BLASTX nr result

ID: Coptis25_contig00010432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010432
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|2...   358   2e-96
ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96
ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244...   355   2e-95
ref|XP_002513537.1| thump domain protein, putative [Ricinus comm...   355   2e-95
gb|EEC68380.1| hypothetical protein OsI_36525 [Oryza sativa Indi...   352   1e-94

>ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|222845557|gb|EEE83104.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  358 bits (919), Expect = 2e-96
 Identities = 197/359 (54%), Positives = 246/359 (68%), Gaps = 16/359 (4%)
 Frame = +3

Query: 96   RYLPYSKSVKK-GSYPLRPGVQGFFITCDGGRERQASNEAINVLDTFYEQLVDGEASSIK 272
            RYLP++K VKK GSYPL PGVQGFFITCDGGRERQAS EAINV+D+FYE+LV G+ +S+K
Sbjct: 23   RYLPHNKPVKKKGSYPLHPGVQGFFITCDGGRERQASREAINVIDSFYEELVFGKDTSVK 82

Query: 273  HAVQPSKPLNKKITFXXXXXXXXXXXXAQIKEEDANQEKETS--EAGDTPSKKQ------ 428
             A  P+KP+NKKI F             +  EED   E ++   EA D  ++        
Sbjct: 83   LAELPNKPINKKIKFSYSDVEGDDDEEKEEDEEDGLDENKSGAPEANDAKNENPADEKLG 142

Query: 429  --CLETIAP---KEEEANHED--QTSKKQCLEATEQKEEEANLEDQTSKLESVVNEEPVX 587
              CLE  +    + E+ N E+  +  KKQ  EA E   ++   E  T   +SV  E+   
Sbjct: 143  SPCLENESSECQRREKTNQEEGCKNDKKQESEAEELPAKKKCTE--TCAPKSVGQEKVEE 200

Query: 588  XXXXXXXXXXXXXXXXRSKRRFVTLDPGCNGVAFVQMLKRDGDPGPADIVKHMMMSAAAT 767
                            ++KR F++LD GCNGV FVQM K DGDP P DIV+HMM SAA+T
Sbjct: 201  KSIDKLIEDELKELGDKNKRHFLSLDSGCNGVVFVQMRKIDGDPCPKDIVQHMMTSAAST 260

Query: 768  RKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARANTGIE 947
            RKHMSRFILRVLP+E+ CYASE+EISRAI P++E+YFP + + P KFAV+Y+ARAN+GI+
Sbjct: 261  RKHMSRFILRVLPIEVACYASEDEISRAIAPVVEKYFPVDTQDPQKFAVMYEARANSGID 320

Query: 948  RMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQLTSPK 1124
            RM II +VAK VPGPHKVDL+NPDK+I+V+I KT+C IGV+EKYKELSKYNLRQLTS K
Sbjct: 321  RMKIINSVAKCVPGPHKVDLSNPDKTIVVEIVKTLCLIGVIEKYKELSKYNLRQLTSSK 379


>ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|222849769|gb|EEE87316.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  357 bits (917), Expect = 3e-96
 Identities = 190/355 (53%), Positives = 243/355 (68%), Gaps = 12/355 (3%)
 Frame = +3

Query: 99   YLPYSKSV-KKGSYPLRPGVQGFFITCDGGRERQASNEAINVLDTFYEQLVDGEASSIKH 275
            YLP++K V KKGSYPL PGVQGFFITCDGGRERQAS EAINV+D+FYE+L  G+ +S+K 
Sbjct: 24   YLPHNKPVRKKGSYPLHPGVQGFFITCDGGRERQASREAINVIDSFYEELAYGKDTSVKL 83

Query: 276  AVQPSKPLNKKITFXXXXXXXXXXXXAQIKEEDANQEKETSEAGDTPSKKQCLETI-APK 452
            A  P KP NKKI F               ++ +   + E  E  D  +     + + +P 
Sbjct: 84   ADFPDKPTNKKIKFSYSDDEGDGEEDDDEEDGEDENKSEAPEGNDAMNDNPTDKKVGSPT 143

Query: 453  EEEANHEDQTSKKQCLE-ATEQKEEEANLED---------QTSKLESVVNEEPVXXXXXX 602
             E  N E+QT +K   E   +  E++AN  +         +T   ++VV E+        
Sbjct: 144  VENENSENQTEEKTNQEEGCKNDEKQANEAEGPPAKKKCTETCAPKTVVQEKVEEKSIDR 203

Query: 603  XXXXXXXXXXXRSKRRFVTLDPGCNGVAFVQMLKRDGDPGPADIVKHMMMSAAATRKHMS 782
                       ++KRRF++LD GCNGVAF+QM K DGDP P DIV+H+M SAA+TRKHMS
Sbjct: 204  LIEDELKELGDKNKRRFLSLDSGCNGVAFIQMRKIDGDPCPKDIVQHIMTSAASTRKHMS 263

Query: 783  RFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARANTGIERMAII 962
            RFI+R+LP+E+ CYASEEEISRAI P++E+YFP + + PLKFAV+Y+ARAN+GI+RM II
Sbjct: 264  RFIIRMLPIEVACYASEEEISRAIAPVVEKYFPVDTQDPLKFAVMYEARANSGIDRMKII 323

Query: 963  KAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQLTSPKE 1127
             +VAK VPGPHKVDL NPDK+I+V+I KTVC IGV+EKYKELSKYNLRQLTS K+
Sbjct: 324  NSVAKSVPGPHKVDLGNPDKTIVVEIVKTVCLIGVIEKYKELSKYNLRQLTSSKQ 378


>ref|XP_002278600.1| PREDICTED: uncharacterized protein LOC100244787 [Vitis vinifera]
            gi|297734958|emb|CBI17192.3| unnamed protein product
            [Vitis vinifera]
          Length = 392

 Score =  355 bits (911), Expect = 2e-95
 Identities = 196/374 (52%), Positives = 243/374 (64%), Gaps = 31/374 (8%)
 Frame = +3

Query: 96   RYLPYSKSVKK-GSYPLRPGVQGFFITCDGGRERQASNEAINVLDTFYEQLVDGEASSIK 272
            RYLP++K VKK G YPL PGVQGFFITCDGGRERQAS EA+NV+D+F+E+LV G+ S +K
Sbjct: 22   RYLPHNKPVKKKGGYPLHPGVQGFFITCDGGRERQASREALNVIDSFFEELVHGKDSGVK 81

Query: 273  HAVQPSKPLNKKITFXXXXXXXXXXXXAQIKEEDANQEKETSEAGD-TPSKKQCLETIAP 449
             ++ P+KP+NKKI F                EED +      +A D  PS ++   +   
Sbjct: 82   LSMLPNKPMNKKIKFSYSDSGSDDDDDDIDDEEDKSDLHREKDANDENPSNEK---SHPQ 138

Query: 450  KEEEANHEDQTSKK---QCLEATEQKEEEA-------NLED------------------- 542
            K ++   E+Q  +K   +  +  E +E +A       N ED                   
Sbjct: 139  KNDDVCRENQNKEKADDKTQDGNENQENDADGEKADKNTEDGNENQEVDAEEPSAKKQCL 198

Query: 543  QTSKLESVVNEEPVXXXXXXXXXXXXXXXXXRSKRRFVTLDPGCNGVAFVQMLKRDGDPG 722
            +T     +++E+                   R+KRRF  LD GCNGV FVQM K+DGDP 
Sbjct: 199  ETDASTHIIHEKTEEKSIDKLIEAELQELGDRNKRRFGNLDSGCNGVVFVQMRKKDGDPS 258

Query: 723  PADIVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPL 902
            P +IV+HMM SAA+TRKHMSRFILRVLPVE TCYASEEEIS AIKPL+EQYFP E + P 
Sbjct: 259  PKEIVQHMMTSAASTRKHMSRFILRVLPVEATCYASEEEISIAIKPLVEQYFPVETQNPK 318

Query: 903  KFAVLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYK 1082
            KFAVLY+AR+NTGI+RM II +VAK VPGPHKVDL+NPD +I+VQI KTVC IG +EKYK
Sbjct: 319  KFAVLYEARSNTGIDRMKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGFLEKYK 378

Query: 1083 ELSKYNLRQLTSPK 1124
            EL+KYNLRQLTSPK
Sbjct: 379  ELAKYNLRQLTSPK 392


>ref|XP_002513537.1| thump domain protein, putative [Ricinus communis]
            gi|223547445|gb|EEF48940.1| thump domain protein,
            putative [Ricinus communis]
          Length = 382

 Score =  355 bits (911), Expect = 2e-95
 Identities = 196/364 (53%), Positives = 241/364 (66%), Gaps = 21/364 (5%)
 Frame = +3

Query: 96   RYLPYSKSVKK-GSYPLRPGVQGFFITCDGGRERQASNEAINVLDTFYEQLVDGEASSIK 272
            RYLP++K VKK GSYPL PGVQGFFITCDGGRERQAS+EAINV+D+FYE+LV  + +S+K
Sbjct: 20   RYLPHNKPVKKKGSYPLHPGVQGFFITCDGGRERQASHEAINVIDSFYEELVHAKDTSVK 79

Query: 273  HAVQPSKPLNKKITFXXXXXXXXXXXXAQIKEEDANQEKETSEAGDTPSKKQ-------- 428
              + P KP +KKI F                EE+   ++E  E G+    KQ        
Sbjct: 80   LEL-PKKPSSKKIKFVYSDDEEDDDDNGVEGEEEEEDKEEDKEEGNKSDTKQNNDDKNDN 138

Query: 429  -CLETIA-PKEEEANHEDQTSKKQC-LEATEQKEEEANLEDQ---------TSKLESVVN 572
               E +  P  ++  + +QT K  C  EA  + E + N  D+         T    SVV+
Sbjct: 139  PANEKLEFPNVDKTCNGNQTEKNTCDNEAGGKDEHQTNETDEPPAKKQIIETCVSSSVVH 198

Query: 573  EEPVXXXXXXXXXXXXXXXXXRSKRRFVTLDPGCNGVAFVQMLKRDGDPGPADIVKHMMM 752
            E+                   +SKRRF  LD GCNGV FVQM KRDGDP P DI +H+M 
Sbjct: 199  EKVEQRSIDKLIEDELKELGDKSKRRFTNLDSGCNGVVFVQMRKRDGDPSPKDIAQHIMT 258

Query: 753  SAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARA 932
            SAA+TRKHMSRFILRVLPVE+ CYASEEEIS+A+ P++E+YFP + + P KFAVLY+ARA
Sbjct: 259  SAASTRKHMSRFILRVLPVEIACYASEEEISKAMAPIVEKYFPVDTQNPQKFAVLYEARA 318

Query: 933  NTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQL 1112
            NTGI+RM II +VAK VPGPHKVDLNNPDK+I+V+I KTVC IG+VE YK L+KYNLRQL
Sbjct: 319  NTGIDRMKIINSVAKSVPGPHKVDLNNPDKTIVVEIVKTVCLIGLVENYKGLAKYNLRQL 378

Query: 1113 TSPK 1124
            TSPK
Sbjct: 379  TSPK 382


>gb|EEC68380.1| hypothetical protein OsI_36525 [Oryza sativa Indica Group]
          Length = 374

 Score =  352 bits (903), Expect = 1e-94
 Identities = 190/355 (53%), Positives = 242/355 (68%), Gaps = 11/355 (3%)
 Frame = +3

Query: 96   RYLPYSKSVKKGSYPLRPGVQGFFITCDGGRERQASNEAINVLDTFYEQLVDGEASSIKH 275
            +YLP+ K V+KG+YPLRPGVQGFF+TCDGGRERQA+ EA+++LD+FYE LVDG+ S  K 
Sbjct: 24   KYLPHGKPVRKGAYPLRPGVQGFFLTCDGGRERQATREALSLLDSFYEDLVDGKGSDGKP 83

Query: 276  AVQPSKPLNKKITFXXXXXXXXXXXXAQIKEEDANQEKETSEAGDTPSKKQCLET-IAPK 452
               P KPLNKKITF               +  D     +  E   +  +K+  +T + P 
Sbjct: 84   KSIPDKPLNKKITFVDSDSSDDEEEDHSGEVTDDTNNADKGETTPSEQQKEVSDTPVVPS 143

Query: 453  ---EEEANHEDQTS-KKQCL------EATEQKEEEANLEDQTSKLESVVNEEPVXXXXXX 602
               EE+ ++ D++  KKQ +      E TE KE      + T K +   N++P+      
Sbjct: 144  KDNEEQTDNADESKLKKQRVQDPPISEQTEPKEPTDKPTESTDKPKGS-NDKPIDDLIDE 202

Query: 603  XXXXXXXXXXXRSKRRFVTLDPGCNGVAFVQMLKRDGDPGPADIVKHMMMSAAATRKHMS 782
                       R KR F TLD GCNG  F+QM KRDGDPGP +IV++MM SAA+TRKHMS
Sbjct: 203  DLKELGD----RKKRLFATLDSGCNGCIFIQMHKRDGDPGPVEIVQNMMSSAASTRKHMS 258

Query: 783  RFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARANTGIERMAII 962
            RFILR LP E+TCYASEEEI++AI PL+E+YFP E+ +  KFAVLY+AR+NTGI+RM II
Sbjct: 259  RFILRFLPTEVTCYASEEEITKAISPLVEKYFPKESSSVYKFAVLYEARSNTGIDRMKII 318

Query: 963  KAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQLTSPKE 1127
             AVAK VP PHKVDL++PD++IIVQIAKT+C IGVVE+YKEL+K+NLRQLTSP E
Sbjct: 319  NAVAKSVPQPHKVDLSSPDRTIIVQIAKTICMIGVVERYKELAKFNLRQLTSPPE 373


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