BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010386
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522615.1| pentatricopeptide repeat-containing protein,...   402   e-110
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...   399   e-109
ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...   393   e-107
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...   392   e-107

>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 426

 Score =  402 bits (1034), Expect = e-110
 Identities = 189/300 (63%), Positives = 240/300 (80%)
 Frame = +2

Query: 2    YKHALEISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSL 181
            YKHALEISEWMV N EFEL D DY  RIDLMTKVFGIDAAERYFEGLP+ VKT ETYT+L
Sbjct: 122  YKHALEISEWMVTNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTAL 181

Query: 182  LHSYAGSKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKV 361
            LHSYAG K   +AE  ++R++  N+S  A+ YNEMMTLYMSVGQ+EKV  V+E++KR+K+
Sbjct: 182  LHSYAGVKQLGKAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKI 241

Query: 362  SPDLFTYNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSD 541
            +PD+FTYNLWIS+CAA L+ID V  ILDEM  D   +  W  Y  + +IY+ AG+LVN++
Sbjct: 242  APDIFTYNLWISSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTE 301

Query: 542  GTSVVETERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISS 721
             ++VVE E+ ITQ+E ITYDFLIILY GL++K+K++QIWKSLRM   KMT+RN++C++SS
Sbjct: 302  SSAVVEAEKSITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSS 361

Query: 722  YLMLGHFKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNCNP 901
            Y+MLGH KE  EV +QWK+STTTDFD  ACSRLL A +G+GL + A+    L+I++NC+P
Sbjct: 362  YMMLGHLKEAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDP 421


>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Glycine max]
          Length = 395

 Score =  399 bits (1024), Expect = e-109
 Identities = 192/297 (64%), Positives = 239/297 (80%)
 Frame = +2

Query: 2   YKHALEISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSL 181
           YKHALEISEWMV + E+ELSDSDY  RIDL TKVFGIDAAERYFEGLPL  KT ETYT+L
Sbjct: 93  YKHALEISEWMVSHEEYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTAL 152

Query: 182 LHSYAGSKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKV 361
           LHSYAG+K+T++AE  +QR+++ N+S +A+ YNEMMTLYMSVGQ EKVPSV+E++K++KV
Sbjct: 153 LHSYAGAKLTKKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKV 212

Query: 362 SPDLFTYNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSD 541
           SPD+FTYNLWIS CAA L+ID V+ ILDEMS    S+  W  Y  L +IYI+ G+L N+ 
Sbjct: 213 SPDIFTYNLWISYCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNAS 272

Query: 542 GTSVVETERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISS 721
             ++VETE++ITQ++ ITYDFLIILY GL +K+K++QIW SLRM   KM SRNYIC+ISS
Sbjct: 273 SNTLVETEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISS 332

Query: 722 YLMLGHFKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKN 892
           YLMLGH KEV EV +QWKQSTTTDFD  AC +++ A    GL + A+ L  ++I+KN
Sbjct: 333 YLMLGHTKEVGEVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEKN 389


>ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|222866961|gb|EEF04092.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  397 bits (1019), Expect = e-108
 Identities = 189/300 (63%), Positives = 243/300 (81%), Gaps = 2/300 (0%)
 Frame = +2

Query: 2   YKHALEISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSL 181
           +KHALEISEWMV + EFELSD+D+  RIDLMTKVFG+DAAERYF+GLPL  KT ETYT+L
Sbjct: 56  FKHALEISEWMVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTAL 115

Query: 182 LHSYAGSKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKV 361
           LHSYA +K+ E+AE F++R++  N+   A+MYNEMMTLYMSVGQLEKV  V+E++K +KV
Sbjct: 116 LHSYAAAKLIEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKV 175

Query: 362 SPDLFTYNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSD 541
           +PD+FTYNLWIS+CAA L+ID V+ ILDEMS D   +  W  Y ++ +IY+ AG+LVN++
Sbjct: 176 APDIFTYNLWISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAE 235

Query: 542 GT--SVVETERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVI 715
            +  +VVE E+KITQ+E ITYDFL+ILY GL  K+KI+QIWKSLRM   KMTSRN++C++
Sbjct: 236 SSTAAVVEAEKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCIL 295

Query: 716 SSYLMLGHFKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNC 895
           SSYLMLGH KEV E+ +QWKQSTTTDFD  AC+RLL A++  GL + A+    L+I++NC
Sbjct: 296 SSYLMLGHLKEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIERNC 355


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
           mitochondrial-like [Glycine max]
          Length = 399

 Score =  393 bits (1010), Expect = e-107
 Identities = 191/297 (64%), Positives = 238/297 (80%)
 Frame = +2

Query: 2   YKHALEISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSL 181
           YKHALEISEWMV N E+ELSDSDY VRIDLMT+VFGIDAAERYFEGLPL  KT ETYT+L
Sbjct: 97  YKHALEISEWMVSNEEYELSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTAL 156

Query: 182 LHSYAGSKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKV 361
           LHSYAG+K+TE+AE  +QR+++ N+S +A+ YNEMMTLYMSVGQ EKVP V+E++K++KV
Sbjct: 157 LHSYAGAKLTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKV 216

Query: 362 SPDLFTYNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSD 541
           SPD+FTYNLWIS+CAA L+ID V+ ILDEMS    S+  W  Y  L +IYI+  +L N+ 
Sbjct: 217 SPDIFTYNLWISSCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNAS 276

Query: 542 GTSVVETERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISS 721
             ++VETE++ITQ++ ITYDFLIILY GL +K+K++QIW SL M   KM SRNY+C+ISS
Sbjct: 277 SNTLVETEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISS 336

Query: 722 YLMLGHFKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKN 892
           YLMLG  KEV EV +QWKQSTTTDFD  AC ++L A    GL + A+ L  ++I+KN
Sbjct: 337 YLMLGLTKEVGEVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEKN 393


>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial [Vitis vinifera]
          Length = 396

 Score =  392 bits (1007), Expect = e-107
 Identities = 191/303 (63%), Positives = 239/303 (78%)
 Frame = +2

Query: 2    YKHALEISEWMVRNLEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSL 181
            YKHALEISEWMV + EFELSDSD  VRIDLMT+VFGIDAAERYFEGLP   KT ETYT+L
Sbjct: 92   YKHALEISEWMVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTAL 151

Query: 182  LHSYAGSKMTERAENFFQRVQEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKV 361
            LHSYAG+K+ E+AE  ++R++E NV LN ++YNEMMTLYMSVGQ+EKV  V+E++KR+KV
Sbjct: 152  LHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKV 211

Query: 362  SPDLFTYNLWISACAANLDIDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSD 541
             PDLFTYNLW+S+CAA LDID V+ IL EMS + +++ GW  YR L +IYI AG+LVNS 
Sbjct: 212  VPDLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSA 271

Query: 542  GTSVVETERKITQKESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISS 721
              SVVE     TQ++ ITYDFLIILY GL NK+KI+QIWKSL+M   K+ SR+Y+C++SS
Sbjct: 272  SNSVVEAGTNTTQRDWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSS 331

Query: 722  YLMLGHFKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNCNP 901
            Y+MLGH K+V  V ++WK+STTTDFD     RLL A A   L+++A+    L+I+K+C P
Sbjct: 332  YVMLGHIKDVGIVIDEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLP 391

Query: 902  EDE 910
             DE
Sbjct: 392  TDE 394