BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010420
         (1281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   560   e-157
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,...   553   e-155
ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2...   546   e-153
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   543   e-152
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi...   541   e-151

>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial [Vitis vinifera]
          Length = 550

 Score =  560 bits (1444), Expect = e-157
 Identities = 276/384 (71%), Positives = 326/384 (84%)
 Frame = -3

Query: 1153 LSFRVEKLGKEEAVTCAFQSWMGDGFPIHSGDIFHAIXXXXXXXXXXRALEVMEWVIRER 974
            LS+R+EKL + E V  AFQSWMG+G PIH G IFHAI          RALEVMEWV+RER
Sbjct: 84   LSWRIEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRER 143

Query: 973  PYKLKELDYSYLLEFTFKFHGVWYGETLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSLA 794
            PY+ KELDYSYLLEFT K HG+  GE LFS +P+EFQN+LLYNNLVIACLD+G IRLSLA
Sbjct: 144  PYRPKELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLA 203

Query: 793  YMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIEA 614
            YM+KMRE G+PIS+LVFNRLI LHSSP R+K IPRIL QMKADKVA HVSTYNIL+KIEA
Sbjct: 204  YMKKMRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEA 263

Query: 613  DGNNIESLTKVFGEMKRANVEPNEITYCILATVHSVARLYSVAEAYVEEIEKSKTGNNWS 434
            + +NIE L KVFGEMK+  VEPNE++YC+LAT H+VA+LY+VAEAYVE +EKS TGNNWS
Sbjct: 264  NEHNIEGLVKVFGEMKQQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWS 323

Query: 433  TLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRAEELWLEMK 254
            TLDVL+ILYGYLGK  DLERT G++Q+LPHVR KS++LAIEAFGR+G+L+RAEELWLE+K
Sbjct: 324  TLDVLIILYGYLGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIK 383

Query: 253  STKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRHLTLGCLKAGLVE 74
            S K+LKSTE FNS+ISVY + G IDKAS +F+EME NGC+ NAITYR+L LGCLKAGL+E
Sbjct: 384  SKKELKSTEQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLE 443

Query: 73   EALKTLEVGMDQTITSTVKRSTPW 2
            EALKTLE+G   TI++ +++S PW
Sbjct: 444  EALKTLELGKGLTISTRIRKSIPW 467


>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  553 bits (1426), Expect = e-155
 Identities = 268/384 (69%), Positives = 321/384 (83%)
 Frame = -3

Query: 1153 LSFRVEKLGKEEAVTCAFQSWMGDGFPIHSGDIFHAIXXXXXXXXXXRALEVMEWVIRER 974
            LS R+EKL + E +  AFQSWM +GFPIH GD+FHAI          RALEVMEWVIRER
Sbjct: 55   LSLRIEKLPRGEPIGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRER 114

Query: 973  PYKLKELDYSYLLEFTFKFHGVWYGETLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSLA 794
            PY+ KELDYSYLLEFT K HG+ +GE LF+RIP EFQN+LLYNNLVIACL++G IRLSL 
Sbjct: 115  PYRPKELDYSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLE 174

Query: 793  YMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIEA 614
            YM+KMRE G+PISHL+FNRLI LHSSPGR+K IP+IL QMKADKV  HVSTYNIL+KIEA
Sbjct: 175  YMKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEA 234

Query: 613  DGNNIESLTKVFGEMKRANVEPNEITYCILATVHSVARLYSVAEAYVEEIEKSKTGNNWS 434
            + +N+E L KVFGEMKR  VEPNE+++CILA  H+VARLY+VAEAYVE +EKS TG+NWS
Sbjct: 235  NEHNVEGLIKVFGEMKRLEVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWS 294

Query: 433  TLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRAEELWLEMK 254
            TLDVL+ILYGYL K   L+R  G +++LPHVR KS++LAIEAFGR+G+L RAEELWLEMK
Sbjct: 295  TLDVLIILYGYLRKGKKLDRIWGTVKELPHVRSKSYILAIEAFGRIGQLGRAEELWLEMK 354

Query: 253  STKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRHLTLGCLKAGLVE 74
            S K LKSTE FNS++S+YC+ GL+ KA+++F+EM+ NGC+PNAIT+RHL LGCLKA LVE
Sbjct: 355  SLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVE 414

Query: 73   EALKTLEVGMDQTITSTVKRSTPW 2
            EALKTLE+GMD T ++ +K S PW
Sbjct: 415  EALKTLEMGMDFTTSNKIKNSIPW 438


>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  546 bits (1408), Expect = e-153
 Identities = 263/385 (68%), Positives = 322/385 (83%)
 Frame = -3

Query: 1156 CLSFRVEKLGKEEAVTCAFQSWMGDGFPIHSGDIFHAIXXXXXXXXXXRALEVMEWVIRE 977
            CLS R+EKL + E+V  AFQSWMG+GFPIH GD+FH I          RALEVMEWV+RE
Sbjct: 58   CLSSRIEKLPRGESVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRE 117

Query: 976  RPYKLKELDYSYLLEFTFKFHGVWYGETLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSL 797
            RPY+LKELDYSYLLEFT K HG+ +GE LF  +P EFQN+LLYNNLVI+CL++G IRLSL
Sbjct: 118  RPYRLKELDYSYLLEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVISCLEKGVIRLSL 177

Query: 796  AYMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIE 617
             YM+KMRE G+PIS+L+FNRLI LHSSPG +K IP+ILAQM+ADKV PHVSTYNIL+KIE
Sbjct: 178  DYMKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIE 237

Query: 616  ADGNNIESLTKVFGEMKRANVEPNEITYCILATVHSVARLYSVAEAYVEEIEKSKTGNNW 437
            A+ +NI+ L KVF +MKR  VEPNE+++CILAT H+ ARLY+VAEAYVE +EKS +G+NW
Sbjct: 238  ANEHNIDGLVKVFNDMKRFKVEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDNW 297

Query: 436  STLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRAEELWLEM 257
            STLDVL+ILYG+LGKE +LERT G++ +LPHVR KS++LAIEA+G++G+L RAEELWLEM
Sbjct: 298  STLDVLIILYGHLGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEM 357

Query: 256  KSTKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRHLTLGCLKAGLV 77
            KS   L+STE FNS++SVYC+ GLI KA+  F+EME NGC+ N+IT+RHL LGCLKA LV
Sbjct: 358  KSIHGLRSTEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLV 417

Query: 76   EEALKTLEVGMDQTITSTVKRSTPW 2
            EEALKTLE+G + T ++ VK STPW
Sbjct: 418  EEALKTLEMGKNLTTSNRVKNSTPW 442


>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial-like [Cucumis sativus]
            gi|449517541|ref|XP_004165804.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  543 bits (1399), Expect = e-152
 Identities = 266/386 (68%), Positives = 318/386 (82%), Gaps = 1/386 (0%)
 Frame = -3

Query: 1156 CLSFRVEKLGKEEAVTCAFQSWMGDGFPIHSGDIFHAIXXXXXXXXXXRALEVMEWVIRE 977
            CLS R+E++ K E V  AF+SWMGDGFPIH GDIFHAI          RALEVMEWVIRE
Sbjct: 59   CLSLRIERIPKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIRE 118

Query: 976  RPYKLKELDYSYLLEFTFKFHGVWYGETLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSL 797
            +PY++ ELDYSYLLEFT K HG+  GE LFS IPVEFQ +LL+NNLVIACLD+G IRLSL
Sbjct: 119  KPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSL 178

Query: 796  AYMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIE 617
            AYMRKMRE G+ ISHLVFNRLI LHSS  R+K IP+IL+QMKADKV  HVSTYNIL+KIE
Sbjct: 179  AYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIE 238

Query: 616  ADGNNIESLTKVFGEMKRANVEPNEITYCILATVHSVARLYSVAEAYVEEIEKSKTGNNW 437
            A+ +NIE L +VF +M+RA VEPNE++YCI+AT H+VA+LY+V EAYVE +EKS  GNNW
Sbjct: 239  ANEHNIEGLMRVFSDMRRAKVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNW 298

Query: 436  STLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRAEELWLEM 257
            ST DVL+ILYGYL KE +LERT G+IQ  PH+  KSF+LAIEAFGR+G L RAEELWLEM
Sbjct: 299  STYDVLIILYGYLNKEKELERTWGIIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEM 358

Query: 256  KSTKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRHLTLGCLKAGLV 77
            K+ + +K+T+ FNSI+SVYCR GLI KA+E+F+++E NGC+PNAIT+RHL  GCLKAGLV
Sbjct: 359  KTKRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLV 418

Query: 76   EEALKTLEVGMDQT-ITSTVKRSTPW 2
            EEALKTL++G + T  T  V++STPW
Sbjct: 419  EEALKTLDLGSNTTSSTKIVRKSTPW 444


>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
            mitochondrial-like [Glycine max]
          Length = 507

 Score =  541 bits (1395), Expect = e-151
 Identities = 261/384 (67%), Positives = 319/384 (83%)
 Frame = -3

Query: 1153 LSFRVEKLGKEEAVTCAFQSWMGDGFPIHSGDIFHAIXXXXXXXXXXRALEVMEWVIRER 974
            LS R+EKL K E+V  AF+SWM DG P+H GDIFHAI          RAL+VMEWVIRER
Sbjct: 41   LSRRIEKLPKGESVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVIRER 100

Query: 973  PYKLKELDYSYLLEFTFKFHGVWYGETLFSRIPVEFQNDLLYNNLVIACLDQGRIRLSLA 794
            PY+ +ELDYSYL+EFT K HG+ +GE LFSRIPVEFQ++LLYNNLVIACLD+G I+LSL 
Sbjct: 101  PYRPRELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKLSLE 160

Query: 793  YMRKMREHGYPISHLVFNRLITLHSSPGRKKAIPRILAQMKADKVAPHVSTYNILLKIEA 614
            YM+KMRE G+PISHLVFNRLI LHSSPGR+K IP++L QMKADKV PHVSTYNIL+KIEA
Sbjct: 161  YMKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEA 220

Query: 613  DGNNIESLTKVFGEMKRANVEPNEITYCILATVHSVARLYSVAEAYVEEIEKSKTGNNWS 434
            + +N+E+L KVFG MK A VEPNEI+YCILA  H+VARLY+  EAYVE +EKS TGNNWS
Sbjct: 221  NEHNLENLVKVFGRMKVAQVEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWS 280

Query: 433  TLDVLLILYGYLGKEDDLERTLGVIQKLPHVRYKSFVLAIEAFGRLGRLDRAEELWLEMK 254
            TLDVLL+LYGYLG + +LER    IQ+LP +R KS++LAIEAFGR+G+L+RAEE+WLEMK
Sbjct: 281  TLDVLLMLYGYLGNQKELERVWATIQELPSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMK 340

Query: 253  STKQLKSTEHFNSIISVYCRRGLIDKASEVFKEMETNGCRPNAITYRHLTLGCLKAGLVE 74
            STK LKS E FNS++SVYC+ G ID+A++++K M+ +GC+PNAITY  L LGCLK+G+ E
Sbjct: 341  STKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAE 400

Query: 73   EALKTLEVGMDQTITSTVKRSTPW 2
            +ALKTL++G+  TI+  V+ STPW
Sbjct: 401  QALKTLDLGLRLTISKRVRNSTPW 424