BLASTX nr result

ID: Coptis25_contig00010320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010320
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307364.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ ...   292   3e-77
ref|XP_002531676.1| Phospho-2-dehydro-3-deoxyheptonate aldolase ...   290   2e-76
gb|ACM45080.1| 3-deoxy-D-arabino-heptulosonate-7-phosphate synth...   289   3e-76
ref|XP_003635302.1| PREDICTED: phospho-2-dehydro-3-deoxyheptonat...   285   4e-75
ref|XP_002301067.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ ...   285   4e-75

>ref|XP_002307364.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/
           3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase
           [Populus trichocarpa] gi|118486265|gb|ABK94974.1|
           unknown [Populus trichocarpa]
           gi|222856813|gb|EEE94360.1|
           2-dehydro-3-deoxyphosphoheptonate aldolase/
           3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase
           [Populus trichocarpa]
          Length = 531

 Score =  292 bits (748), Expect = 3e-77
 Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 16/215 (7%)
 Frame = -2

Query: 601 MALTSSSVITPKSLLQPKQVSHSFSLVPSKPN--TLKPISAIHAAEP------------- 467
           M+LTSSS+I  KSL+ P    H      +KP+  TL+ ISA+H+A+P             
Sbjct: 1   MSLTSSSIIPSKSLI-PSNKPHQPCFFTTKPSRSTLR-ISAVHSADPSKSPPPIKTPAAT 58

Query: 466 -TKSTTITPPLVTKPGKWSIDSWKSKKALQLPTYPNKEDFESVLKTLETFPPIVFAGEAR 290
            TK+TT+ P +    GKW+++SWKSKKALQLP YP+KEDF+SVLKTL+ FPPIVFAGEAR
Sbjct: 59  STKATTVAPTVNVGAGKWTVESWKSKKALQLPEYPDKEDFDSVLKTLDAFPPIVFAGEAR 118

Query: 289 KLEERLADAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMYGGQLPVIKVG 110
            LEE+LA+AAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM+GGQ+PVIKVG
Sbjct: 119 SLEEKLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVIKVG 178

Query: 109 RMAGQFAKPRSDNFEEKDGVKLPSYRGDNINGDAF 5
           R+AGQFAKPRSD FEEKDGVKLPSYRGDN+NGDAF
Sbjct: 179 RLAGQFAKPRSDPFEEKDGVKLPSYRGDNVNGDAF 213


>ref|XP_002531676.1| Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528707|gb|EEF30720.1|
           Phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplast precursor, putative [Ricinus communis]
          Length = 533

 Score =  290 bits (741), Expect = 2e-76
 Identities = 150/213 (70%), Positives = 176/213 (82%), Gaps = 12/213 (5%)
 Frame = -2

Query: 607 TTMALTSSSVITPKSLLQPKQVSH--SFSLVP--SKPNTLKPISAIHAAEPTKSTTI--- 449
           +T++  S     P+++  P Q  H  SFSL+P  SKP +L  I+A+HAAEPTK++T+   
Sbjct: 4   STLSSKSLYANNPRTVFNPNQQHHQSSFSLLPGNSKPRSLPSITAVHAAEPTKNSTVSVK 63

Query: 448 -TP--PLVTKPG--KWSIDSWKSKKALQLPTYPNKEDFESVLKTLETFPPIVFAGEARKL 284
            TP  P V  PG  KW++DSWK+KKALQLP YP+ +  E+VLKT+E FPPIVFAGEAR L
Sbjct: 64  TTPSSPPVAAPGTGKWTVDSWKTKKALQLPEYPDADKLENVLKTIEAFPPIVFAGEARSL 123

Query: 283 EERLADAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMYGGQLPVIKVGRM 104
           EE+LADAAMGNAFLLQGGDCAESFKEF+ANNIRDTFRILLQMGVVLM+GGQ+PVIKVGRM
Sbjct: 124 EEKLADAAMGNAFLLQGGDCAESFKEFSANNIRDTFRILLQMGVVLMFGGQMPVIKVGRM 183

Query: 103 AGQFAKPRSDNFEEKDGVKLPSYRGDNINGDAF 5
           AGQFAKPRSD FEEK+GVKLPSY+GDNINGDAF
Sbjct: 184 AGQFAKPRSDPFEEKNGVKLPSYKGDNINGDAF 216


>gb|ACM45080.1| 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase 01 [Vitis
           vinifera]
          Length = 532

 Score =  289 bits (740), Expect = 3e-76
 Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 16/215 (7%)
 Frame = -2

Query: 601 MALTSSSVITPKSLLQP----KQVSH--SFSLVPSKPN--TLKPISAIHAAEPTKSTTIT 446
           MAL+++S ++ KS+ Q       +SH  S SLVPSK +  +L PISA+HAAEP K+  + 
Sbjct: 1   MALSNASTLSSKSVYQTHSLFSSLSHQPSSSLVPSKTHLRSLHPISAVHAAEPAKNPVVV 60

Query: 445 --PPLVTKP------GKWSIDSWKSKKALQLPTYPNKEDFESVLKTLETFPPIVFAGEAR 290
             PP  + P      GKW++DSWK+KKALQLP YPN+ D ESVL+TLE FPPIVFAGEAR
Sbjct: 61  DKPPKTSSPSVPAGSGKWTVDSWKTKKALQLPEYPNESDLESVLQTLEAFPPIVFAGEAR 120

Query: 289 KLEERLADAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMYGGQLPVIKVG 110
            LEERL DAAMGNAFLLQGGDCAESFKEF+ANNIRDTFRI+LQMG VLM+GGQ+PVIKVG
Sbjct: 121 SLEERLGDAAMGNAFLLQGGDCAESFKEFSANNIRDTFRIILQMGAVLMFGGQVPVIKVG 180

Query: 109 RMAGQFAKPRSDNFEEKDGVKLPSYRGDNINGDAF 5
           RMAGQFAKPRSD FEEK+GVKLPSY+GDNINGDAF
Sbjct: 181 RMAGQFAKPRSDPFEEKNGVKLPSYKGDNINGDAF 215


>ref|XP_003635302.1| PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 1,
           chloroplastic [Vitis vinifera]
          Length = 532

 Score =  285 bits (730), Expect = 4e-75
 Identities = 149/215 (69%), Positives = 174/215 (80%), Gaps = 16/215 (7%)
 Frame = -2

Query: 601 MALTSSSVITPKSLLQP----KQVSH--SFSLVPSKPN--TLKPISAIHAAEPTKSTTIT 446
           MAL+++S ++ KS+ Q       +SH  S SLVP K +  +L PISA+HAAEP K+  + 
Sbjct: 1   MALSNASTLSSKSVHQTHSLFSSLSHQPSSSLVPGKTHLRSLHPISAVHAAEPAKNPVVV 60

Query: 445 --PPLVTKP------GKWSIDSWKSKKALQLPTYPNKEDFESVLKTLETFPPIVFAGEAR 290
             PP  + P      GKW++DSWK+KKALQLP YPN+ + ESVL+TLE FPPIVFAGEAR
Sbjct: 61  DKPPKTSSPSVPAGSGKWTVDSWKTKKALQLPEYPNESELESVLQTLEAFPPIVFAGEAR 120

Query: 289 KLEERLADAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMYGGQLPVIKVG 110
            LEERL DAAMGNAFLLQGGDCAESFKEF+ANNIRDTFRI+LQMG VLM+GGQ+PVIKVG
Sbjct: 121 SLEERLGDAAMGNAFLLQGGDCAESFKEFSANNIRDTFRIILQMGAVLMFGGQVPVIKVG 180

Query: 109 RMAGQFAKPRSDNFEEKDGVKLPSYRGDNINGDAF 5
           RMAGQFAKPRSD FEEK+GVKLPSY+GDNINGDAF
Sbjct: 181 RMAGQFAKPRSDPFEEKNGVKLPSYKGDNINGDAF 215


>ref|XP_002301067.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/
           3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase
           [Populus trichocarpa] gi|222842793|gb|EEE80340.1|
           2-dehydro-3-deoxyphosphoheptonate aldolase/
           3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase
           [Populus trichocarpa]
          Length = 531

 Score =  285 bits (730), Expect = 4e-75
 Identities = 144/213 (67%), Positives = 165/213 (77%), Gaps = 14/213 (6%)
 Frame = -2

Query: 601 MALTSSSVITPKSLLQPKQVSHSFSLVPSKPNTLKPISAIHAAEP--------------T 464
           M+LTSSSVI  KSL+   +  H          ++  ISA+H+A+P              T
Sbjct: 1   MSLTSSSVIPTKSLIPSNKPHHPCFFTTKPSRSILHISAVHSADPSKSPSPIKTPAATST 60

Query: 463 KSTTITPPLVTKPGKWSIDSWKSKKALQLPTYPNKEDFESVLKTLETFPPIVFAGEARKL 284
           K+ T+ P      GKW+++SWKSKKALQLP YPNKED +SVL+TL+ FPPIVFAGEAR L
Sbjct: 61  KAATVAPTTNVGTGKWTVESWKSKKALQLPEYPNKEDLDSVLETLDAFPPIVFAGEARNL 120

Query: 283 EERLADAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMYGGQLPVIKVGRM 104
           EERLA+AAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLM+GGQ+PVIKVGRM
Sbjct: 121 EERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRM 180

Query: 103 AGQFAKPRSDNFEEKDGVKLPSYRGDNINGDAF 5
           AGQFAKPRSD  EEK+GVKLPSYRGDN+NGDAF
Sbjct: 181 AGQFAKPRSDPLEEKNGVKLPSYRGDNVNGDAF 213


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