BLASTX nr result
ID: Coptis25_contig00010328
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010328 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo... 88 8e-16 ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 83 2e-14 ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2... 81 8e-14 ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2... 79 5e-13 ref|XP_002889610.1| predicted protein [Arabidopsis lyrata subsp.... 77 1e-12 >ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 374 Score = 87.8 bits (216), Expect = 8e-16 Identities = 38/78 (48%), Positives = 58/78 (74%), Gaps = 2/78 (2%) Frame = -3 Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHF--DTKPRGPFKELISDESGPLYRDFSMKEYVQ 112 K KS+EHRVLANR+G R+S +CFF HF T+ GP KEL+S+E P+YR+ S+K+++ Sbjct: 295 KFKSVEHRVLANRIGPRVSVACFFTIHFYPSTRIYGPIKELLSEEXPPVYRETSLKDFIA 354 Query: 111 FFFSEGLDGKIGLKNFKV 58 +++++GLDG L +F + Sbjct: 355 YYYNKGLDGNSALDHFMI 372 >ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 369 Score = 83.2 bits (204), Expect = 2e-14 Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 2/78 (2%) Frame = -3 Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHF--DTKPRGPFKELISDESGPLYRDFSMKEYVQ 112 K KS+EHRVLANR+G R+S +CFF H T+ GP KEL+S+E P+YR+ S+K+++ Sbjct: 290 KFKSVEHRVLANRIGPRVSVACFFTLHLYPTTRIYGPIKELLSEEKPPVYRETSLKDFIA 349 Query: 111 FFFSEGLDGKIGLKNFKV 58 ++ ++GLDG L +F + Sbjct: 350 YYDNKGLDGNSALDHFMI 367 >ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1| predicted protein [Populus trichocarpa] Length = 379 Score = 81.3 bits (199), Expect = 8e-14 Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 2/78 (2%) Frame = -3 Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHFD--TKPRGPFKELISDESGPLYRDFSMKEYVQ 112 K KS+EHRVLANR+G RIS +CFF F +K GP KEL+S+ + P+YR+ ++ EY+ Sbjct: 302 KFKSVEHRVLANRVGPRISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYLS 361 Query: 111 FFFSEGLDGKIGLKNFKV 58 +F+ GLDG L +FK+ Sbjct: 362 YFYDHGLDGTSPLIHFKL 379 >ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1| predicted protein [Populus trichocarpa] Length = 366 Score = 78.6 bits (192), Expect = 5e-13 Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 2/78 (2%) Frame = -3 Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHFD--TKPRGPFKELISDESGPLYRDFSMKEYVQ 112 K S+EHRVLANR+G R+S + FF + + ++P GP KEL+S+ES P YR+ ++++YV Sbjct: 289 KFISVEHRVLANRIGPRVSVASFFSTNLNPNSRPYGPIKELLSEESPPKYRETTVRDYVA 348 Query: 111 FFFSEGLDGKIGLKNFKV 58 +F +GLDG L +FK+ Sbjct: 349 YFIHKGLDGTSALLHFKL 366 >ref|XP_002889610.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335452|gb|EFH65869.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 362 Score = 77.4 bits (189), Expect = 1e-12 Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%) Frame = -3 Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHFDTKPR--GPFKELISDESGPLYRDFSMKEYVQ 112 K KS+EHRVLAN G RIS +CFF + PR GP K+++S+++ P YRD ++ EY + Sbjct: 285 KFKSVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKDILSEQNPPKYRDTTITEYAK 344 Query: 111 FFFSEGLDGKIGLKNFKV 58 F+ S+G DG GL K+ Sbjct: 345 FYRSKGFDGTSGLLYLKI 362