BLASTX nr result

ID: Coptis25_contig00010279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010279
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
dbj|BAJ85387.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   5e-08
gb|EEC72055.1| hypothetical protein OsI_04965 [Oryza sativa Indi...    61   1e-07
ref|XP_003549184.1| PREDICTED: uncharacterized protein At4g15970...    60   2e-07
ref|XP_002533447.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|222870602|gb|EEF07733.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -3

Query: 433 HANCCVGIEKKVPDLKAILNDWKNFTALSPQEKEAKGSSTAYPWSAPNKCR 281
           HANCC G+E KV DLK +L DWKN+T+L P E+    +S +  W AP  CR
Sbjct: 310 HANCCYGLETKVHDLKIVLEDWKNYTSLPPNER----ASASPSWRAPQNCR 356


>dbj|BAJ85387.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 362

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = -3

Query: 433 HANCCVGIEKKVPDLKAILNDWKNFTALSPQEKEAKGSSTAYPWSAPNKCRATM 272
           HANCC+G+E KV DL+ +  DWKN+T+++P E+   G      W+AP +C A+M
Sbjct: 310 HANCCIGLENKVHDLRNVAADWKNYTSMAPPERTGGGRR----WTAPAQCEASM 359


>gb|EEC72055.1| hypothetical protein OsI_04965 [Oryza sativa Indica Group]
          Length = 385

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
 Frame = -3

Query: 433 HANCCVGIEKKVPDLKAILNDWKNFTA--LSPQEKEAKGSSTAYPWSAPNKCRATM 272
           HANCCVG+E KV DLK +L DWKN+TA   SP++K A      + W+ P KC+A++
Sbjct: 331 HANCCVGLENKVLDLKNVLADWKNYTAGLTSPEKKGA----NKFRWTFPVKCKASL 382


>ref|XP_003549184.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]
          Length = 353

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/51 (56%), Positives = 32/51 (62%)
 Frame = -3

Query: 433 HANCCVGIEKKVPDLKAILNDWKNFTALSPQEKEAKGSSTAYPWSAPNKCR 281
           HANCCVGIE KV DLK +L DWK + ALS  EK+    S    WS P  CR
Sbjct: 307 HANCCVGIENKVNDLKILLEDWKKYMALSEIEKKESHPS----WSVPQLCR 353


>ref|XP_002533447.1| conserved hypothetical protein [Ricinus communis]
           gi|223526696|gb|EEF28931.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = -3

Query: 433 HANCCVGIEKKVPDLKAILNDWKNFTALSPQEKEAKGSSTAYPWSAPNKCRATMITF 263
           HANCC G+E KV DLK +L DW+ F    P  K    +S+++ W AP+KC  + +TF
Sbjct: 111 HANCCFGLEHKVYDLKLVLEDWRRFMLSPPNVK----ASSSFSWRAPDKCSFSKMTF 163


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