BLASTX nr result

ID: Coptis25_contig00010421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010421
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26483.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_003540101.1| PREDICTED: uncharacterized protein LOC100775...   148   5e-34
ref|XP_002520070.1| conserved hypothetical protein [Ricinus comm...   145   3e-33
ref|NP_176680.2| uncharacterized protein [Arabidopsis thaliana] ...   144   8e-33
ref|XP_002886790.1| hypothetical protein ARALYDRAFT_893846 [Arab...   142   3e-32

>emb|CBI26483.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/96 (69%), Positives = 76/96 (79%)
 Frame = -3

Query: 402 KDGRMEKVEKEEELNRKIENKLCQRCKQTYDISCNSQSSCRFHPSFFVSRRHDDQKRYYE 223
           + GR  ++E+  E  R  E KLC+RC+Q Y  S N  SSCRFHPSFFV RRHDDQKRYYE
Sbjct: 253 QSGRQTRMERAGEEGR--EEKLCKRCQQMYSPSSNDSSSCRFHPSFFVCRRHDDQKRYYE 310

Query: 222 LRPDDPPYAAKFFDCCGAEDPNAAGCTTDFHVSYDD 115
           L P+DPPYAAKF+DCCGAEDP A+GCTT FHVSYDD
Sbjct: 311 LGPNDPPYAAKFYDCCGAEDPEASGCTTSFHVSYDD 346


>ref|XP_003540101.1| PREDICTED: uncharacterized protein LOC100775288 [Glycine max]
          Length = 92

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/88 (72%), Positives = 74/88 (84%)
 Frame = -3

Query: 378 EKEEELNRKIENKLCQRCKQTYDISCNSQSSCRFHPSFFVSRRHDDQKRYYELRPDDPPY 199
           EKE+E      +K+C+RCKQ YD S N+ +SCRFH SFFV RRHDDQKRYYEL PDDPPY
Sbjct: 4   EKEKEKQWMSNSKVCKRCKQNYDPSSNTSTSCRFHTSFFVCRRHDDQKRYYELGPDDPPY 63

Query: 198 AAKFFDCCGAEDPNAAGCTTDFHVSYDD 115
           AAKF+DCCGAEDP A+GCTT+FHVSYD+
Sbjct: 64  AAKFYDCCGAEDPEASGCTTNFHVSYDE 91


>ref|XP_002520070.1| conserved hypothetical protein [Ricinus communis]
           gi|223540834|gb|EEF42394.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/94 (71%), Positives = 73/94 (77%), Gaps = 5/94 (5%)
 Frame = -3

Query: 381 VEKEEELNR-----KIENKLCQRCKQTYDISCNSQSSCRFHPSFFVSRRHDDQKRYYELR 217
           +EKEEE  +     K + KLC+RCKQ +    NS SSCRFHPSFFV RRHDDQKRYYEL 
Sbjct: 1   MEKEEEKEKGKGKEKEKEKLCKRCKQNFTSISNSPSSCRFHPSFFVCRRHDDQKRYYELG 60

Query: 216 PDDPPYAAKFFDCCGAEDPNAAGCTTDFHVSYDD 115
           PDDPPYAAKF+DCCGAE P A GCTT FHVSYDD
Sbjct: 61  PDDPPYAAKFYDCCGAEQPEAPGCTTSFHVSYDD 94


>ref|NP_176680.2| uncharacterized protein [Arabidopsis thaliana]
           gi|26451133|dbj|BAC42670.1| unknown protein [Arabidopsis
           thaliana] gi|28416763|gb|AAO42912.1| At1g65000
           [Arabidopsis thaliana] gi|332196193|gb|AEE34314.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 83

 Score =  144 bits (363), Expect = 8e-33
 Identities = 62/83 (74%), Positives = 69/83 (83%)
 Frame = -3

Query: 363 LNRKIENKLCQRCKQTYDISCNSQSSCRFHPSFFVSRRHDDQKRYYELRPDDPPYAAKFF 184
           + +K   KLCQRCKQ+Y    N  SSCRFHPSFFV RRHDDQKRYYEL+PDDPPYAAKF+
Sbjct: 1   MEKKEMEKLCQRCKQSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYELKPDDPPYAAKFY 60

Query: 183 DCCGAEDPNAAGCTTDFHVSYDD 115
           DCCGAEDPNA GC T+ H+SYDD
Sbjct: 61  DCCGAEDPNAPGCVTNPHISYDD 83


>ref|XP_002886790.1| hypothetical protein ARALYDRAFT_893846 [Arabidopsis lyrata subsp.
           lyrata] gi|297332631|gb|EFH63049.1| hypothetical protein
           ARALYDRAFT_893846 [Arabidopsis lyrata subsp. lyrata]
          Length = 83

 Score =  142 bits (358), Expect = 3e-32
 Identities = 61/83 (73%), Positives = 69/83 (83%)
 Frame = -3

Query: 363 LNRKIENKLCQRCKQTYDISCNSQSSCRFHPSFFVSRRHDDQKRYYELRPDDPPYAAKFF 184
           +  K   KLCQRCK++Y  S N  SSCRFHPSFFV RRHDDQKRYYEL+P+DPPYAAKF+
Sbjct: 1   METKEMEKLCQRCKKSYTDSSNDTSSCRFHPSFFVCRRHDDQKRYYELKPEDPPYAAKFY 60

Query: 183 DCCGAEDPNAAGCTTDFHVSYDD 115
           DCCGAEDPNA GC T+ H+SYDD
Sbjct: 61  DCCGAEDPNAPGCVTNPHISYDD 83


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