BLASTX nr result

ID: Coptis25_contig00010303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010303
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285482.1| PREDICTED: probable beta-1,3-galactosyltrans...    76   3e-12
emb|CAN78789.1| hypothetical protein VITISV_012733 [Vitis vinifera]    74   2e-11
gb|ACJ84604.1| unknown [Medicago truncatula]                           73   3e-11
ref|XP_003550187.1| PREDICTED: probable beta-1,3-galactosyltrans...    72   5e-11
ref|XP_003544608.1| PREDICTED: probable beta-1,3-galactosyltrans...    72   5e-11

>ref|XP_002285482.1| PREDICTED: probable beta-1,3-galactosyltransferase 10 [Vitis
           vinifera] gi|296082123|emb|CBI21128.3| unnamed protein
           product [Vitis vinifera]
          Length = 339

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/51 (76%), Positives = 43/51 (84%)
 Frame = -3

Query: 154 RLWQDAENRLLLKDLLMKNTDQRLKVLTVEDKLMVLG*KDLAKRITEVEMD 2
           RLWQDAENR +L +LLMKN+ +R KVLTVEDKLMVLG KDL KRI E EMD
Sbjct: 36  RLWQDAENRNILANLLMKNSVRRPKVLTVEDKLMVLGCKDLEKRIVEAEMD 86


>emb|CAN78789.1| hypothetical protein VITISV_012733 [Vitis vinifera]
          Length = 409

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/51 (74%), Positives = 42/51 (82%)
 Frame = -3

Query: 154 RLWQDAENRLLLKDLLMKNTDQRLKVLTVEDKLMVLG*KDLAKRITEVEMD 2
           RLWQDAENR +L +LLMKN+ +R KVLTVEDKL VLG KDL KRI E EMD
Sbjct: 36  RLWQDAENRNILANLLMKNSVRRPKVLTVEDKLTVLGCKDLEKRIVEAEMD 86


>gb|ACJ84604.1| unknown [Medicago truncatula]
          Length = 185

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%)
 Frame = -3

Query: 154 RLWQDAENRLLLKDLLMKNTDQRLKVLTVEDKLMVLG*KDLAKRITEVEMD 2
           RLWQDAENR LL  LL KN+ QR KVLTVEDKLMVLG +DL +RI E EM+
Sbjct: 45  RLWQDAENRNLLASLLKKNSSQRPKVLTVEDKLMVLGCRDLERRIVEAEME 95


>ref|XP_003550187.1| PREDICTED: probable beta-1,3-galactosyltransferase 10-like [Glycine
           max]
          Length = 338

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%)
 Frame = -3

Query: 154 RLWQDAENRLLLKDLLMKNTDQRLKVLTVEDKLMVLG*KDLAKRITEVEMD 2
           RLWQDAENR LL  LL KN+ QR KVLTVEDKLMVLG +DL +RI E EM+
Sbjct: 40  RLWQDAENRNLLASLLKKNSAQRPKVLTVEDKLMVLGCRDLERRIVEAEME 90


>ref|XP_003544608.1| PREDICTED: probable beta-1,3-galactosyltransferase 10-like [Glycine
           max]
          Length = 343

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/51 (72%), Positives = 41/51 (80%)
 Frame = -3

Query: 154 RLWQDAENRLLLKDLLMKNTDQRLKVLTVEDKLMVLG*KDLAKRITEVEMD 2
           RLWQDAENR LL  LL KN+ QR KVLTVEDKLMVLG +DL +RI E EM+
Sbjct: 42  RLWQDAENRNLLASLLKKNSAQRPKVLTVEDKLMVLGCRDLERRIVEAEME 92


Top