BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010332
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding prote...   603   e-170
ref|XP_002523592.1| RNA-binding protein, putative [Ricinus commu...   597   e-168
ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|2...   582   e-164
ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|2...   582   e-163
ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homol...   573   e-161

>ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform 1
            [Vitis vinifera] gi|359480890|ref|XP_003632540.1|
            PREDICTED: uncharacterized RNA-binding protein
            C660.15-like isoform 2 [Vitis vinifera]
            gi|296082418|emb|CBI21423.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  603 bits (1554), Expect = e-170
 Identities = 295/362 (81%), Positives = 322/362 (88%), Gaps = 2/362 (0%)
 Frame = +3

Query: 306  MDNKLVVLGIPWDVDTEGLREYMGKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 485
            MDNKLVVLGIPWDVDT+GLR+YM KFG+L DVIVMKER+TGRSRGFGY TF S EDAKK 
Sbjct: 1    MDNKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKV 60

Query: 486  LTAEHFLGSRMLEVKIATPKEEM-RAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 662
            L++EHFLG+RMLEVK+ATPKEEM RAP KK+TRIFVARIP SV EAAFRSYFETYG+ITD
Sbjct: 61   LSSEHFLGNRMLEVKVATPKEEMMRAPIKKVTRIFVARIPDSVNEAAFRSYFETYGEITD 120

Query: 663  LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 842
            LYMPKD  +KGHRGIGFITF S++SVD+LM ETHEL GS +VVDRATPK+E+ RP SRV 
Sbjct: 121  LYMPKDHGSKGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEEEFRPVSRVP 180

Query: 843  HGGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 1022
             GGYGAYNAY+TAATRYAALGAPTLYDHP + YGRG  E  R +GKKIFVGRLPQEASA+
Sbjct: 181  QGGYGAYNAYITAATRYAALGAPTLYDHPGSVYGRG--ESTRAMGKKIFVGRLPQEASAE 238

Query: 1023 DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 1202
            DLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICGQQVAIDSA
Sbjct: 239  DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 298

Query: 1203 APLDDAGPSGGYMM-NPEPFGGYGGPMRSYSRMYGSLDFDDWGYGSAGPSRPSRMDWRYR 1379
             PLDDAG SG +MM + EPFGG+GGPMR+Y RMYGSLDFDDWGYG  G  RPSR DWRYR
Sbjct: 299  TPLDDAGSSGNFMMDSAEPFGGFGGPMRTYGRMYGSLDFDDWGYGIGG-GRPSRADWRYR 357

Query: 1380 PY 1385
            PY
Sbjct: 358  PY 359


>ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
            gi|223537154|gb|EEF38787.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 359

 Score =  597 bits (1538), Expect = e-168
 Identities = 288/362 (79%), Positives = 322/362 (88%), Gaps = 2/362 (0%)
 Frame = +3

Query: 306  MDNKLVVLGIPWDVDTEGLREYMGKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 485
            MD KLVVLGIPW+VDTEGLREYM KFG+LDD IVMKER++GRSRGFGY TFAS EDAK A
Sbjct: 1    MDRKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSA 60

Query: 486  LTAEHFLGSRMLEVKIATPK-EEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITD 662
            L++EHFLG+RMLEVK+ATPK EEMRAPAKK+TRIFVARIPPSVTE  FRS+FE YG+I D
Sbjct: 61   LSSEHFLGNRMLEVKVATPKQEEMRAPAKKVTRIFVARIPPSVTETTFRSHFEKYGEIID 120

Query: 663  LYMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVS 842
            LYMPKD S+K HRGIGFITF S+DSVDSLM++THEL GST+VVDRATPK++D RP  R++
Sbjct: 121  LYMPKDHSSKAHRGIGFITFASADSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMA 180

Query: 843  HGGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASAD 1022
            HGGYGAYNAY++AATRYAALGAPTLYDHP   YG G  EP RG+GKKIFVGRLPQEA+ +
Sbjct: 181  HGGYGAYNAYISAATRYAALGAPTLYDHPGPMYGTG--EPARGVGKKIFVGRLPQEATPE 238

Query: 1023 DLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSA 1202
            DLRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF E+GVA+RVSRRSHEICG QVAIDSA
Sbjct: 239  DLRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAIDSA 298

Query: 1203 APLDDAGPSGGYMMNPEP-FGGYGGPMRSYSRMYGSLDFDDWGYGSAGPSRPSRMDWRYR 1379
             P+DDAGPSG +MMN  P FGGYGGP+R++ RMYGSLD+DDWGYG  G +RPSR DWRYR
Sbjct: 299  TPIDDAGPSGNFMMNAAPSFGGYGGPLRNFGRMYGSLDYDDWGYG-MGSARPSRADWRYR 357

Query: 1380 PY 1385
            PY
Sbjct: 358  PY 359


>ref|XP_002307266.1| predicted protein [Populus trichocarpa] gi|222856715|gb|EEE94262.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  582 bits (1501), Expect = e-164
 Identities = 281/370 (75%), Positives = 316/370 (85%), Gaps = 10/370 (2%)
 Frame = +3

Query: 306  MDNKLVVLGIPWDVDTEGLREYMGKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 485
            M  KLV+LGIPW++DTEGLR+YM KFG+L+D IVMKER++GRSRGFGY TF S EDAK  
Sbjct: 1    MSQKLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60

Query: 486  LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 665
            L+ EHFLG RMLE+K+ATPKEEMRAP KK TRIFVARIPPSVTE  FRS+FE YG+I DL
Sbjct: 61   LSGEHFLGKRMLEIKVATPKEEMRAPTKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120

Query: 666  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 845
            YMPKD S+K HRGIGFIT+ S+DSVDSLM+ETHEL GST+VVDRATPK++D RP +R + 
Sbjct: 121  YMPKDHSSKAHRGIGFITYASADSVDSLMAETHELGGSTVVVDRATPKEDDFRPIARTAP 180

Query: 846  GGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 1025
            GGYGAYNAY++AATRYAALGAPTLYDHP   YGRG  E  RG+GKKIFVGRLPQEAS +D
Sbjct: 181  GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASTED 238

Query: 1026 LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 1205
            LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA 
Sbjct: 239  LRQYFGRFGHIIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298

Query: 1206 PLDDAGPSGGYMMN-PEPFGGYGGPMRSYSRMYGSLDFDD---------WGYGSAGPSRP 1355
            P+DDAGPSG +MM+ PEPFGGYGGPMR++ RMYG+LD+DD         WGYG  G +RP
Sbjct: 299  PIDDAGPSGNFMMSAPEPFGGYGGPMRNFGRMYGTLDYDDAGAYMVPSKWGYG-MGSARP 357

Query: 1356 SRMDWRYRPY 1385
            SR DWRYRPY
Sbjct: 358  SRADWRYRPY 367


>ref|XP_002310138.1| predicted protein [Populus trichocarpa] gi|222853041|gb|EEE90588.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  582 bits (1499), Expect = e-163
 Identities = 283/370 (76%), Positives = 317/370 (85%), Gaps = 10/370 (2%)
 Frame = +3

Query: 306  MDNKLVVLGIPWDVDTEGLREYMGKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 485
            MD KLVVLGIPW++DTEGLREYM KFG L+D IVMKER++GRSRGFGY TF S EDAK  
Sbjct: 1    MDRKLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60

Query: 486  LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 665
            L++EHFLG RMLEVK+ATPKEEMRAP+KK TRIFVARIPPSVTE  FRS+FE YG+I DL
Sbjct: 61   LSSEHFLGKRMLEVKVATPKEEMRAPSKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL 120

Query: 666  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 845
            YMPKD S+K HRGIGFIT+ S+DSVD+LM+ETHEL GST+VVDRATPK++D RP  R++ 
Sbjct: 121  YMPKDHSSKAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAP 180

Query: 846  GGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGRGLPEPVRGLGKKIFVGRLPQEASADD 1025
            GGYGAYNAY++AATRYAALGAPTLYDHP   YGRG  E  RG+GKKIFVGRLPQEASA+D
Sbjct: 181  GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRG--ESSRGMGKKIFVGRLPQEASAED 238

Query: 1026 LRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICGQQVAIDSAA 1205
            LRQYFGRFG I DVYVPKDPKRTGHRGFGFVTF EDGVA+RVSRRSHEICG QVAIDSA 
Sbjct: 239  LRQYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT 298

Query: 1206 PLDDAGPSGGYMMN-PEPFGGYGGPMRSYSRMYGSLDFDD---------WGYGSAGPSRP 1355
            P+DDAGPSG +MM+ PEPFG Y GPMR++ RMYG+LD+DD         WGYG  G +RP
Sbjct: 299  PIDDAGPSGNFMMSGPEPFGSYAGPMRNFGRMYGTLDYDDASAYMVPSKWGYG-MGSARP 357

Query: 1356 SRMDWRYRPY 1385
            SR DWRYRPY
Sbjct: 358  SRADWRYRPY 367


>ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
            sativus] gi|449502733|ref|XP_004161727.1| PREDICTED:
            RNA-binding protein Musashi homolog 1-like [Cucumis
            sativus]
          Length = 377

 Score =  573 bits (1476), Expect = e-161
 Identities = 286/378 (75%), Positives = 319/378 (84%), Gaps = 18/378 (4%)
 Frame = +3

Query: 306  MDNKLVVLGIPWDVDTEGLREYMGKFGKLDDVIVMKERTTGRSRGFGYATFASTEDAKKA 485
            MD KLVVLGIPWDVDTEGLREYM KFG+L+D IVMKER+TGRSRGFGY TFA+ EDAK A
Sbjct: 1    MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60

Query: 486  LTAEHFLGSRMLEVKIATPKEEMRAPAKKMTRIFVARIPPSVTEAAFRSYFETYGDITDL 665
            L++EHFLG+RM+EVK+ATPKEEMRAP K++TRIFVARI  +VTEAAFRS+FE YG+ITDL
Sbjct: 61   LSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDL 120

Query: 666  YMPKDQSTKGHRGIGFITFESSDSVDSLMSETHELEGSTIVVDRATPKDEDIRPPSRVSH 845
            YMPKDQ +K HRGIGFITF SSDSV++LM++THEL GS +VVDRATPKD+D RP  ++  
Sbjct: 121  YMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQ 180

Query: 846  ------GGYGAYNAYMTAATRYAALGAPTLYDHPVAAYGR---GLPEPVRGLGKKIFVGR 998
                  GGYGAYNAY++AATRYAALGAPTLYDHP + YG     +P   RG+GKKIFVGR
Sbjct: 181  GGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGSMSPTVPLEFRGMGKKIFVGR 240

Query: 999  LPQEASADDLRQYFGRFGRISDVYVPKDPKRTGHRGFGFVTFTEDGVAERVSRRSHEICG 1178
            LPQEASADDLRQYFGRFGRI DVYVPKDPKR+GHRGFGFVTF EDGVA+RVSRRSHEICG
Sbjct: 241  LPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICG 300

Query: 1179 QQVAIDSAAPLDDA-------GPSGGYMMN--PEPFGGYGGPMRSYSRMYGSLDFDDWGY 1331
            QQVAIDSA PLDDA       G SG +MMN   + FGGY GPMR+Y RMYGSLDFDDWGY
Sbjct: 301  QQVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGY 360

Query: 1332 GSAGPSRPSRMDWRYRPY 1385
            G  G  RPSR DWRYRPY
Sbjct: 361  GIGG-GRPSRADWRYRPY 377