BLASTX nr result

ID: Coptis25_contig00010364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010364
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634607.1| PREDICTED: uncharacterized protein LOC100854...    80   4e-13
emb|CBI39245.3| unnamed protein product [Vitis vinifera]               80   4e-13
ref|XP_002325530.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-09
ref|XP_003531826.1| PREDICTED: uncharacterized protein LOC100803...    64   2e-08
ref|XP_003605487.1| hypothetical protein MTR_4g032200 [Medicago ...    64   2e-08

>ref|XP_003634607.1| PREDICTED: uncharacterized protein LOC100854818 isoform 1 [Vitis
           vinifera] gi|359493476|ref|XP_003634608.1| PREDICTED:
           uncharacterized protein LOC100854818 isoform 2 [Vitis
           vinifera]
          Length = 111

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 40/60 (66%), Positives = 45/60 (75%)
 Frame = -2

Query: 586 GLADDPSSSNDKLKAKSGATSGGSVGLRVVIIGLGLAAIVGFSVLLFKIWQKKKREEQHA 407
           GLADDPS+S D  KA+   T G  +G+R+VII LGL A   FSV LFKIWQKKKREEQHA
Sbjct: 32  GLADDPSNSKDVKKAERHDTHGNMIGIRIVIICLGLVAGAAFSVFLFKIWQKKKREEQHA 91


>emb|CBI39245.3| unnamed protein product [Vitis vinifera]
          Length = 110

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 40/60 (66%), Positives = 45/60 (75%)
 Frame = -2

Query: 586 GLADDPSSSNDKLKAKSGATSGGSVGLRVVIIGLGLAAIVGFSVLLFKIWQKKKREEQHA 407
           GLADDPS+S D  KA+   T G  +G+R+VII LGL A   FSV LFKIWQKKKREEQHA
Sbjct: 31  GLADDPSNSKDVKKAERHDTHGNMIGIRIVIICLGLVAGAAFSVFLFKIWQKKKREEQHA 90


>ref|XP_002325530.1| predicted protein [Populus trichocarpa] gi|222862405|gb|EEE99911.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 35/60 (58%), Positives = 44/60 (73%)
 Frame = -2

Query: 586 GLADDPSSSNDKLKAKSGATSGGSVGLRVVIIGLGLAAIVGFSVLLFKIWQKKKREEQHA 407
           GLA DP++  D  K  S + S  SVG++VVI  L + AI+GF++LL KIWQKKKREEQHA
Sbjct: 27  GLASDPANPKDTNKPASHSKS--SVGIKVVIACLSVVAIIGFTMLLIKIWQKKKREEQHA 84


>ref|XP_003531826.1| PREDICTED: uncharacterized protein LOC100803193 [Glycine max]
          Length = 105

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/60 (48%), Positives = 43/60 (71%)
 Frame = -2

Query: 586 GLADDPSSSNDKLKAKSGATSGGSVGLRVVIIGLGLAAIVGFSVLLFKIWQKKKREEQHA 407
           GL ++PS + ++ K  +   S  SVGL+++II LG+  ++ F V LFK+WQ+KKREEQHA
Sbjct: 26  GLDNNPSGAKNENKDVNHHASRSSVGLKIIIIFLGVVTVIAFCVFLFKLWQRKKREEQHA 85


>ref|XP_003605487.1| hypothetical protein MTR_4g032200 [Medicago truncatula]
           gi|355506542|gb|AES87684.1| hypothetical protein
           MTR_4g032200 [Medicago truncatula]
           gi|388501530|gb|AFK38831.1| unknown [Medicago
           truncatula]
          Length = 106

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = -2

Query: 586 GLADDPSSSNDKL-KAKSGATSGGSVGLRVVIIGLGLAAIVGFSVLLFKIWQKKKREEQH 410
           GLAD+ +S + K  K  S   S GS GL+++I+ +G+ A++ F V LFK+WQ+KKREEQH
Sbjct: 26  GLADNNTSDSKKENKDVSAHVSSGSAGLKILIVFVGVLAVIAFGVFLFKLWQRKKREEQH 85

Query: 409 A 407
           A
Sbjct: 86  A 86


Top