERHQRHGIEQRPIRRLTSQLGYSAIDSIGEVGTLSVANKHR-LFRHSQAQQHKPRKHYR 445

Query: 666 XXXXXXXXXXRFSENSRGGTASQNARSPKESITTFTGPKTLAEIKEEKRKTSEIRVSNGS 487
                       S+ SR     Q  R      + F+GPKTLAEIKEEK K +E     GS
Sbjct: 446 EKLPKRQFLS--SKISRKPAFKQ--RGFIHEFSAFSGPKTLAEIKEEKMKKAE-----GS 496

Query: 486 TTNNGRTASQNFEGPKPLREILKDKRRL 403
              + ++ S +F+ PKPL EILKDKR +
Sbjct: 497 L--HWKSTSTDFQDPKPLSEILKDKRTM 522