BLASTX nr result

ID: Coptis25_contig00010328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010328
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...    88   8e-16
ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    83   2e-14
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002889610.1| predicted protein [Arabidopsis lyrata subsp....    77   1e-12

>ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Glycine max]
          Length = 374

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/78 (48%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
 Frame = -3

Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHF--DTKPRGPFKELISDESGPLYRDFSMKEYVQ 112
           K KS+EHRVLANR+G R+S +CFF  HF   T+  GP KEL+S+E  P+YR+ S+K+++ 
Sbjct: 295 KFKSVEHRVLANRIGPRVSVACFFTIHFYPSTRIYGPIKELLSEEXPPVYRETSLKDFIA 354

Query: 111 FFFSEGLDGKIGLKNFKV 58
           +++++GLDG   L +F +
Sbjct: 355 YYYNKGLDGNSALDHFMI 372


>ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Glycine max]
          Length = 369

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
 Frame = -3

Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHF--DTKPRGPFKELISDESGPLYRDFSMKEYVQ 112
           K KS+EHRVLANR+G R+S +CFF  H    T+  GP KEL+S+E  P+YR+ S+K+++ 
Sbjct: 290 KFKSVEHRVLANRIGPRVSVACFFTLHLYPTTRIYGPIKELLSEEKPPVYRETSLKDFIA 349

Query: 111 FFFSEGLDGKIGLKNFKV 58
           ++ ++GLDG   L +F +
Sbjct: 350 YYDNKGLDGNSALDHFMI 367


>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
 Frame = -3

Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHFD--TKPRGPFKELISDESGPLYRDFSMKEYVQ 112
           K KS+EHRVLANR+G RIS +CFF   F   +K  GP KEL+S+ + P+YR+ ++ EY+ 
Sbjct: 302 KFKSVEHRVLANRVGPRISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYLS 361

Query: 111 FFFSEGLDGKIGLKNFKV 58
           +F+  GLDG   L +FK+
Sbjct: 362 YFYDHGLDGTSPLIHFKL 379


>ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
 Frame = -3

Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHFD--TKPRGPFKELISDESGPLYRDFSMKEYVQ 112
           K  S+EHRVLANR+G R+S + FF  + +  ++P GP KEL+S+ES P YR+ ++++YV 
Sbjct: 289 KFISVEHRVLANRIGPRVSVASFFSTNLNPNSRPYGPIKELLSEESPPKYRETTVRDYVA 348

Query: 111 FFFSEGLDGKIGLKNFKV 58
           +F  +GLDG   L +FK+
Sbjct: 349 YFIHKGLDGTSALLHFKL 366


>ref|XP_002889610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335452|gb|EFH65869.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 362

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = -3

Query: 285 KLKSIEHRVLANRLGLRISASCFFKYHFDTKPR--GPFKELISDESGPLYRDFSMKEYVQ 112
           K KS+EHRVLAN  G RIS +CFF  +    PR  GP K+++S+++ P YRD ++ EY +
Sbjct: 285 KFKSVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKDILSEQNPPKYRDTTITEYAK 344

Query: 111 FFFSEGLDGKIGLKNFKV 58
           F+ S+G DG  GL   K+
Sbjct: 345 FYRSKGFDGTSGLLYLKI 362


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