BLASTX nr result

ID: Coptis25_contig00010408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010408
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269366.1| PREDICTED: uncharacterized protein LOC100247...   179   5e-43
ref|XP_002310778.1| predicted protein [Populus trichocarpa] gi|2...   165   1e-38
ref|XP_002522385.1| COR413-PM2, putative [Ricinus communis] gi|2...   103   4e-20
ref|XP_002274881.1| PREDICTED: uncharacterized protein LOC100267...   103   5e-20
ref|XP_002310187.1| predicted protein [Populus trichocarpa] gi|2...   103   6e-20

>ref|XP_002269366.1| PREDICTED: uncharacterized protein LOC100247855 [Vitis vinifera]
           gi|297735220|emb|CBI17582.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  179 bits (455), Expect = 5e-43
 Identities = 86/147 (58%), Positives = 109/147 (74%)
 Frame = -2

Query: 669 FQWGGTISAIALLILNAMRQSSRTQTSLLVAYLMSSLPTFVFNLFRGEFGYWVAFLAVGA 490
           FQWGGTISA  LLILN + + S  Q+SLLV +L++S P  +FN+ RG+ G W AFLAV A
Sbjct: 44  FQWGGTISATFLLILNQVGRRSSIQSSLLVLFLLTSFPAVLFNIVRGQIGRWFAFLAVAA 103

Query: 489 HLFFPQNFSVSRFVLFVITPSWLAHELHDTIVGVILCLAIGVFLLIEEIRGIGGCANCQW 310
           +LFFP+ F V+ F+L V TP WLA+ L D+IVG + CL +GV L+I EIRGIGGC+ C+ 
Sbjct: 104 NLFFPRKFPVAGFILLVATPDWLANGLRDSIVGGVFCLLLGVCLVITEIRGIGGCSRCEC 163

Query: 309 NLLCVCYCLSISFMFFFTILCLWTGSW 229
           NLLC  + + ISF+FFFTIL L  GSW
Sbjct: 164 NLLCFGFSVCISFLFFFTILYLCLGSW 190


>ref|XP_002310778.1| predicted protein [Populus trichocarpa] gi|222853681|gb|EEE91228.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  165 bits (417), Expect = 1e-38
 Identities = 81/147 (55%), Positives = 104/147 (70%)
 Frame = -2

Query: 669 FQWGGTISAIALLILNAMRQSSRTQTSLLVAYLMSSLPTFVFNLFRGEFGYWVAFLAVGA 490
           FQWGGTI  I LLILN + + S  QT+LLV YL++S PT +F + RG+FGYW+AFLA+ A
Sbjct: 30  FQWGGTIFTIFLLILNRVGRKSSVQTTLLVFYLLTSFPTVLFKVVRGQFGYWIAFLAIAA 89

Query: 489 HLFFPQNFSVSRFVLFVITPSWLAHELHDTIVGVILCLAIGVFLLIEEIRGIGGCANCQW 310
           +LFFP+ F VSRF+LFVI+P  L   L ++I G I CL IG+  +I EIR I G    + 
Sbjct: 90  NLFFPETFPVSRFILFVISPDRLVDGLRNSIAGAIFCLLIGISSVIMEIREIAGNRILEC 149

Query: 309 NLLCVCYCLSISFMFFFTILCLWTGSW 229
           + LC  YCL+ISF+FFFTI  L  G+W
Sbjct: 150 SFLCWGYCLAISFLFFFTIKYLCLGTW 176


>ref|XP_002522385.1| COR413-PM2, putative [Ricinus communis] gi|223538463|gb|EEF40069.1|
           COR413-PM2, putative [Ricinus communis]
          Length = 207

 Score =  103 bits (258), Expect = 4e-20
 Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
 Frame = -2

Query: 675 TWFQWGGTISAIALLILNAMRQSSRTQTSLLVAYLMSSLPTFVFNLFRGEFGYWVAFLAV 496
           ++ +W  + +AI LL+L+     +   TSLLV Y+  SLP+ +FN FRGE G W+AF+AV
Sbjct: 53  SFLKWVSSFAAIYLLVLDRTNWRTNMLTSLLVPYIFFSLPSVLFNFFRGEVGKWIAFIAV 112

Query: 495 GAHLFFPQNF------SVSRFVLFVITPSWLAHELHDTIVGVILCLAIGVFLLIEEIRGI 334
              LFFP++F        S  +L V+ PS+ AH L D  VGV++CL I  +LL E IR  
Sbjct: 113 VLRLFFPRHFPDWLEMPGSLILLLVVAPSFFAHTLKDNWVGVLICLFISCYLLQEHIRAS 172

Query: 333 GGCAN 319
           GG  N
Sbjct: 173 GGFRN 177


>ref|XP_002274881.1| PREDICTED: uncharacterized protein LOC100267774 [Vitis vinifera]
           gi|298205064|emb|CBI38360.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  103 bits (257), Expect = 5e-20
 Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
 Frame = -2

Query: 675 TWFQWGGTISAIALLILNAMRQSSRTQTSLLVAYLMSSLPTFVFNLFRGEFGYWVAFLAV 496
           ++ +W  + SAI LLIL+     +   TSLLV Y+  SLP  +FNL RGE G W+AF+A+
Sbjct: 48  SFLKWVASFSAIYLLILDRTNWRTNMLTSLLVPYIFFSLPPVLFNLLRGEVGKWIAFIAI 107

Query: 495 GAHLFFPQNF------SVSRFVLFVITPSWLAHELHDTIVGVILCLAIGVFLLIEEIRGI 334
              LFFP++F        S  +L V+ P++ AH L  +++G ++CL IG +LL E IR  
Sbjct: 108 VLRLFFPRHFPDWLEMPGSLILLLVVAPNFFAHTLRGSLIGTVICLLIGCYLLQEHIRAS 167

Query: 333 GGCAN 319
           GG  N
Sbjct: 168 GGFRN 172


>ref|XP_002310187.1| predicted protein [Populus trichocarpa] gi|222853090|gb|EEE90637.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  103 bits (256), Expect = 6e-20
 Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
 Frame = -2

Query: 675 TWFQWGGTISAIALLILNAMRQSSRTQTSLLVAYLMSSLPTFVFNLFRGEFGYWVAFLAV 496
           ++ +W  + +AI LLIL+     S   TSLLV Y+  SLP+ +FN FRGE G W+AF+AV
Sbjct: 49  SFLKWVASFAAIYLLILDRTNWRSNMLTSLLVPYIFFSLPSVLFNFFRGEVGRWIAFVAV 108

Query: 495 GAHLFFPQNF------SVSRFVLFVITPSWLAHELHDTIVGVILCLAIGVFLLIEEIRGI 334
              LFFP++F        S  +L V+ P++ AH L  ++VGV +CL I  +LL E IR  
Sbjct: 109 VLRLFFPRHFPDWLEMPGSIILLLVVAPNFFAHTLKGSVVGVFICLIIACYLLQEHIRAS 168

Query: 333 GGCAN 319
           GG  N
Sbjct: 169 GGFRN 173


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