BLASTX nr result

ID: Coptis25_contig00010423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010423
         (1410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510508.1| Auxin response factor, putative [Ricinus com...    84   1e-13
ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isof...    82   3e-13
emb|CBI19831.3| unnamed protein product [Vitis vinifera]               82   3e-13
ref|XP_002300718.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-13
gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prun...    81   8e-13

>ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
           gi|223551209|gb|EEF52695.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 950

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 5/61 (8%)
 Frame = +1

Query: 259 SNAKSPDLEEKVCFKQ-----GTRKSINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQM 423
           S A++  LEE    K+     GTRK+INSELW+ACAGPLVSLPQVGSLVYYFPQGHSEQ+
Sbjct: 16  SGAQTNLLEEMKLLKEIQDHSGTRKTINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQV 75

Query: 424 S 426
           +
Sbjct: 76  A 76


>ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +1

Query: 301 KQGTRKSINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQMS 426
           + G RK+INSELWHACAGPLVSLPQVGSLVYYFPQGHSEQ++
Sbjct: 34  QSGPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVA 75


>emb|CBI19831.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +1

Query: 301 KQGTRKSINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQMS 426
           + G RK+INSELWHACAGPLVSLPQVGSLVYYFPQGHSEQ++
Sbjct: 35  QSGPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVA 76


>ref|XP_002300718.1| predicted protein [Populus trichocarpa] gi|222842444|gb|EEE79991.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = +1

Query: 301 KQGTRKSINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQMS 426
           + GTRK+INSELW+ACAGPLVSLPQVGSLVYYFPQGHSEQ++
Sbjct: 10  QSGTRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVA 51


>gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
          Length = 954

 Score = 80.9 bits (198), Expect = 8e-13
 Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
 Frame = +1

Query: 259 SNAKSPDLEEKVCFKQ-----GTRKSINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQM 423
           S A+S  L+E    K+     G+RK+INSELWHACAGPLV LPQVGSL YYFPQGHSEQ+
Sbjct: 17  SGAQSSILDEMKLLKELQDHSGSRKAINSELWHACAGPLVCLPQVGSLSYYFPQGHSEQV 76

Query: 424 S 426
           +
Sbjct: 77  A 77


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