BLASTX nr result

ID: Coptis25_contig00010338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010338
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525268.1| PREDICTED: uncharacterized protein LOC100818...    80   3e-13
ref|XP_002455056.1| hypothetical protein SORBIDRAFT_03g003675 [S...    74   2e-11
ref|XP_002334765.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|NP_001042217.2| Os01g0182300 [Oryza sativa Japonica Group] g...    68   8e-10
dbj|BAJ89863.1| predicted protein [Hordeum vulgare subsp. vulgare]     68   8e-10

>ref|XP_003525268.1| PREDICTED: uncharacterized protein LOC100818788 [Glycine max]
          Length = 106

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 47/102 (46%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
 Frame = -1

Query: 484 MDIGNWWNSGRRSFRVNQRYMESE-FDELAASNFSIAESSKPXXXXXXXXXXXXXXXXXF 308
           MDI  W NSGRR+ ++ + Y E E  + L+A+      S+K                   
Sbjct: 1   MDIKGWCNSGRRTIQLGKSYNEIEHINSLSATG----TSNKLRWKLLWMKLKKEKKKIFE 56

Query: 307 SPVPVQVPYDPYTYSQNFDQGIAWTEPDNLPRSFSARYADPS 182
           S    QVPYD YTYSQNFDQG A  EPDNL RSFS R+ADPS
Sbjct: 57  SASSFQVPYDQYTYSQNFDQGTALDEPDNLSRSFSVRFADPS 98


>ref|XP_002455056.1| hypothetical protein SORBIDRAFT_03g003675 [Sorghum bicolor]
           gi|241927031|gb|EES00176.1| hypothetical protein
           SORBIDRAFT_03g003675 [Sorghum bicolor]
          Length = 175

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = -1

Query: 307 SPVPVQVPYDPYTYSQNFDQGIAWTEPDNLPRSFSARYADPSRLFQR 167
           +P P + PYD Y+Y+QNFD G AW EPDNL RSFSAR+A PSR+FQR
Sbjct: 126 APAPHREPYDAYSYAQNFDDGEAWVEPDNLSRSFSARFAVPSRVFQR 172


>ref|XP_002334765.1| predicted protein [Populus trichocarpa]
           gi|224141805|ref|XP_002324253.1| predicted protein
           [Populus trichocarpa] gi|222865687|gb|EEF02818.1|
           predicted protein [Populus trichocarpa]
           gi|222874478|gb|EEF11609.1| predicted protein [Populus
           trichocarpa]
          Length = 99

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 31/47 (65%), Positives = 38/47 (80%)
 Frame = -1

Query: 295 VQVPYDPYTYSQNFDQGIAWTEPDNLPRSFSARYADPSRLFQRNISV 155
           VQ  YDP  YSQNFDQG  WT+P++L RSFSARYADPSR+ Q++ +V
Sbjct: 52  VQASYDPDEYSQNFDQGTDWTKPEDLSRSFSARYADPSRVLQKSNTV 98


>ref|NP_001042217.2| Os01g0182300 [Oryza sativa Japonica Group]
           gi|55296269|dbj|BAD68049.1| unknown protein [Oryza
           sativa Japonica Group] gi|125569288|gb|EAZ10803.1|
           hypothetical protein OsJ_00638 [Oryza sativa Japonica
           Group] gi|215693036|dbj|BAG88456.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255672942|dbj|BAF04131.2| Os01g0182300 [Oryza sativa
           Japonica Group]
          Length = 171

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = -1

Query: 292 QVPYDPYTYSQNFDQGIAWTEPDNLPRSFSARYADPSRLFQR 167
           +VPYD Y+Y+QNFD G AW EP+NL RSFSAR+A PSR+ QR
Sbjct: 127 RVPYDAYSYAQNFDDGAAWVEPENLSRSFSARFAVPSRVLQR 168


>dbj|BAJ89863.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 163

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -1

Query: 307 SPVPVQVPYDPYTYSQNFDQGIAWTEPDNLPRSFSARYADPSRLFQR 167
           S    + PYD Y+Y+QNFD G AW EPDNL RSFSAR+A PSR+ QR
Sbjct: 114 SAAAAREPYDAYSYAQNFDDGAAWVEPDNLSRSFSARFAVPSRVLQR 160


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