BLASTX nr result
ID: Coptis25_contig00010249
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010249 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis... 82 6e-17 emb|CBI29531.3| unnamed protein product [Vitis vinifera] 82 6e-17 ref|XP_002534264.1| microtubule associated protein xmap215, puta... 80 6e-16 gb|AFW84772.1| hypothetical protein ZEAMMB73_280693 [Zea mays] 79 1e-15 tpg|DAA57118.1| TPA: hypothetical protein ZEAMMB73_106408 [Zea m... 79 1e-15 >ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera] Length = 1007 Score = 82.0 bits (201), Expect(2) = 6e-17 Identities = 38/46 (82%), Positives = 42/46 (91%) Frame = +3 Query: 3 AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140 AIKGHLSMVP DMEPQPI+LAYIDLNL+TLA+ MLTP+ PVGQTH Sbjct: 695 AIKGHLSMVPIDMEPQPIILAYIDLNLQTLAAARMLTPSGPVGQTH 740 Score = 30.0 bits (66), Expect(2) = 6e-17 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +1 Query: 145 GDSANTSPSPAKHFAYAQLKQ 207 GDS +PSPA H A AQLKQ Sbjct: 742 GDSGANNPSPATHSADAQLKQ 762 >emb|CBI29531.3| unnamed protein product [Vitis vinifera] Length = 991 Score = 82.0 bits (201), Expect(2) = 6e-17 Identities = 38/46 (82%), Positives = 42/46 (91%) Frame = +3 Query: 3 AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140 AIKGHLSMVP DMEPQPI+LAYIDLNL+TLA+ MLTP+ PVGQTH Sbjct: 679 AIKGHLSMVPIDMEPQPIILAYIDLNLQTLAAARMLTPSGPVGQTH 724 Score = 30.0 bits (66), Expect(2) = 6e-17 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +1 Query: 145 GDSANTSPSPAKHFAYAQLKQ 207 GDS +PSPA H A AQLKQ Sbjct: 726 GDSGANNPSPATHSADAQLKQ 746 >ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis] gi|223525620|gb|EEF28119.1| microtubule associated protein xmap215, putative [Ricinus communis] Length = 1992 Score = 80.1 bits (196), Expect(2) = 6e-16 Identities = 38/46 (82%), Positives = 41/46 (89%) Frame = +3 Query: 3 AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140 AIKGHLSMVP DM+PQPI+LAYIDLNLETLA+ MLT T PVGQTH Sbjct: 1685 AIKGHLSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTGPVGQTH 1730 Score = 28.5 bits (62), Expect(2) = 6e-16 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +1 Query: 145 GDSANTSPSPAKHFAYAQLKQ 207 GDSA +PS A H A AQLKQ Sbjct: 1732 GDSAANNPSSATHSADAQLKQ 1752 >gb|AFW84772.1| hypothetical protein ZEAMMB73_280693 [Zea mays] Length = 1996 Score = 78.6 bits (192), Expect(2) = 1e-15 Identities = 36/46 (78%), Positives = 41/46 (89%) Frame = +3 Query: 3 AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140 AIKGHLSMVP D EPQPI+LAYIDLNL+TLA+ MLTP+ P+GQTH Sbjct: 1719 AIKGHLSMVPIDAEPQPIILAYIDLNLQTLAAARMLTPSGPMGQTH 1764 Score = 29.3 bits (64), Expect(2) = 1e-15 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 145 GDSANTSPSPAKHFAYAQLKQ 207 GD+A+ +P+P+ H A AQLKQ Sbjct: 1766 GDAASNNPNPSTHSADAQLKQ 1786 >tpg|DAA57118.1| TPA: hypothetical protein ZEAMMB73_106408 [Zea mays] Length = 1293 Score = 78.6 bits (192), Expect(2) = 1e-15 Identities = 36/46 (78%), Positives = 41/46 (89%) Frame = +3 Query: 3 AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140 AIKGHLSMVP D EPQPI+LAYIDLNL+TLA+ MLTP+ P+GQTH Sbjct: 1015 AIKGHLSMVPIDAEPQPIILAYIDLNLQTLAAARMLTPSGPMGQTH 1060 Score = 29.3 bits (64), Expect(2) = 1e-15 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 145 GDSANTSPSPAKHFAYAQLKQ 207 GD+A+ +P+P+ H A AQLKQ Sbjct: 1062 GDAASNNPNPSTHSADAQLKQ 1082