BLASTX nr result

ID: Coptis25_contig00010331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010331
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516088.1| conserved hypothetical protein [Ricinus comm...    97   9e-18
ref|XP_003588966.1| hypothetical protein MTR_1g015840 [Medicago ...    73   1e-10
ref|XP_002308548.1| predicted protein [Populus trichocarpa] gi|2...    71   7e-10
ref|XP_003603168.1| hypothetical protein MTR_3g104620 [Medicago ...    65   5e-08
gb|AFW75534.1| hypothetical protein ZEAMMB73_775197 [Zea mays]         62   2e-07

>ref|XP_002516088.1| conserved hypothetical protein [Ricinus communis]
            gi|223544574|gb|EEF46090.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 230

 Score = 97.1 bits (240), Expect = 9e-18
 Identities = 54/102 (52%), Positives = 71/102 (69%), Gaps = 7/102 (6%)
 Frame = +2

Query: 806  LLTIRTQRRRLSASLSVKL--SGILSRKEEQQQP----KQMESKPEDSIWTKTIMLGEKC 967
            LLT     R L  ++S+K+  S  ++RK++Q+      K+ + K EDSIW KTI+LGEKC
Sbjct: 118  LLTKSASTRNLVRNMSIKIPRSMSMARKDQQEDKIYHKKKGKLKHEDSIWMKTIILGEKC 177

Query: 968  KVPDEE-DAIIYDERGNRLSAYPVRTPRSLPVSRSNSFSLPS 1090
            KVPDE+ DA IYD +GNR++ Y  +TPRSLPVSR NSF  PS
Sbjct: 178  KVPDEDQDAAIYDSKGNRITTYHPKTPRSLPVSRQNSFIEPS 219


>ref|XP_003588966.1| hypothetical protein MTR_1g015840 [Medicago truncatula]
            gi|355478014|gb|AES59217.1| hypothetical protein
            MTR_1g015840 [Medicago truncatula]
          Length = 232

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
 Frame = +2

Query: 821  TQRRRLSASLSVKLSGILS------RKEEQQQPKQMESKPEDSIWTKTIMLGEKCKVPDE 982
            T  RRLS  LS+K+   LS      +KEE     + + KP++SIW KTI+LGEKC   +E
Sbjct: 129  TSERRLSFKLSIKMPRSLSLARNWDKKEENDIGNREKLKPDESIWMKTIILGEKCVPDEE 188

Query: 983  EDAIIYDERGNRLSAYPVRTPRSLPVSRSNSFS 1081
            EDAIIY+ +G R+SAY    PR+   S S S S
Sbjct: 189  EDAIIYEGKGKRISAY---HPRNSISSSSMSLS 218


>ref|XP_002308548.1| predicted protein [Populus trichocarpa] gi|222854524|gb|EEE92071.1|
            predicted protein [Populus trichocarpa]
          Length = 223

 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
 Frame = +2

Query: 845  SLSVKLSGILSRKE---EQQQPKQMESKPEDSIWTKTIMLGEKCKVPDEEDAIIYDERGN 1015
            S+ +  S  L RK+   ++ Q K+ + K EDS+W KTI+LGEKCKVPDE++A+IYD +G 
Sbjct: 123  SMKLPRSMSLVRKDGDDKKNQKKKGKPKHEDSVWMKTIILGEKCKVPDEDEAVIYDGKGK 182

Query: 1016 RLSAYPVRTPRSLPVSRSNSFSLPS*ESCNGHPCDDQSHFT 1138
            R+S Y  +   S   S+ +  ++PS +   G   ++   F+
Sbjct: 183  RISTYHKKASCSRQNSQIDLNAIPSQDREKGVSREEGEEFS 223


>ref|XP_003603168.1| hypothetical protein MTR_3g104620 [Medicago truncatula]
            gi|355492216|gb|AES73419.1| hypothetical protein
            MTR_3g104620 [Medicago truncatula]
          Length = 243

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
 Frame = +2

Query: 821  TQRRRLSASLSVKLSGI---LSRKEEQQQPKQMESKP----EDSIWTKTIMLGEKCKVPD 979
            T  RR S SLS+K+  +   LS  +     K+ + KP    E+S+W KTI+LG+KC   +
Sbjct: 128  TSERRTSFSLSIKMPTLPRNLSIAKNWDHLKEEKFKPLVKTEESVWMKTIILGDKCVPDE 187

Query: 980  EEDAIIYDERGNRLSAYPVRT--PRSLPVSRSNSF 1078
            E+D +I++ +G ++SAY  +T    S+ +SR NSF
Sbjct: 188  EDDPVIFEGKGKKISAYHPKTISSMSMSISRQNSF 222


>gb|AFW75534.1| hypothetical protein ZEAMMB73_775197 [Zea mays]
          Length = 217

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 56/201 (27%), Positives = 83/201 (41%), Gaps = 8/201 (3%)
 Frame = +2

Query: 506  HPAFSFSFLTASVAATILIIAALCGXXXXXXXXXXXXXXXXXXXMQDVTRTEATNTKXXX 685
            H A +FSFL A VAAT+ + +++C                            ATN     
Sbjct: 19   HDAVTFSFLVACVAATVTLASSMCSACGRKPKA-------------------ATNADPAG 59

Query: 686  XXXXXXXXXXXXXXXXXXTFVLETE--RITXXXXXXXXXXXXLLTIRTQRRRLSASLSVK 859
                                 +E E  R++             L   T RRRLS S+S K
Sbjct: 60   TGSSVSGGSGSQEAGGAEEAAVEEEVVRLSPELAMHGAIEPVALPSSTSRRRLSISVSKK 119

Query: 860  LSGILSRK-----EEQQQPKQMESKPEDSIWTKTIMLGEKCKVPDEEDAIIYDERGNRLS 1024
            LS  +  K      E +     + + ED++W K I+LGEKC++P E +A   D   + ++
Sbjct: 120  LSLNIPDKLRLSRREHKDHHHHKVESEDTLWKKGIILGEKCRIPGEREAECADPDDDDIA 179

Query: 1025 AYPV-RTPRSLPVSRSNSFSL 1084
            A    R+  S PVSRS+SF++
Sbjct: 180  AANFRRSSYSRPVSRSSSFAM 200


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