BLASTX nr result
ID: Coptis25_contig00010281
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010281
(690 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi... 173 3e-41
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi... 173 3e-41
ref|XP_002468698.1| hypothetical protein SORBIDRAFT_01g050460 [S... 170 2e-40
ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri... 169 4e-40
ref|NP_001141786.1| uncharacterized protein LOC100273922 [Zea ma... 169 5e-40
>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
gi|355520705|gb|AET01159.1| CCR4-NOT transcription
complex subunit [Medicago truncatula]
Length = 2410
Score = 173 bits (439), Expect = 3e-41
Identities = 84/112 (75%), Positives = 96/112 (85%)
Frame = -1
Query: 681 QFLSKILSVTVRVIQKDAEDKKVAFNPRPYFRLFINWLLDLGPSDTGLESASLQVLTAFA 502
+ LSKIL+VTVR I KDAE+KKV+FNPRP+FRLFINWLLDLG + + A+LQ+LTAFA
Sbjct: 1977 KLLSKILAVTVRFIVKDAEEKKVSFNPRPFFRLFINWLLDLGSLEPVTDGANLQILTAFA 2036
Query: 501 NAFLSLQPLKVPGFSFAWLELVSHRCFMPKLLNGNNQKGWPSFQRLLVALFK 346
NAF +LQPLKVPGFSFAWLELVSHR FMPK+L GN QKGWP QRLLV LF+
Sbjct: 2037 NAFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNGQKGWPYIQRLLVDLFQ 2088
Score = 139 bits (351), Expect = 4e-31
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -2
Query: 221 VLLVLLHDFPEFLCNYHFSFCDVIPPSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE 42
VLLVLLHDFPEFLC+YHF+FCDVIPPSCIQMRN+ILSAFPR+MRLPDPSTPNLKIDLL E
Sbjct: 2113 VLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQE 2172
Query: 41 ISQSPSIFSEVDA 3
I+QSP I SEVDA
Sbjct: 2173 ITQSPRILSEVDA 2185
>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
gi|355520704|gb|AET01158.1| CCR4-NOT transcription
complex subunit [Medicago truncatula]
Length = 2418
Score = 173 bits (439), Expect = 3e-41
Identities = 84/112 (75%), Positives = 96/112 (85%)
Frame = -1
Query: 681 QFLSKILSVTVRVIQKDAEDKKVAFNPRPYFRLFINWLLDLGPSDTGLESASLQVLTAFA 502
+ LSKIL+VTVR I KDAE+KKV+FNPRP+FRLFINWLLDLG + + A+LQ+LTAFA
Sbjct: 1977 KLLSKILAVTVRFIVKDAEEKKVSFNPRPFFRLFINWLLDLGSLEPVTDGANLQILTAFA 2036
Query: 501 NAFLSLQPLKVPGFSFAWLELVSHRCFMPKLLNGNNQKGWPSFQRLLVALFK 346
NAF +LQPLKVPGFSFAWLELVSHR FMPK+L GN QKGWP QRLLV LF+
Sbjct: 2037 NAFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNGQKGWPYIQRLLVDLFQ 2088
Score = 139 bits (351), Expect = 4e-31
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = -2
Query: 221 VLLVLLHDFPEFLCNYHFSFCDVIPPSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE 42
VLLVLLHDFPEFLC+YHF+FCDVIPPSCIQMRN+ILSAFPR+MRLPDPSTPNLKIDLL E
Sbjct: 2113 VLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQE 2172
Query: 41 ISQSPSIFSEVDA 3
I+QSP I SEVDA
Sbjct: 2173 ITQSPRILSEVDA 2185
>ref|XP_002468698.1| hypothetical protein SORBIDRAFT_01g050460 [Sorghum bicolor]
gi|241922552|gb|EER95696.1| hypothetical protein
SORBIDRAFT_01g050460 [Sorghum bicolor]
Length = 2371
Score = 170 bits (431), Expect = 2e-40
Identities = 84/114 (73%), Positives = 94/114 (82%)
Frame = -1
Query: 687 KVQFLSKILSVTVRVIQKDAEDKKVAFNPRPYFRLFINWLLDLGPSDTGLESASLQVLTA 508
K LSKILSVTVR IQKDAE+KK +FNPRPYFRLFINWL DL +D + ++ Q+LTA
Sbjct: 1939 KASILSKILSVTVRTIQKDAEEKKASFNPRPYFRLFINWLYDLTTTDGHHDGSNFQILTA 1998
Query: 507 FANAFLSLQPLKVPGFSFAWLELVSHRCFMPKLLNGNNQKGWPSFQRLLVALFK 346
FANAF LQPL+VP +SFAWLELVSHR FMPKLL N+QKGWP FQRLLVALFK
Sbjct: 1999 FANAFHMLQPLRVPAWSFAWLELVSHRSFMPKLLMCNSQKGWPFFQRLLVALFK 2052
Score = 136 bits (342), Expect = 4e-30
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -2
Query: 221 VLLVLLHDFPEFLCNYHFSFCDVIPPSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE 42
VLLVLLHDFPEFLC+YHFSFCDVIP SCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE
Sbjct: 2077 VLLVLLHDFPEFLCDYHFSFCDVIPSSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE 2136
Query: 41 ISQSPSIFSEVD 6
IS +P I S+VD
Sbjct: 2137 ISIAPRIMSDVD 2148
>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
gi|223548824|gb|EEF50313.1| ccr4-not transcription
complex, putative [Ricinus communis]
Length = 2330
Score = 169 bits (429), Expect = 4e-40
Identities = 82/110 (74%), Positives = 94/110 (85%)
Frame = -1
Query: 675 LSKILSVTVRVIQKDAEDKKVAFNPRPYFRLFINWLLDLGPSDTGLESASLQVLTAFANA 496
LSKIL+VTVR IQKD+E+KK++FNPRPYFRLF+NWLLDL D ++ +LQ+LTAFANA
Sbjct: 1901 LSKILAVTVRFIQKDSEEKKLSFNPRPYFRLFVNWLLDLVSPDPIIDGTNLQILTAFANA 1960
Query: 495 FLSLQPLKVPGFSFAWLELVSHRCFMPKLLNGNNQKGWPSFQRLLVALFK 346
F +LQPLKVP FSFAWLELVSHR FMPKLL GN QKGWP QRLLV LF+
Sbjct: 1961 FHNLQPLKVPAFSFAWLELVSHRSFMPKLLTGNAQKGWPYVQRLLVDLFQ 2010
Score = 138 bits (348), Expect = 9e-31
Identities = 64/73 (87%), Positives = 69/73 (94%)
Frame = -2
Query: 221 VLLVLLHDFPEFLCNYHFSFCDVIPPSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE 42
VLLVLLHDFPEFLC+YHF+FCDVIPPSCIQMRN+ILSAFPRNMRLPDPSTPNLKIDLL E
Sbjct: 2035 VLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPE 2094
Query: 41 ISQSPSIFSEVDA 3
I ++P I SEVDA
Sbjct: 2095 IREAPHILSEVDA 2107
>ref|NP_001141786.1| uncharacterized protein LOC100273922 [Zea mays]
gi|194705914|gb|ACF87041.1| unknown [Zea mays]
Length = 445
Score = 169 bits (428), Expect = 5e-40
Identities = 85/114 (74%), Positives = 94/114 (82%)
Frame = -1
Query: 687 KVQFLSKILSVTVRVIQKDAEDKKVAFNPRPYFRLFINWLLDLGPSDTGLESASLQVLTA 508
K LSKILSVTVR IQKDAE+KK +FNPRPYFRLFINWL DL +D +S++ QVLTA
Sbjct: 13 KASILSKILSVTVRSIQKDAEEKKASFNPRPYFRLFINWLYDLTTTDGHHDSSNFQVLTA 72
Query: 507 FANAFLSLQPLKVPGFSFAWLELVSHRCFMPKLLNGNNQKGWPSFQRLLVALFK 346
FANAF LQPL+VP +SFAWLELVSHR FMPKLL N+QKGWP FQRLLVAL K
Sbjct: 73 FANAFHMLQPLRVPAWSFAWLELVSHRSFMPKLLMCNSQKGWPFFQRLLVALLK 126
Score = 136 bits (342), Expect = 4e-30
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -2
Query: 221 VLLVLLHDFPEFLCNYHFSFCDVIPPSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE 42
VLLVLLHDFPEFLC+YHFSFCDVIP SCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE
Sbjct: 151 VLLVLLHDFPEFLCDYHFSFCDVIPSSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAE 210
Query: 41 ISQSPSIFSEVD 6
IS +P I S+VD
Sbjct: 211 ISIAPRIMSDVD 222