BLASTX nr result

ID: Coptis25_contig00010358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010358
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycin...    89   2e-15
ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea ma...    88   3e-15
ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [...    87   3e-15
ref|NP_174536.1| putative plastid developmental protein DAG [Ara...    87   4e-15
emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group] gi...    86   7e-15

>ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycine max]
           gi|255627403|gb|ACU14046.1| unknown [Glycine max]
          Length = 241

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 58/158 (36%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
 Frame = +2

Query: 53  KPTRLLLS----LSPLCTRSTSPAISTRHLXXXXXXXXXAHYSPLKSG-------DWIPP 199
           KP+ L LS    L PL      P+     +         + YSPL SG       D  P 
Sbjct: 32  KPSSLSLSSRRFLFPLSHAIVPPSTRVAGIRCRVNRAGDSAYSPLNSGSSSSSFSDRPPT 91

Query: 200 QIGPLAPDWDVGRWIFVFEFSKFKSYSAIELYQYFIKAVAPVLGSEEEAKKKIYLISCEP 379
           ++ PL P  D   W+ V E    +  +  ++   +I+ +A VLGSEEEAKKKIY +SCE 
Sbjct: 92  EMAPLFPGCDYNHWLIVMENPGGEGANKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCE- 150

Query: 380 ESVGFGAYVDEQTKDKIKFLPGVRDVFKDFFVRSRNMD 493
              GFG  +DE+T +K++ LPGV  V  D +V   N D
Sbjct: 151 RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKD 188


>ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea mays]
           gi|194690760|gb|ACF79464.1| unknown [Zea mays]
          Length = 217

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
 Frame = +2

Query: 35  ARSIIRKPTRLLLSLSPLCTRSTSPAISTRHLXXXXXXXXXAHYSPLKSG---DWIPPQI 205
           ARS++R  +R L S S +        + +            + YSPL+SG   D  P ++
Sbjct: 14  ARSLLRFRSRRLPSSSSIRPARQRAGVGS---VRCMARRPDSSYSPLRSGQGGDRAPTEM 70

Query: 206 GPLAPDWDVGRWIFVFEFSKFKSYSAIELYQYFIKAVAPVLGSEEEAKKKIYLISCEPES 385
            PL P  D   W+ V +    +  +  ++   +I+ +A VLGSEEEAKKKIY +SCE   
Sbjct: 71  APLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVLGSEEEAKKKIYNVSCE-RY 129

Query: 386 VGFGAYVDEQTKDKIKFLPGVRDVFKDFFVRSRNMD 493
            GFG  +DE+T +K++ LPGV  V  D +V + N D
Sbjct: 130 FGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 165


>ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
           distachyon]
          Length = 215

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
 Frame = +2

Query: 158 AHYSPLKSG---DWIPPQIGPLAPDWDVGRWIFVFEFSKFKSYSAIELYQYFIKAVAPVL 328
           A YSPL+SG   D  P ++ PL P  D   W+ V +    +  +  ++   +I+ +A V+
Sbjct: 50  ASYSPLRSGQGGDRAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVV 109

Query: 329 GSEEEAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDFFVRSRNMD 493
           GSEEEAKKKIY +SCE    GFG  +DE+T +K++ LPGV  V  D +V + N D
Sbjct: 110 GSEEEAKKKIYNVSCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 163


>ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein,
           putative; 23108-24430 [Arabidopsis thaliana]
           gi|17381078|gb|AAL36351.1| putative plastid protein
           [Arabidopsis thaliana] gi|20465721|gb|AAM20329.1|
           putative plastid protein [Arabidopsis thaliana]
           gi|332193385|gb|AEE31506.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 229

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 20/144 (13%)
 Frame = +2

Query: 164 YSPLKSG----DWIPPQIGPLAPDWDVGRWIFVFEFSKFKSYSAIELYQYFIKAVAPVLG 331
           YSPLKSG    D  P ++ PL P  D   W+ V +    ++ +  ++   +++ +A ++G
Sbjct: 67  YSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIG 126

Query: 332 SEEEAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDFFVRSRNMD------ 493
           SEEEAKKKIY +SCE    GFG  +DE+T +K++ LPGV  +  D +V   N D      
Sbjct: 127 SEEEAKKKIYNVSCE-RYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELF 185

Query: 494 ----------PRTRPITEVSTKQT 535
                      R R I E++T++T
Sbjct: 186 VNGEIVQRPPERQRKIIELTTQRT 209


>emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group]
           gi|116310924|emb|CAH67862.1| B0403H10-OSIGBa0105A11.14
           [Oryza sativa Indica Group] gi|218195501|gb|EEC77928.1|
           hypothetical protein OsI_17265 [Oryza sativa Indica
           Group] gi|222629485|gb|EEE61617.1| hypothetical protein
           OsJ_16041 [Oryza sativa Japonica Group]
          Length = 223

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
 Frame = +2

Query: 164 YSPLKSG---DWIPPQIGPLAPDWDVGRWIFVFEFSKFKSYSAIELYQYFIKAVAPVLGS 334
           YSPL+SG   D  P ++ PL P  D   W+ V +    +  +  ++   +I+ +A V+GS
Sbjct: 60  YSPLRSGQGGDRAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGS 119

Query: 335 EEEAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDFFVRSRNMD 493
           EEEAKKKIY +SCE    GFG  +DE+T +K++ LPGV  V  D +V + N D
Sbjct: 120 EEEAKKKIYNVSCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 171


Top