BLASTX nr result

ID: Coptis25_contig00010356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010356
         (1915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   661   0.0  
ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   657   0.0  
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   655   0.0  
ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion chann...   645   0.0  
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   644   0.0  

>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
            gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
            channel, putative [Ricinus communis]
          Length = 687

 Score =  661 bits (1706), Expect = 0.0
 Identities = 311/411 (75%), Positives = 351/411 (85%), Gaps = 4/411 (0%)
 Frame = -2

Query: 1221 ILDPRAKWVQEWNRVFLLVCGMGLFLDPLFFYALSISDTCMCLFVDGWFAITITALRCMT 1042
            +LDPRAKWVQEWNR FLLVC  GLF+DPLFFYALS+SDTCMCLF+DGWFA+T+TALRCMT
Sbjct: 71   VLDPRAKWVQEWNRGFLLVCATGLFVDPLFFYALSVSDTCMCLFIDGWFALTVTALRCMT 130

Query: 1041 DALHLWNMWLRLRMVKRSL--GSWGADVDRLSDS--TSARSIALKYLKAKNGFFLDLFVI 874
            DALH+WNMWL+L+M K+    G  G D    S    +S  S+AL+YLKAK GFF DLFVI
Sbjct: 131  DALHVWNMWLQLKMAKKPSIGGGIGGDYGDRSGPRFSSPSSVALRYLKAKKGFFFDLFVI 190

Query: 873  LPLPQVALWIVIPSLLDNGSITLVMSMLLIMFLIQYLPKIYHSVCFLRRMQNFSGYIFGT 694
            LPLPQ+ LW+ IPSLL+ GS+T+VM++ LI+FL QYLPKIYHSVC LRRMQN SGYIFGT
Sbjct: 191  LPLPQIILWVAIPSLLEGGSVTVVMTIFLIIFLFQYLPKIYHSVCLLRRMQNLSGYIFGT 250

Query: 693  VWWGIALNMIAYFVAAHAAGACWYLLGIQRATKCLRAQCRATQGCGPGMLACEQPVYYGT 514
            VWWGIALNMIAYFVA+HAAGACWYLLGIQR  KCL+ +CR TQGCG  +L+C++P+YYGT
Sbjct: 251  VWWGIALNMIAYFVASHAAGACWYLLGIQRTAKCLKEKCRETQGCGLRLLSCKEPIYYGT 310

Query: 513  THIVRDTQRLVWGENKHVRFMCIESAENFDYGAYKWTVPLVINDNRLEKILFPIFWGLMT 334
               VRD  RL W +NK  R  C++S++N+DYGAYKWTV LV N +RLEKILFPIFWGLMT
Sbjct: 311  ASKVRDGARLAWADNKVARATCLDSSDNYDYGAYKWTVQLVTNGSRLEKILFPIFWGLMT 370

Query: 333  LSTFGNLESTTEWSEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQAMHLKMRNMEW 154
            LSTFGNLESTTEW EVVFNII+LTSGLLLVTMLIGNIKVFLHATTSKKQAM LKMRN+EW
Sbjct: 371  LSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEW 430

Query: 153  WMKRRYLPQGFRQRVRQYERQRWAATRGVDEYEMIRNLPGGLRRDIKYHLC 1
            WM++R LP  FR RVR YERQRWAA RGVDE EMIRNLP GLRRDIKYHLC
Sbjct: 431  WMRKRRLPPEFRHRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLC 481


>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
            vinifera]
          Length = 667

 Score =  657 bits (1695), Expect = 0.0
 Identities = 302/407 (74%), Positives = 345/407 (84%)
 Frame = -2

Query: 1221 ILDPRAKWVQEWNRVFLLVCGMGLFLDPLFFYALSISDTCMCLFVDGWFAITITALRCMT 1042
            +LDPRAKWVQEWNRVFLLVC  GLF+DPLFFY LSI+ TCMCLFVDGWFAIT+TALRCMT
Sbjct: 56   VLDPRAKWVQEWNRVFLLVCATGLFVDPLFFYVLSINSTCMCLFVDGWFAITVTALRCMT 115

Query: 1041 DALHLWNMWLRLRMVKRSLGSWGADVDRLSDSTSARSIALKYLKAKNGFFLDLFVILPLP 862
            DALHLWNMWL+L+M KR+    G +  RL D+ SA ++AL+YLKAK GFF DLFVILPLP
Sbjct: 116  DALHLWNMWLQLKMAKRTFHVVGEEGSRLHDA-SASTVALRYLKAKKGFFFDLFVILPLP 174

Query: 861  QVALWIVIPSLLDNGSITLVMSMLLIMFLIQYLPKIYHSVCFLRRMQNFSGYIFGTVWWG 682
            Q+ LW+ IPSLL+ G  T VM++LLI+FL QYLPKIYHSVC L RMQN SGYIFGT+WWG
Sbjct: 175  QIVLWVAIPSLLERGLTTTVMTVLLIIFLFQYLPKIYHSVCLLLRMQNVSGYIFGTIWWG 234

Query: 681  IALNMIAYFVAAHAAGACWYLLGIQRATKCLRAQCRATQGCGPGMLACEQPVYYGTTHIV 502
            I LNMIAYFVA+HAAGACWYLLG+QRA KCL+ +C     C    LAC+ P+YYGTT ++
Sbjct: 235  IVLNMIAYFVASHAAGACWYLLGLQRAAKCLKEECAVANYCSTKTLACKNPIYYGTTSLL 294

Query: 501  RDTQRLVWGENKHVRFMCIESAENFDYGAYKWTVPLVINDNRLEKILFPIFWGLMTLSTF 322
            +D  RL W  NKH R  C++SA+NF+YG Y+WT+ LV NDNRLEKILFP+FWGLMTLSTF
Sbjct: 295  KDRARLAWANNKHARSTCLDSADNFEYGGYRWTIQLVTNDNRLEKILFPLFWGLMTLSTF 354

Query: 321  GNLESTTEWSEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQAMHLKMRNMEWWMKR 142
            GNLESTTEW EV+FNII+LTSGL+LVTMLIGNIKVFLHATTSKKQ M LKMRN+EWWM+R
Sbjct: 355  GNLESTTEWLEVIFNIIVLTSGLILVTMLIGNIKVFLHATTSKKQTMQLKMRNIEWWMRR 414

Query: 141  RYLPQGFRQRVRQYERQRWAATRGVDEYEMIRNLPGGLRRDIKYHLC 1
            R LP GFRQRVR YERQ+WAA RGVDE +M +NLP GLRRDIKYHLC
Sbjct: 415  RKLPLGFRQRVRNYERQKWAAMRGVDECQMTKNLPEGLRRDIKYHLC 461


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
            predicted protein [Populus trichocarpa]
          Length = 635

 Score =  655 bits (1691), Expect = 0.0
 Identities = 310/410 (75%), Positives = 349/410 (85%), Gaps = 3/410 (0%)
 Frame = -2

Query: 1221 ILDPRAKWVQEWNRVFLLVCGMGLFLDPLFFYALSISDTCMCLFVDGWFAITITALRCMT 1042
            +LDPR KWVQEWNRVFLLVC  GLF+DPLFFY LSISDTCMCLFVDGWFAIT+TALRCMT
Sbjct: 20   VLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYVLSISDTCMCLFVDGWFAITVTALRCMT 79

Query: 1041 DALHLWNMWLRLRMVKRSLGSW--GADVDRLSDSTSAR-SIALKYLKAKNGFFLDLFVIL 871
            D L+LWNMWL+L++ KR  G    G D +R     +   S AL+YLKAK GFF DLFVIL
Sbjct: 80   DVLYLWNMWLQLKIAKRPHGGGESGGDGERGGSRVAGPCSSALRYLKAKKGFFFDLFVIL 139

Query: 870  PLPQVALWIVIPSLLDNGSITLVMSMLLIMFLIQYLPKIYHSVCFLRRMQNFSGYIFGTV 691
            PLPQ+ LW+ IPSLL  GS+TL+M++ LI+FL QYLPKI++SVC LRRMQ+ SGYIFGTV
Sbjct: 140  PLPQIVLWVGIPSLLQKGSVTLLMNVFLIIFLFQYLPKIHYSVCLLRRMQSLSGYIFGTV 199

Query: 690  WWGIALNMIAYFVAAHAAGACWYLLGIQRATKCLRAQCRATQGCGPGMLACEQPVYYGTT 511
            WWGIALNMIAYFVA+HAAGACWYLLGIQRA KCL+ QC  T GCG G+L+C++P+YYGTT
Sbjct: 200  WWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCIETPGCGLGLLSCKEPIYYGTT 259

Query: 510  HIVRDTQRLVWGENKHVRFMCIESAENFDYGAYKWTVPLVINDNRLEKILFPIFWGLMTL 331
              V +  R  W +NK  R MC++S + +DYGAYKWTV LV ND+RLEKILFPIFWGLMTL
Sbjct: 260  RKVMEKARWAWADNKLARSMCLDSPDKYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTL 319

Query: 330  STFGNLESTTEWSEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQAMHLKMRNMEWW 151
            STFGNLESTTEW EVVFNII+LTSGLLLVTMLIGNIKVFLHATTSKKQAM LKMRN+EWW
Sbjct: 320  STFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWW 379

Query: 150  MKRRYLPQGFRQRVRQYERQRWAATRGVDEYEMIRNLPGGLRRDIKYHLC 1
            M++R+LP GFRQRVR YERQRWAA RGVDE EMIRNLP GLRRDIKYHLC
Sbjct: 380  MRKRHLPTGFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLC 429


>ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 690

 Score =  645 bits (1663), Expect = 0.0
 Identities = 301/415 (72%), Positives = 345/415 (83%), Gaps = 8/415 (1%)
 Frame = -2

Query: 1221 ILDPRAKWVQEWNRVFLLVCGMGLFLDPLFFYALSISDTCMCLFVDGWFAITITALRCMT 1042
            +LDPRAKWVQEWNRVFLLVC  GLF+DPLFFY LS+SD+CMC+FVDGW A+T+T LRCMT
Sbjct: 70   VLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYVLSVSDSCMCVFVDGWLAVTVTVLRCMT 129

Query: 1041 DALHLWNMWLRLRMVKRSLGSWGADVDRLSDSTSAR-------SIALKYLKAKNGFFLDL 883
            DALH+WNM +R +M KR+ G   A       S+S         S+A+ YLK++ GFF DL
Sbjct: 130  DALHVWNMVIRSKMAKRTFGLGAATASGRGSSSSIGLRDTRPCSVAIGYLKSRTGFFFDL 189

Query: 882  FVILPLPQVALWIVIPSLLDNGSITLVMSMLLIMFLIQYLPKIYHSVCFLRRMQNFSGYI 703
            FVILPLPQ+ LW+ IPSLL+ GS+TLVM++ LI+FL QYLPKIYHSVC LRR QN SGYI
Sbjct: 190  FVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYI 249

Query: 702  FGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRATKCLRAQCRATQGCGPGMLACEQPVY 523
            FGTVWWGIALNMIAYFVA+HAAGACWYLLGIQRA KCL+ QC  T GCG  +L+C+ P+Y
Sbjct: 250  FGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVQCAKTSGCGMKILSCQTPIY 309

Query: 522  YGTTHI-VRDTQRLVWGENKHVRFMCIESAENFDYGAYKWTVPLVINDNRLEKILFPIFW 346
            YG+  + VRD  RL W EN+ VR  C+   ++++YGAY+WTV LV NDNRLEKILFPIFW
Sbjct: 310  YGSNSLLVRDKARLAWAENREVRHTCLNGPDSYNYGAYRWTVQLVTNDNRLEKILFPIFW 369

Query: 345  GLMTLSTFGNLESTTEWSEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQAMHLKMR 166
            GLMTLSTFGNLESTTEW EVVFNII+LTSGLLLVTMLIGNIKVFLHATTSKKQAM LKMR
Sbjct: 370  GLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMR 429

Query: 165  NMEWWMKRRYLPQGFRQRVRQYERQRWAATRGVDEYEMIRNLPGGLRRDIKYHLC 1
            N+EWWM++R LP GFRQRVR YERQRWAA RGVDE+EM +NLP GLRRDIKYHLC
Sbjct: 430  NIEWWMRKRRLPLGFRQRVRNYERQRWAAMRGVDEFEMTKNLPEGLRRDIKYHLC 484


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  644 bits (1662), Expect = 0.0
 Identities = 302/418 (72%), Positives = 348/418 (83%), Gaps = 11/418 (2%)
 Frame = -2

Query: 1221 ILDPRAKWVQEWNRVFLLVCGMGLFLDPLFFYALSISDTCMCLFVDGWFAITITALRCMT 1042
            +LDPRAKWVQEWNRVFLLVC  GLF+DPLFFYALS+SD+CMC+FVDGW A+T+T LRCMT
Sbjct: 69   VLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLRCMT 128

Query: 1041 DALHLWNMWLRLRMVKRSLGSWGADVDRLSDSTSA----------RSIALKYLKAKNGFF 892
            DALH+WNM +R +M KR+ G  GA        TS+          RS+A+ YL ++ GFF
Sbjct: 129  DALHVWNMVIRCKMAKRTFGL-GASTTSSGRGTSSSSVGLRDTRPRSVAMGYLMSRTGFF 187

Query: 891  LDLFVILPLPQVALWIVIPSLLDNGSITLVMSMLLIMFLIQYLPKIYHSVCFLRRMQNFS 712
             DLFVILPLPQ+ LW+ IPSLL+ GS+TLVM++ LI+FL QYLPKI+HSVC LRR QN S
Sbjct: 188  FDLFVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLS 247

Query: 711  GYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRATKCLRAQCRATQGCGPGMLACEQ 532
            GYIFGTVWWGIALNMIAYFVA+HAAGACWYLLGIQRA KCL+ QC  T GCG  +L+C+ 
Sbjct: 248  GYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVQCEKTSGCGMKILSCQT 307

Query: 531  PVYYGT-THIVRDTQRLVWGENKHVRFMCIESAENFDYGAYKWTVPLVINDNRLEKILFP 355
            P+YYG+ + +VRD  RL W EN+ VR  C+   +N++YGAY+W+V LV NDNRLEKILFP
Sbjct: 308  PIYYGSNSFLVRDRARLAWAENREVRHTCLNGPDNYNYGAYRWSVQLVTNDNRLEKILFP 367

Query: 354  IFWGLMTLSTFGNLESTTEWSEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQAMHL 175
            IFWGLMTLSTFGNLESTTEW EVVFNII+LTSGLLLVTMLIGNIKVFLHATTSKKQAM L
Sbjct: 368  IFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQL 427

Query: 174  KMRNMEWWMKRRYLPQGFRQRVRQYERQRWAATRGVDEYEMIRNLPGGLRRDIKYHLC 1
            KMRN+EWWM++R LP GFRQRVR YERQRWAA RGVDE+EM +NLP GLRRDIKYHLC
Sbjct: 428  KMRNIEWWMRKRRLPLGFRQRVRNYERQRWAAMRGVDEFEMTKNLPEGLRRDIKYHLC 485


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