BLASTX nr result

ID: Coptis25_contig00010424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010424
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280727.1| PREDICTED: protein CREG1 [Vitis vinifera] gi...   281   2e-73
gb|AFK35173.1| unknown [Lotus japonicus]                              272   9e-71
ref|XP_003622189.1| Protein CREG1 [Medicago truncatula] gi|35549...   268   1e-69
ref|XP_002517410.1| Protein CREG1 precursor, putative [Ricinus c...   268   2e-69
gb|ABK95925.1| unknown [Populus trichocarpa]                          266   5e-69

>ref|XP_002280727.1| PREDICTED: protein CREG1 [Vitis vinifera]
           gi|296087727|emb|CBI34983.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  281 bits (718), Expect = 2e-73
 Identities = 134/207 (64%), Positives = 166/207 (80%), Gaps = 1/207 (0%)
 Frame = +1

Query: 139 KVKMGMMRGVSAIFVMFL-FVIAVNGRGLGPSISKPDPADGVATARWLASQNTWGVLSTI 315
           K+K      + A+ ++F+ F ++V+GR L  S+SKPDP D  ATARWL SQN WGVL+TI
Sbjct: 2   KIKGDFRCHLFALVLIFVGFQVSVHGRLL--SVSKPDPDDAAATARWLVSQNNWGVLNTI 59

Query: 316 SIELKGAPFGNVVSFSDGLPDKGLGVPYFYMSTLDPTPRNALKDERASFAVSEVPIGSCG 495
           S +L GAPFGNVVSFSDGLPD+G G+PYFY++TLDPT RNAL D+R+S  +SE PIG+CG
Sbjct: 60  SSDLGGAPFGNVVSFSDGLPDEGHGIPYFYLTTLDPTARNALSDQRSSLTISEYPIGTCG 119

Query: 496 KADPENPTCSKLTLTGKLKLVSRNTKEAESAASALFSKHPEMKDWPKDHEFEIYRLDIED 675
           K DPENP+C+K+TLTGKLKLV   +KEA+ A +ALFSKHPEMK WPK H F+ + LDIED
Sbjct: 120 KKDPENPSCAKITLTGKLKLVDEKSKEADFARNALFSKHPEMKGWPKGHNFQFFTLDIED 179

Query: 676 IFLIDWFGGRKPITLAQYLHPRMDQLA 756
           IFLIDWFGG KP+T+ QYLHP+  +LA
Sbjct: 180 IFLIDWFGGPKPLTVDQYLHPKTYKLA 206


>gb|AFK35173.1| unknown [Lotus japonicus]
          Length = 239

 Score =  272 bits (696), Expect = 9e-71
 Identities = 121/171 (70%), Positives = 148/171 (86%)
 Frame = +1

Query: 232 ISKPDPADGVATARWLASQNTWGVLSTISIELKGAPFGNVVSFSDGLPDKGLGVPYFYMS 411
           ++KPDP +  ATARW+ S N+WGVL+TISI+L GAPFGNVVSFSDGLP +G G+PYFY++
Sbjct: 42  LTKPDPNNAAATARWVVSLNSWGVLNTISIDLGGAPFGNVVSFSDGLPKEGSGIPYFYLT 101

Query: 412 TLDPTPRNALKDERASFAVSEVPIGSCGKADPENPTCSKLTLTGKLKLVSRNTKEAESAA 591
            LDPT RNA KD+RASF VSE PIG+CG+ DPENPTCSK+TLTGKLKLV   +KEAE A 
Sbjct: 102 ALDPTARNAFKDQRASFTVSEYPIGTCGQIDPENPTCSKITLTGKLKLVDEKSKEAEFAK 161

Query: 592 SALFSKHPEMKDWPKDHEFEIYRLDIEDIFLIDWFGGRKPITLAQYLHPRM 744
           +ALF+KHPEMK WP+DH+F++++L+IEDIFLIDWFGG KP+T+ QYLHP M
Sbjct: 162 NALFAKHPEMKGWPQDHDFQVFKLEIEDIFLIDWFGGPKPLTVEQYLHPHM 212


>ref|XP_003622189.1| Protein CREG1 [Medicago truncatula] gi|355497204|gb|AES78407.1|
           Protein CREG1 [Medicago truncatula]
          Length = 208

 Score =  268 bits (686), Expect = 1e-69
 Identities = 122/181 (67%), Positives = 153/181 (84%)
 Frame = +1

Query: 205 VNGRGLGPSISKPDPADGVATARWLASQNTWGVLSTISIELKGAPFGNVVSFSDGLPDKG 384
           V GR L  S +KPDP D  ATARWL S N WGVL+TIS +L G PFGNVVSFSDGLPD+G
Sbjct: 23  VQGRLLSIS-TKPDPKDAAATARWLVSSNFWGVLNTISTDLGGTPFGNVVSFSDGLPDQG 81

Query: 385 LGVPYFYMSTLDPTPRNALKDERASFAVSEVPIGSCGKADPENPTCSKLTLTGKLKLVSR 564
            G+PYFY++TLDPT RNAL DERASF VSE P+G+CGK DPENPTCSK++LTGKLKLV +
Sbjct: 82  SGIPYFYLTTLDPTARNALVDERASFTVSEYPLGTCGKKDPENPTCSKISLTGKLKLVDK 141

Query: 565 NTKEAESAASALFSKHPEMKDWPKDHEFEIYRLDIEDIFLIDWFGGRKPITLAQYLHPRM 744
            +KEAE A +ALF+KH EM DWP++H+F++++L+IE+IFLIDW+GG KP+T+ +YLHP++
Sbjct: 142 KSKEAEFARNALFAKHSEMMDWPENHDFQVFKLEIENIFLIDWYGGPKPLTVEEYLHPKL 201

Query: 745 D 747
           +
Sbjct: 202 N 202


>ref|XP_002517410.1| Protein CREG1 precursor, putative [Ricinus communis]
           gi|223543421|gb|EEF44952.1| Protein CREG1 precursor,
           putative [Ricinus communis]
          Length = 201

 Score =  268 bits (684), Expect = 2e-69
 Identities = 128/203 (63%), Positives = 162/203 (79%), Gaps = 4/203 (1%)
 Frame = +1

Query: 148 MGMMRG-VSAIFVMFLFV---IAVNGRGLGPSISKPDPADGVATARWLASQNTWGVLSTI 315
           MG+ +  VS ++V+ +FV     V GR L   + KPD  +  ATARWL SQN+WGVL+TI
Sbjct: 1   MGIKKSIVSCLYVVLVFVGFQDFVEGRLL--LLKKPDRDNAAATARWLVSQNSWGVLNTI 58

Query: 316 SIELKGAPFGNVVSFSDGLPDKGLGVPYFYMSTLDPTPRNALKDERASFAVSEVPIGSCG 495
           S++L GAPFGNVVSFSDGLP++G G+PYFY++TLDPT RNALKD+R+S  +SE PIG+CG
Sbjct: 59  SMDLGGAPFGNVVSFSDGLPNEGSGIPYFYLTTLDPTARNALKDQRSSLTISEYPIGTCG 118

Query: 496 KADPENPTCSKLTLTGKLKLVSRNTKEAESAASALFSKHPEMKDWPKDHEFEIYRLDIED 675
           K DPENPTC+K+TLTGKLKL+  NTKEAE A +ALF++H EM  WPKDH F+ ++LDIED
Sbjct: 119 KTDPENPTCAKITLTGKLKLLEENTKEAEFARTALFTRHQEMPGWPKDHNFQFFKLDIED 178

Query: 676 IFLIDWFGGRKPITLAQYLHPRM 744
           IFLI+WFGG KP+TL +Y H +M
Sbjct: 179 IFLINWFGGPKPLTLDEYFHQKM 201


>gb|ABK95925.1| unknown [Populus trichocarpa]
          Length = 208

 Score =  266 bits (681), Expect = 5e-69
 Identities = 124/200 (62%), Positives = 158/200 (79%), Gaps = 4/200 (2%)
 Frame = +1

Query: 148 MGMMRGVSAIFVMFLFVI----AVNGRGLGPSISKPDPADGVATARWLASQNTWGVLSTI 315
           MG     +  + +F  ++    +V GR L   I+KPDP D  A+ARWL SQN+WGVL+TI
Sbjct: 1   MGTKSRTNCFYALFFLLVGFQDSVQGRLL--LINKPDPNDPAASARWLVSQNSWGVLNTI 58

Query: 316 SIELKGAPFGNVVSFSDGLPDKGLGVPYFYMSTLDPTPRNALKDERASFAVSEVPIGSCG 495
           S +L GAPFGNVVSFSDGLP KG G+PYFY++TLDPT +NAL+D+R+SF +SE P+G+CG
Sbjct: 59  SSDLGGAPFGNVVSFSDGLPGKGSGIPYFYLTTLDPTAKNALQDQRSSFTISEYPLGTCG 118

Query: 496 KADPENPTCSKLTLTGKLKLVSRNTKEAESAASALFSKHPEMKDWPKDHEFEIYRLDIED 675
           K DPENP+C+K+TLTGKLK++  N+KEAE A SALF KHPEM+ WPK H F+ ++LDIED
Sbjct: 119 KKDPENPSCAKITLTGKLKVLKENSKEAEIAKSALFVKHPEMRGWPKGHNFQFFKLDIED 178

Query: 676 IFLIDWFGGRKPITLAQYLH 735
           IFLI+WFGG KP+T+ QYLH
Sbjct: 179 IFLINWFGGPKPLTVDQYLH 198


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