BLASTX nr result

ID: Coptis25_contig00010376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010376
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301476.1| multidrug resistance protein ABC transporter...   291   5e-90
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   280   2e-86
ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4...   281   2e-86
emb|CBI36841.3| unnamed protein product [Vitis vinifera]              280   2e-86
ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   280   8e-86

>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1508

 Score =  291 bits (745), Expect(2) = 5e-90
 Identities = 158/299 (52%), Positives = 201/299 (67%), Gaps = 18/299 (6%)
 Frame = +2

Query: 107  KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 286
            +L RAVYQDCD+YLLDDVFSAVDAH G+++FKE  R ALK KTILLVTHQV++LHN +LI
Sbjct: 777  QLARAVYQDCDIYLLDDVFSAVDAHTGTDIFKECVRGALKGKTILLVTHQVDFLHNVDLI 836

Query: 287  LVV----IVQSGKYSLNLVQILE---LLLRHIKRPWN*LT*TILRIFLNHQ*HRNQLVHT 445
             V+    IVQSGKY+  LV  L+   L+  H          ++  +  + +         
Sbjct: 837  SVMRDGQIVQSGKYNDLLVSGLDFGALVAAHDT--------SMELVEASSEISSENSPRP 888

Query: 446  PKSPMV-----------EVSHHSEFEKGTSKFIEDGERETGHVSFRVYKTYSIEAYGWWG 592
            PKSP             ++  H + +KGTSK IE+ ER TG++   VYK Y  EA+GWWG
Sbjct: 889  PKSPRGPSKLGEANGENKLLDHPKSDKGTSKLIEEEERATGNIGLHVYKQYCTEAFGWWG 948

Query: 593  IVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFDPSFFFRVYAVLAAVSCVFVLIRNVV 772
            IV  +L+SL+WQ S MAGDYWLA+ET E+R A F PS F  VY ++AAVS VF+ +R++ 
Sbjct: 949  IVVAMLLSLVWQASQMAGDYWLAYETAEERAAMFKPSLFISVYGIIAAVSVVFLAMRSLF 1008

Query: 773  LTYVGLKTAQILCKQILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTI 949
            +T +GLKTAQ L   ILHSILHAPM FFDTTP GRILSR S+DQTN+D+ LP  + +TI
Sbjct: 1009 VTLMGLKTAQKLFGGILHSILHAPMSFFDTTPSGRILSRASSDQTNVDIFLPFMLALTI 1067



 Score = 67.4 bits (163), Expect(2) = 5e-90
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = +1

Query: 1   RVCLLDLDLEMMEFGDQTEIGERGINLSSGQKQRIQ 108
           RVC L+ DLEMMEFGDQTEIGERGINLS GQKQRIQ
Sbjct: 742 RVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRIQ 777


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  280 bits (716), Expect(2) = 2e-86
 Identities = 157/305 (51%), Positives = 196/305 (64%), Gaps = 24/305 (7%)
 Frame = +2

Query: 107  KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 286
            +L RAVYQDCD+YLLDDVFSAVDAH G+++FKE  R AL+NKTILLVTHQV++LHN +LI
Sbjct: 777  QLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECVRGALRNKTILLVTHQVDFLHNVDLI 836

Query: 287  LVV----IVQSGKYS---------LNLVQILELLLRHIKRPWN*LT*TILRIFLNHQ*HR 427
            LV+    IVQSGKY+           LV   E  +  ++     +T              
Sbjct: 837  LVMRDGMIVQSGKYNDLLESGMDFKALVAAHETSMELVEEAGPAIT-------------S 883

Query: 428  NQLVHTPKSPMVEVSH-----------HSEFEKGTSKFIEDGERETGHVSFRVYKTYSIE 574
                  P+SP    +H            S+  K +SK I+D ERETG VSF+VYK Y  E
Sbjct: 884  ENSPKLPQSPQPFSNHGEANGVDKSGDQSKSNKESSKLIKDEERETGKVSFQVYKQYCTE 943

Query: 575  AYGWWGIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFDPSFFFRVYAVLAAVSCVFV 754
            AYGW G+  VLL+SL WQ SLMA DYWLA+ET E    SF+ S F   Y+++AAVS + +
Sbjct: 944  AYGWSGLAGVLLLSLAWQGSLMASDYWLAYETSEKHAKSFNASLFITNYSIIAAVSVLLI 1003

Query: 755  LIRNVVLTYVGLKTAQILCKQILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLF 934
            +IR+  +T +GLKTAQI   QILHSILHAPM FFDTTP GRILSR S DQTN+DL +P F
Sbjct: 1004 VIRSFTVTKLGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDLFVPFF 1063

Query: 935  INMTI 949
            + +T+
Sbjct: 1064 MAVTL 1068



 Score = 66.2 bits (160), Expect(2) = 2e-86
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 1   RVCLLDLDLEMMEFGDQTEIGERGINLSSGQKQRIQ 108
           RVC L+ DLEMME+GDQTEIGERGINLS GQKQRIQ
Sbjct: 742 RVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 777


>ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1504

 Score =  281 bits (719), Expect(2) = 2e-86
 Identities = 158/297 (53%), Positives = 192/297 (64%), Gaps = 16/297 (5%)
 Frame = +2

Query: 107  KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 286
            +L RAVYQDCD+YLLDDVFSAVDAH GSE+FKE  R ALK KTI+LVTHQV++LHN + I
Sbjct: 776  QLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTIILVTHQVDFLHNVDQI 835

Query: 287  LV----VIVQSGKYSLNL---VQILELLLRHIKRPWN*LT*TILRIFLNHQ*---HRNQL 436
            LV    +IVQSGKY   L   +    L++ H          T + +    Q        L
Sbjct: 836  LVTRDGMIVQSGKYDELLDSGMDFKALVVAHE---------TSMALVEQGQGVVMPGENL 886

Query: 437  VHTPKSPMVEVSHHSEF------EKGTSKFIEDGERETGHVSFRVYKTYSIEAYGWWGIV 598
                KSP    S  S         K +SK I++ ERETG VS  +YK Y  EA+GWWGI 
Sbjct: 887  NKPMKSPEARNSGESNSLDRPVSSKKSSKLIKEEERETGKVSLHIYKLYCTEAFGWWGIT 946

Query: 599  AVLLMSLLWQISLMAGDYWLAFETGEDRGASFDPSFFFRVYAVLAAVSCVFVLIRNVVLT 778
             VL+ SLLWQ S+MA DYWLA+ET E+R   F+PS F  +YA++ AVS + V+IR+ + T
Sbjct: 947  VVLIFSLLWQASMMASDYWLAYETSEERAKMFNPSLFISIYAIITAVSIILVVIRSYIFT 1006

Query: 779  YVGLKTAQILCKQILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTI 949
             +GLKTAQI   QIL SIL APM FFDTTP GRILSR S DQTN+D+LLPLF  + I
Sbjct: 1007 LLGLKTAQIFFTQILRSILRAPMSFFDTTPSGRILSRASTDQTNVDVLLPLFTGIVI 1063



 Score = 65.1 bits (157), Expect(2) = 2e-86
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +1

Query: 1   RVCLLDLDLEMMEFGDQTEIGERGINLSSGQKQRIQ 108
           RVC L+ DLEMM++GDQTEIGERGINLS GQKQRIQ
Sbjct: 741 RVCCLEKDLEMMDYGDQTEIGERGINLSGGQKQRIQ 776


>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  280 bits (716), Expect(2) = 2e-86
 Identities = 157/305 (51%), Positives = 196/305 (64%), Gaps = 24/305 (7%)
 Frame = +2

Query: 107  KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 286
            +L RAVYQDCD+YLLDDVFSAVDAH G+++FKE  R AL+NKTILLVTHQV++LHN +LI
Sbjct: 347  QLARAVYQDCDVYLLDDVFSAVDAHTGTDIFKECVRGALRNKTILLVTHQVDFLHNVDLI 406

Query: 287  LVV----IVQSGKYS---------LNLVQILELLLRHIKRPWN*LT*TILRIFLNHQ*HR 427
            LV+    IVQSGKY+           LV   E  +  ++     +T              
Sbjct: 407  LVMRDGMIVQSGKYNDLLESGMDFKALVAAHETSMELVEEAGPAIT-------------S 453

Query: 428  NQLVHTPKSPMVEVSH-----------HSEFEKGTSKFIEDGERETGHVSFRVYKTYSIE 574
                  P+SP    +H            S+  K +SK I+D ERETG VSF+VYK Y  E
Sbjct: 454  ENSPKLPQSPQPFSNHGEANGVDKSGDQSKSNKESSKLIKDEERETGKVSFQVYKQYCTE 513

Query: 575  AYGWWGIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFDPSFFFRVYAVLAAVSCVFV 754
            AYGW G+  VLL+SL WQ SLMA DYWLA+ET E    SF+ S F   Y+++AAVS + +
Sbjct: 514  AYGWSGLAGVLLLSLAWQGSLMASDYWLAYETSEKHAKSFNASLFITNYSIIAAVSVLLI 573

Query: 755  LIRNVVLTYVGLKTAQILCKQILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLF 934
            +IR+  +T +GLKTAQI   QILHSILHAPM FFDTTP GRILSR S DQTN+DL +P F
Sbjct: 574  VIRSFTVTKLGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDLFVPFF 633

Query: 935  INMTI 949
            + +T+
Sbjct: 634  MAVTL 638



 Score = 66.2 bits (160), Expect(2) = 2e-86
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +1

Query: 1   RVCLLDLDLEMMEFGDQTEIGERGINLSSGQKQRIQ 108
           RVC L+ DLEMME+GDQTEIGERGINLS GQKQRIQ
Sbjct: 312 RVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 347


>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  280 bits (716), Expect(2) = 8e-86
 Identities = 150/300 (50%), Positives = 196/300 (65%), Gaps = 19/300 (6%)
 Frame = +2

Query: 107  KLVRAVYQDCDMYLLDDVFSAVDAHIGSELFKEHARAALKNKTILLVTHQVEYLHNTNLI 286
            +L RAVYQD D+YLLDDVFSAVDAH G+E+FKE  R ALK KT++LVTHQV++LHN +LI
Sbjct: 770  QLARAVYQDSDIYLLDDVFSAVDAHTGTEIFKECVRGALKGKTVILVTHQVDFLHNVDLI 829

Query: 287  LVV----IVQSGKYSLNLVQILE---LLLRHIKRPWN*LT*TILRIFLNHQ*HRNQLVHT 445
            +V+    IVQSGKY   L   ++   L+  H          T + +         + ++ 
Sbjct: 830  VVMRDGMIVQSGKYDDLLASGMDFSALVAAHD---------TSMELVEQGAVMTGENLNK 880

Query: 446  PKSPMVEVSHHSEFE------------KGTSKFIEDGERETGHVSFRVYKTYSIEAYGWW 589
            P       S++ E              K  SK I++ ERETG VS  +YK Y  EA+GWW
Sbjct: 881  PLKSPKAASNNREANGESNSLDQPKSGKEGSKLIKEEERETGKVSLHIYKLYCTEAFGWW 940

Query: 590  GIVAVLLMSLLWQISLMAGDYWLAFETGEDRGASFDPSFFFRVYAVLAAVSCVFVLIRNV 769
            GI+AV+ +S+LWQ S+MA DYWLA+ET E+R   F+PS F  +YA++A VS V +++R+ 
Sbjct: 941  GIIAVISLSVLWQASMMASDYWLAYETSEERAQLFNPSMFISIYAIIAVVSVVLIVLRSY 1000

Query: 770  VLTYVGLKTAQILCKQILHSILHAPMPFFDTTPPGRILSRVSNDQTNIDLLLPLFINMTI 949
             +T +GLKTAQI   QILHSILHAPM FFDTTP GRILSR S DQTN+D+ +PLFIN  +
Sbjct: 1001 SVTVLGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPLFINFVV 1060



 Score = 64.3 bits (155), Expect(2) = 8e-86
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +1

Query: 1   RVCLLDLDLEMMEFGDQTEIGERGINLSSGQKQRIQ 108
           RVC L+ DLEMME GDQTEIGERGINLS GQKQRIQ
Sbjct: 735 RVCSLEKDLEMMEHGDQTEIGERGINLSGGQKQRIQ 770


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