BLASTX nr result

ID: Coptis25_contig00010260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010260
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274997.2| PREDICTED: TVP38/TMEM64 family membrane prot...   318   2e-84
ref|XP_004147957.1| PREDICTED: TVP38/TMEM64 family membrane prot...   290   5e-76
ref|XP_004172028.1| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64...   290   7e-76
ref|XP_003525557.1| PREDICTED: TVP38/TMEM64 family membrane prot...   288   2e-75
ref|XP_002509643.1| conserved hypothetical protein [Ricinus comm...   286   7e-75

>ref|XP_002274997.2| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
            vinifera] gi|297742653|emb|CBI34802.3| unnamed protein
            product [Vitis vinifera]
          Length = 293

 Score =  318 bits (816), Expect = 2e-84
 Identities = 157/290 (54%), Positives = 198/290 (68%)
 Frame = +3

Query: 318  DDDSVVPELKLKMDDGNGDYARLRNGNIYEVEEFGGVVTSSPRKVIPFWWWLKIVVLCIF 497
            DD  VVPEL L+M    GDY +LR     E E FG V  S+PR+    WWW K+ +LC+ 
Sbjct: 8    DDGGVVPELTLRM----GDYVKLRQPAECEEEGFGDVEPSTPRRRGLIWWWAKVALLCVV 63

Query: 498  GIALVVVIIIWVGPFILNKEVVPILDWEIATFSPQXXXXXXXXXXXXXXXXXXXXTPSIW 677
               L  V + WVGPF ++KE++PI++WE  TFS                      TPS+W
Sbjct: 64   LGVLAGVFLKWVGPFFMDKELMPIINWETTTFSTPVLALVIFGSVALFPTLLLPSTPSMW 123

Query: 678  VGGISFGYGYGFLLILPGMTVGMSLPYFIGSLFRHKLQTWCEKWPEKAAFMRLAGEGDWF 857
            V G++FGYG GFLLI+ G+ VG+SLPY IGSLF HK+Q W EK+P+KA+ +RLAGEG+WF
Sbjct: 124  VAGMTFGYGLGFLLIIAGVAVGVSLPYIIGSLFHHKIQGWLEKYPKKASIIRLAGEGNWF 183

Query: 858  HQFRAVLLLRISPFPFIIYNYAAVATNVKFGPYILGSIIGVVPEIFVAIYSGILIRKLAD 1037
            HQFRAV L+R+SPFP+I++NY +VATNVK+GPYI+GS+IGVVPEIFVAIY+GILIR LAD
Sbjct: 184  HQFRAVTLIRVSPFPYILFNYCSVATNVKYGPYIMGSLIGVVPEIFVAIYTGILIRALAD 243

Query: 1038 ASQGHYSLSTQQILYNGLGFCXXXXXXXXXXXXXKRALKKLQTEEELVLE 1187
            AS   +SLS  Q++ N +GFC             KR LK LQ EEEL+LE
Sbjct: 244  ASHEQHSLSASQVILNVVGFCATVATTIFFTVYSKRQLKALQKEEELLLE 293


>ref|XP_004147957.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis
            sativus]
          Length = 310

 Score =  290 bits (743), Expect = 5e-76
 Identities = 142/280 (50%), Positives = 189/280 (67%), Gaps = 4/280 (1%)
 Frame = +3

Query: 360  DGNGDYARLRNGNI---YEVEEFGGVVTSSP-RKVIPFWWWLKIVVLCIFGIALVVVIII 527
            D NGDY RLR       +EV   GG  +S P       W W+++VVL +F ++L VV   
Sbjct: 31   DHNGDYVRLRQSPCDCQHEVSSEGGDSSSQPCSPARSLWLWVRLVVLFVFLVSLAVVFFK 90

Query: 528  WVGPFILNKEVVPILDWEIATFSPQXXXXXXXXXXXXXXXXXXXXTPSIWVGGISFGYGY 707
            WVGPF +NKE++PI++WE  TFS                      +PS+W+ G++FGYG+
Sbjct: 91   WVGPFFMNKEIIPIINWEAETFSTPVLAVFVFASVALFPSLLLPSSPSMWLAGMTFGYGF 150

Query: 708  GFLLILPGMTVGMSLPYFIGSLFRHKLQTWCEKWPEKAAFMRLAGEGDWFHQFRAVLLLR 887
            GFLLI+  +T+G+SLPYFIGSLF  K+Q W EK+P++A+ +RLAGEG+W HQFRAV L+R
Sbjct: 151  GFLLIISAVTIGVSLPYFIGSLFYRKIQGWLEKYPKRASVLRLAGEGNWTHQFRAVALIR 210

Query: 888  ISPFPFIIYNYAAVATNVKFGPYILGSIIGVVPEIFVAIYSGILIRKLADASQGHYSLST 1067
            ISPFP+IIYNY AVATNV++GPYILGS++G+VPEIFV IY+GILIR LADASQ    LS 
Sbjct: 211  ISPFPYIIYNYCAVATNVRYGPYILGSLVGMVPEIFVTIYTGILIRTLADASQNQQFLSA 270

Query: 1068 QQILYNGLGFCXXXXXXXXXXXXXKRALKKLQTEEELVLE 1187
             QI++  +GFC             KR LK+LQ +++ +L+
Sbjct: 271  PQIVFTVIGFCVTAATTVFFTVYAKRKLKELQIDDDQLLQ 310


>ref|XP_004172028.1| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane protein
            slr0305-like [Cucumis sativus]
          Length = 310

 Score =  290 bits (742), Expect = 7e-76
 Identities = 142/280 (50%), Positives = 189/280 (67%), Gaps = 4/280 (1%)
 Frame = +3

Query: 360  DGNGDYARLRNGNI---YEVEEFGGVVTSSP-RKVIPFWWWLKIVVLCIFGIALVVVIII 527
            D NGDY RLR       +EV   GG  +S P       W W+++VVL +F ++L VV   
Sbjct: 31   DHNGDYVRLRQSPCDCQHEVSSEGGDSSSQPCSPARSLWLWVRLVVLFVFLVSLAVVXFK 90

Query: 528  WVGPFILNKEVVPILDWEIATFSPQXXXXXXXXXXXXXXXXXXXXTPSIWVGGISFGYGY 707
            WVGPF +NKE++PI++WE  TFS                      +PS+W+ G++FGYG+
Sbjct: 91   WVGPFFMNKEIIPIINWEAETFSTPVLAVFVFASVALFPSLLLPSSPSMWLAGMTFGYGF 150

Query: 708  GFLLILPGMTVGMSLPYFIGSLFRHKLQTWCEKWPEKAAFMRLAGEGDWFHQFRAVLLLR 887
            GFLLI+  +T+G+SLPYFIGSLF  K+Q W EK+P++A+ +RLAGEG+W HQFRAV L+R
Sbjct: 151  GFLLIISAVTIGVSLPYFIGSLFYRKIQGWLEKYPKRASVLRLAGEGNWTHQFRAVALIR 210

Query: 888  ISPFPFIIYNYAAVATNVKFGPYILGSIIGVVPEIFVAIYSGILIRKLADASQGHYSLST 1067
            ISPFP+IIYNY AVATNV++GPYILGS++G+VPEIFV IY+GILIR LADASQ    LS 
Sbjct: 211  ISPFPYIIYNYCAVATNVRYGPYILGSLVGMVPEIFVTIYTGILIRTLADASQNQQFLSA 270

Query: 1068 QQILYNGLGFCXXXXXXXXXXXXXKRALKKLQTEEELVLE 1187
             QI++  +GFC             KR LK+LQ +++ +L+
Sbjct: 271  PQIVFTVIGFCVTAATTVFFTVYAKRKLKELQIDDDQLLQ 310


>ref|XP_003525557.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine
            max]
          Length = 302

 Score =  288 bits (738), Expect = 2e-75
 Identities = 143/302 (47%), Positives = 194/302 (64%), Gaps = 8/302 (2%)
 Frame = +3

Query: 306  MTYKDDDS------VVPE--LKLKMDDGNGDYARLRNGNIYEVEEFGGVVTSSPRKVIPF 461
            MTY ++D       VVP+  L ++ DD NGDY +LR  N            S P      
Sbjct: 1    MTYYENDGGGRREEVVPDVTLTIQSDDSNGDYVKLRANNNDGSPPGAAAEPSPPTIRAAV 60

Query: 462  WWWLKIVVLCIFGIALVVVIIIWVGPFILNKEVVPILDWEIATFSPQXXXXXXXXXXXXX 641
            W+W+K+VVL +F   L VV+++WVGP+ ++KE++PI++WE  TFS               
Sbjct: 61   WYWVKLVVLFLFLGFLAVVVLVWVGPYFIDKEIIPIINWETETFSTPVLTVLVFTSVAVF 120

Query: 642  XXXXXXXTPSIWVGGISFGYGYGFLLILPGMTVGMSLPYFIGSLFRHKLQTWCEKWPEKA 821
                   TPS+WV G++FGYG+GFLLI+    +G+SLP+ IG LF HK++ W EK+P+KA
Sbjct: 121  PTLLLPSTPSMWVAGMTFGYGFGFLLIISAAAIGVSLPFVIGKLFHHKIEGWLEKYPKKA 180

Query: 822  AFMRLAGEGDWFHQFRAVLLLRISPFPFIIYNYAAVATNVKFGPYILGSIIGVVPEIFVA 1001
            + +R AG G WFHQFRAV  +RISPFP++I+NY AVATNVK+GPY++GS++G+VPEIFVA
Sbjct: 181  SILRSAGGGSWFHQFRAVAFIRISPFPYLIFNYCAVATNVKYGPYMVGSLVGMVPEIFVA 240

Query: 1002 IYSGILIRKLADASQGHYSLSTQQILYNGLGFCXXXXXXXXXXXXXKRALKKLQTEEELV 1181
            IY+GILIR LADAS   +SLS  QI+ N  GFC             +R L +LQ EEE +
Sbjct: 241  IYTGILIRTLADASHEKHSLSAPQIILNVAGFCITVATTIFFTAYARRRLDELQREEEPL 300

Query: 1182 LE 1187
            L+
Sbjct: 301  LQ 302


>ref|XP_002509643.1| conserved hypothetical protein [Ricinus communis]
            gi|223549542|gb|EEF51030.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 306

 Score =  286 bits (733), Expect = 7e-75
 Identities = 150/306 (49%), Positives = 193/306 (63%), Gaps = 15/306 (4%)
 Frame = +3

Query: 306  MTYK---DDDSVVPELKLKMDDGN-------GDYARLRNGNIYEVEEFGGVVTSSPRKVI 455
            MTY    DDD  VP L+   + GN       GDY +L +  + E E   GV+  S   + 
Sbjct: 1    MTYNNNNDDDDGVPHLRTTTETGNHDEDNIKGDYVKLGDCEVEE-ERLVGVIEGSSFCLW 59

Query: 456  PF-----WWWLKIVVLCIFGIALVVVIIIWVGPFILNKEVVPILDWEIATFSPQXXXXXX 620
             +     W+W K+ +L      L  V + WVGPF ++KE++PI++WE  TFS        
Sbjct: 60   KWRGSVVWYWFKLALLFTCLGLLAAVFLKWVGPFFMDKELIPIINWETTTFSTPVLAILV 119

Query: 621  XXXXXXXXXXXXXXTPSIWVGGISFGYGYGFLLILPGMTVGMSLPYFIGSLFRHKLQTWC 800
                          TPS+WV G++FGYG+GFLLI+    VG+SLPYFIGSLF HK+Q W 
Sbjct: 120  FASVALFPSILLPSTPSMWVAGLTFGYGFGFLLIISASAVGVSLPYFIGSLFLHKIQGWL 179

Query: 801  EKWPEKAAFMRLAGEGDWFHQFRAVLLLRISPFPFIIYNYAAVATNVKFGPYILGSIIGV 980
            EK+P+KAA +R AGEG+WFHQFRAV+ +RISPFP+I+YNY AVATNVK+GPYILGS+IG+
Sbjct: 180  EKYPKKAAILRAAGEGNWFHQFRAVMFIRISPFPYILYNYCAVATNVKYGPYILGSLIGM 239

Query: 981  VPEIFVAIYSGILIRKLADASQGHYSLSTQQILYNGLGFCXXXXXXXXXXXXXKRALKKL 1160
            VPEIFVAIY+G+LI  LADAS   +SLS  QI++N +GFC             KR LK L
Sbjct: 240  VPEIFVAIYTGMLIGTLADASNDRHSLSAPQIVFNVIGFCATVAATIIFTAYAKRKLKVL 299

Query: 1161 QTEEEL 1178
            Q E +L
Sbjct: 300  QDEPQL 305


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