BLASTX nr result
ID: Coptis25_contig00010378
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010378 (1397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Viti... 228 2e-57 emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera] 222 2e-55 ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|2... 198 2e-48 emb|CBI38005.3| unnamed protein product [Vitis vinifera] 187 6e-45 ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like ... 187 6e-45 >ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Vitis vinifera] Length = 338 Score = 228 bits (582), Expect = 2e-57 Identities = 129/228 (56%), Positives = 146/228 (64%), Gaps = 6/228 (2%) Frame = -3 Query: 1011 SELTVPADDVANLEWLSHFVEDSFSEFSLQHLVGKTELNPQTKNDKGSEMFIETPGLGPV 832 +ELTVPADD+A+LEWLSHFVEDSFSE+S G Q + + E ETP Sbjct: 109 TELTVPADDLADLEWLSHFVEDSFSEYSAPFPHGTLTEKAQNQTENPPEP--ETPLQIKS 166 Query: 831 GVATSVPAKARSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXSCLIFNNTGQNLD 652 + T PAKARSKR+RTGGRVWS+GS LT+ LI+ NT QN++ Sbjct: 167 CLKTPFPAKARSKRARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPW-LIYPNTCQNVE 225 Query: 651 MFSFMGXXXXXXXXXXXXPEAQ------QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVR 490 F PEA RCSHCGV KTPQWRTGPLGAKTLCNACGVR Sbjct: 226 SFHSAVKPPAKKHKKRLDPEASGSAQPTPHRCSHCGVQKTPQWRTGPLGAKTLCNACGVR 285 Query: 489 YKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRKKEVTQPELAF*P 346 YKSGRLLPEYRPA SPTFSS++HSN+HRKVLEMRRKKEVT+PE P Sbjct: 286 YKSGRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRKKEVTRPESGLAP 333 >emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera] Length = 338 Score = 222 bits (565), Expect = 2e-55 Identities = 125/222 (56%), Positives = 143/222 (64%), Gaps = 6/222 (2%) Frame = -3 Query: 1011 SELTVPADDVANLEWLSHFVEDSFSEFSLQHLVGKTELNPQTKNDKGSEMFIETPGLGPV 832 +ELTVPADD+A+LEWLSHFVEDSFSE+S G Q + + E ETP Sbjct: 109 TELTVPADDLADLEWLSHFVEDSFSEYSAPFPPGTLTEKAQNQTENPPEP--ETPLQIKS 166 Query: 831 GVATSVPAKARSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXSCLIFNNTGQNLD 652 + T PAKARSKR+RTGGRVWS+GS LT+ LI+ NT QN++ Sbjct: 167 CLKTPFPAKARSKRARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPW-LIYPNTCQNVE 225 Query: 651 MFSFMGXXXXXXXXXXXXPEAQ------QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVR 490 F PEA RCSHCGV KT QWRTGPLGAKTLCNACGVR Sbjct: 226 SFHSAVKPPAKKHKKRLDPEASGSAQXTPHRCSHCGVQKTXQWRTGPLGAKTLCNACGVR 285 Query: 489 YKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRKKEVTQP 364 +KSGRLLPEYRPA SPTFSS++HSN+HRKVLEMRRKKEVT+P Sbjct: 286 FKSGRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRKKEVTRP 327 >ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|222850171|gb|EEE87718.1| predicted protein [Populus trichocarpa] Length = 329 Score = 198 bits (504), Expect = 2e-48 Identities = 116/228 (50%), Positives = 130/228 (57%), Gaps = 11/228 (4%) Frame = -3 Query: 1011 SELTVPADDVANLEWLSHFVEDSFSEFSLQHLVGKTELNPQTKNDKGSEM---FIETPGL 841 SEL VP DD+A LEW+SHFV+DS S+ SL K KN E F +T L Sbjct: 101 SELAVPTDDIAELEWVSHFVDDSVSDVSLLVPACKGSSKRHAKNRFEPETKPTFAKTSCL 160 Query: 840 GPVGVATSVPAKARSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXSCLIFNNTGQ 661 P + VP+KAR+KRSR GR WS GS CL+ NT Q Sbjct: 161 FP----SRVPSKARTKRSRPTGRTWSAGS-----NQSETPSSSTSSTSSMPCLVATNTVQ 211 Query: 660 NLDMFSFMGXXXXXXXXXXXXPEAQ--------QRRCSHCGVNKTPQWRTGPLGAKTLCN 505 D S++ + QRRCSHC V KTPQWRTGPLGAKTLCN Sbjct: 212 TADSLSWLSEQPMKISKKRPAVHSSGLMASTQFQRRCSHCQVQKTPQWRTGPLGAKTLCN 271 Query: 504 ACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRKKEVTQPE 361 ACGVRYKSGRL PEYRPA SPTFSS+VHSN+HRKVLEMRRKKEV E Sbjct: 272 ACGVRYKSGRLFPEYRPACSPTFSSEVHSNSHRKVLEMRRKKEVAGAE 319 >emb|CBI38005.3| unnamed protein product [Vitis vinifera] Length = 352 Score = 187 bits (475), Expect = 6e-45 Identities = 110/219 (50%), Positives = 129/219 (58%), Gaps = 5/219 (2%) Frame = -3 Query: 1005 LTVPADDVANLEWLSHFVEDSF-SEFSLQHLVGKTELNPQTKNDKGSEMFIETPG---LG 838 L VPADD+ +LEWLSHFV+DS SE SL L P + S+ E P L Sbjct: 144 LAVPADDLEHLEWLSHFVDDSSASELSL--------LCPAVTGNSPSKRCEEEPRPALLR 195 Query: 837 PVGVATSVPAKARSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXSCLIFNNTGQN 658 T +PAK RSKR R+ GR W+ GS SCLIF NT N Sbjct: 196 TPLFPTPLPAKPRSKRHRSSGRAWAFGS-----HSPSSSPSSSSSSSSTSCLIFANTVHN 250 Query: 657 LDMFSFMGXXXXXXXXXXXXPEAQ-QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVRYKS 481 ++ F + ++Q QRRCSHC V KTPQWRTGPLG KTLCNACGVR+KS Sbjct: 251 MESFYSLEKPPAKKPKKSPSADSQPQRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKS 310 Query: 480 GRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRKKEVTQP 364 GRL PEYRPA SPTFS ++HSN+HRKVLE+RRKKE +P Sbjct: 311 GRLFPEYRPACSPTFSVEIHSNSHRKVLEIRRKKETAEP 349 >ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like [Vitis vinifera] Length = 317 Score = 187 bits (475), Expect = 6e-45 Identities = 110/219 (50%), Positives = 129/219 (58%), Gaps = 5/219 (2%) Frame = -3 Query: 1005 LTVPADDVANLEWLSHFVEDSF-SEFSLQHLVGKTELNPQTKNDKGSEMFIETPG---LG 838 L VPADD+ +LEWLSHFV+DS SE SL L P + S+ E P L Sbjct: 109 LAVPADDLEHLEWLSHFVDDSSASELSL--------LCPAVTGNSPSKRCEEEPRPALLR 160 Query: 837 PVGVATSVPAKARSKRSRTGGRVWSLGSLPLTDXXXXXXXXXXXXXXXXSCLIFNNTGQN 658 T +PAK RSKR R+ GR W+ GS SCLIF NT N Sbjct: 161 TPLFPTPLPAKPRSKRHRSSGRAWAFGS-----HSPSSSPSSSSSSSSTSCLIFANTVHN 215 Query: 657 LDMFSFMGXXXXXXXXXXXXPEAQ-QRRCSHCGVNKTPQWRTGPLGAKTLCNACGVRYKS 481 ++ F + ++Q QRRCSHC V KTPQWRTGPLG KTLCNACGVR+KS Sbjct: 216 MESFYSLEKPPAKKPKKSPSADSQPQRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKS 275 Query: 480 GRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRKKEVTQP 364 GRL PEYRPA SPTFS ++HSN+HRKVLE+RRKKE +P Sbjct: 276 GRLFPEYRPACSPTFSVEIHSNSHRKVLEIRRKKETAEP 314