BLASTX nr result

ID: Coptis25_contig00010413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010413
         (199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517133.1| PREDICTED: uncharacterized protein LOC100794...    70   2e-10
ref|XP_003534265.1| PREDICTED: uncharacterized protein LOC100785...    69   4e-10
ref|XP_002528897.1| protein binding protein, putative [Ricinus c...    64   2e-08
ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245...    57   2e-06
emb|CBI18619.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_003517133.1| PREDICTED: uncharacterized protein LOC100794888 [Glycine max]
          Length = 680

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/61 (60%), Positives = 42/61 (68%)
 Frame = +3

Query: 15  SQDISSPNLRCRTTAPQVPTPAQVQNSPKLPCYTKTSRLFQNLNPSSPKSPSRFSLFKTS 194
           SQ  S+P+LRC+TT         V NSPKL C TKT RLF N NPSSPKSPS FSL K++
Sbjct: 66  SQPSSTPSLRCQTTC-------SVPNSPKLQCKTKTPRLFHNSNPSSPKSPSSFSLLKST 118

Query: 195 L 197
           L
Sbjct: 119 L 119


>ref|XP_003534265.1| PREDICTED: uncharacterized protein LOC100785742 [Glycine max]
          Length = 682

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/61 (60%), Positives = 41/61 (67%)
 Frame = +3

Query: 15  SQDISSPNLRCRTTAPQVPTPAQVQNSPKLPCYTKTSRLFQNLNPSSPKSPSRFSLFKTS 194
           SQ  S+P+LRCRTT         V NSPKL C TKT R F N NPSSPKSPS FSL K++
Sbjct: 66  SQLSSTPSLRCRTTC-------SVPNSPKLQCKTKTPRFFHNSNPSSPKSPSSFSLLKST 118

Query: 195 L 197
           L
Sbjct: 119 L 119


>ref|XP_002528897.1| protein binding protein, putative [Ricinus communis]
           gi|223531651|gb|EEF33477.1| protein binding protein,
           putative [Ricinus communis]
          Length = 705

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   RFQSSQDISSPNLRCRTTAPQVPTPAQVQNSPKLPCY-TKTSRLFQNLNPSSPKSPSRFS 179
           R QS    S+P+LRCRTT    PT + V NSPKL    +K+ RLF   NPSSPKSPS FS
Sbjct: 54  RLQSQPVSSTPSLRCRTTTATTPT-SSVPNSPKLQSKKSKSPRLFHFSNPSSPKSPSSFS 112

Query: 180 LFKTSL 197
           L K +L
Sbjct: 113 LLKATL 118


>ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245763 [Vitis vinifera]
          Length = 725

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/59 (59%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = +3

Query: 27  SSPNLRCRTTAPQVPTPA-QVQNSPKLPCYT-KTSRLFQNLNPSSPKSPSRFSLFKTSL 197
           S   LRCRTT     TPA   QNSP++ C T K+  LFQ  NPSSPKSPS FSL K SL
Sbjct: 60  SHSGLRCRTTT----TPATSAQNSPRIQCKTAKSPGLFQCSNPSSPKSPSSFSLLKASL 114


>emb|CBI18619.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/59 (59%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = +3

Query: 27  SSPNLRCRTTAPQVPTPA-QVQNSPKLPCYT-KTSRLFQNLNPSSPKSPSRFSLFKTSL 197
           S   LRCRTT     TPA   QNSP++ C T K+  LFQ  NPSSPKSPS FSL K SL
Sbjct: 60  SHSGLRCRTTT----TPATSAQNSPRIQCKTAKSPGLFQCSNPSSPKSPSSFSLLKASL 114


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