BLASTX nr result

ID: Coptis25_contig00010444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010444
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 h...   115   5e-24
ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 h...   108   7e-22
gb|AFK43861.1| unknown [Lotus japonicus]                              105   5e-21
ref|XP_002276138.1| PREDICTED: cell division cycle protein 123 h...   105   5e-21

>ref|XP_002274599.1| PREDICTED: cell division cycle protein 123 homolog [Vitis vinifera]
          Length = 338

 Score =  115 bits (288), Expect = 5e-24
 Identities = 54/71 (76%), Positives = 61/71 (85%), Gaps = 3/71 (4%)
 Frame = -2

Query: 549 FTLPLLFSWEELQDSFGEEE---LVQFRVVESQCAVRPSLKTAVPYDYLDTSPGSGWDQF 379
           FTLPLLF+WEEL+   GEEE   +V+FR+VES CAVRP LKTAVPYDYLD SPGSGWDQF
Sbjct: 260 FTLPLLFTWEELEQKCGEEEDEDVVEFRIVESHCAVRPGLKTAVPYDYLDVSPGSGWDQF 319

Query: 378 LRRADEELQKQ 346
           LR AD+ELQ+Q
Sbjct: 320 LRNADQELQRQ 330


>ref|XP_002310498.1| predicted protein [Populus trichocarpa] gi|222853401|gb|EEE90948.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/74 (68%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = -2

Query: 549 FTLPLLFSWEELQDSFGE-EELVQFRVVESQCAVRPSLKTAVPYDYLDTSPGSGWDQFLR 373
           FTLPLLF+WEEL+ +  E E +V FR+VESQC +RP LKTAVP DYLDT PGSGWDQFLR
Sbjct: 260 FTLPLLFTWEELEQNLEEVENVVDFRIVESQCGIRPGLKTAVPQDYLDTGPGSGWDQFLR 319

Query: 372 RADEELQKQDTHEG 331
           +AD+ELQ+Q    G
Sbjct: 320 KADKELQQQKMAPG 333


>ref|XP_003544043.1| PREDICTED: cell division cycle protein 123 homolog [Glycine max]
          Length = 332

 Score =  108 bits (269), Expect = 7e-22
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = -2

Query: 549 FTLPLLFSWEELQDSFGEEELVQFRVVESQCAVRPSLKTAVPYDYLDTSPGSGWDQFLRR 370
           FTL LLF+W+EL     E   V+FR+VE +CAVRP LKTAVP+DYLDTSPGSGWDQFLR 
Sbjct: 259 FTLSLLFTWDELDHIHSEGNDVEFRIVEDRCAVRPGLKTAVPFDYLDTSPGSGWDQFLRN 318

Query: 369 ADEELQKQDTHEG 331
           ADEEL++Q T  G
Sbjct: 319 ADEELRRQSTGAG 331


>gb|AFK43861.1| unknown [Lotus japonicus]
          Length = 335

 Score =  105 bits (262), Expect = 5e-21
 Identities = 49/70 (70%), Positives = 58/70 (82%)
 Frame = -2

Query: 555 APFTLPLLFSWEELQDSFGEEELVQFRVVESQCAVRPSLKTAVPYDYLDTSPGSGWDQFL 376
           A FTL LLF+W+EL+   GE + V+FR+VE +C VRP LKTAVPYDYLDTS GSGWDQFL
Sbjct: 258 ASFTLSLLFTWDELEVINGEGDDVEFRIVEDRCGVRPGLKTAVPYDYLDTSAGSGWDQFL 317

Query: 375 RRADEELQKQ 346
           R ADEEL++Q
Sbjct: 318 RNADEELRRQ 327


>ref|XP_002276138.1| PREDICTED: cell division cycle protein 123 homolog [Vitis vinifera]
          Length = 385

 Score =  105 bits (262), Expect = 5e-21
 Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 549 FTLPLLFSWEELQDSFGEE-ELVQFRVVESQCAVRPSLKTAVPYDYLDTSPGSGWDQFLR 373
           FTLPLLF+WEEL+ +  EE   V+FR+VESQ AVRP LKTAVPYDYL T PGSGWDQFLR
Sbjct: 260 FTLPLLFTWEELEQNCAEEGHGVEFRIVESQSAVRPGLKTAVPYDYLATGPGSGWDQFLR 319

Query: 372 RADEELQKQDTHEGKEFQR 316
            AD+EL++Q   +    Q+
Sbjct: 320 NADQELERQTRRDRPGLQK 338


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