BLASTX nr result

ID: Coptis25_contig00010249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010249
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis...    82   6e-17
emb|CBI29531.3| unnamed protein product [Vitis vinifera]               82   6e-17
ref|XP_002534264.1| microtubule associated protein xmap215, puta...    80   6e-16
gb|AFW84772.1| hypothetical protein ZEAMMB73_280693 [Zea mays]         79   1e-15
tpg|DAA57118.1| TPA: hypothetical protein ZEAMMB73_106408 [Zea m...    79   1e-15

>ref|XP_002271272.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera]
          Length = 1007

 Score = 82.0 bits (201), Expect(2) = 6e-17
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140
           AIKGHLSMVP DMEPQPI+LAYIDLNL+TLA+  MLTP+ PVGQTH
Sbjct: 695 AIKGHLSMVPIDMEPQPIILAYIDLNLQTLAAARMLTPSGPVGQTH 740



 Score = 30.0 bits (66), Expect(2) = 6e-17
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +1

Query: 145 GDSANTSPSPAKHFAYAQLKQ 207
           GDS   +PSPA H A AQLKQ
Sbjct: 742 GDSGANNPSPATHSADAQLKQ 762


>emb|CBI29531.3| unnamed protein product [Vitis vinifera]
          Length = 991

 Score = 82.0 bits (201), Expect(2) = 6e-17
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140
           AIKGHLSMVP DMEPQPI+LAYIDLNL+TLA+  MLTP+ PVGQTH
Sbjct: 679 AIKGHLSMVPIDMEPQPIILAYIDLNLQTLAAARMLTPSGPVGQTH 724



 Score = 30.0 bits (66), Expect(2) = 6e-17
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +1

Query: 145 GDSANTSPSPAKHFAYAQLKQ 207
           GDS   +PSPA H A AQLKQ
Sbjct: 726 GDSGANNPSPATHSADAQLKQ 746


>ref|XP_002534264.1| microtubule associated protein xmap215, putative [Ricinus communis]
            gi|223525620|gb|EEF28119.1| microtubule associated
            protein xmap215, putative [Ricinus communis]
          Length = 1992

 Score = 80.1 bits (196), Expect(2) = 6e-16
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +3

Query: 3    AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140
            AIKGHLSMVP DM+PQPI+LAYIDLNLETLA+  MLT T PVGQTH
Sbjct: 1685 AIKGHLSMVPIDMKPQPIILAYIDLNLETLAAARMLTSTGPVGQTH 1730



 Score = 28.5 bits (62), Expect(2) = 6e-16
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +1

Query: 145  GDSANTSPSPAKHFAYAQLKQ 207
            GDSA  +PS A H A AQLKQ
Sbjct: 1732 GDSAANNPSSATHSADAQLKQ 1752


>gb|AFW84772.1| hypothetical protein ZEAMMB73_280693 [Zea mays]
          Length = 1996

 Score = 78.6 bits (192), Expect(2) = 1e-15
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +3

Query: 3    AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140
            AIKGHLSMVP D EPQPI+LAYIDLNL+TLA+  MLTP+ P+GQTH
Sbjct: 1719 AIKGHLSMVPIDAEPQPIILAYIDLNLQTLAAARMLTPSGPMGQTH 1764



 Score = 29.3 bits (64), Expect(2) = 1e-15
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +1

Query: 145  GDSANTSPSPAKHFAYAQLKQ 207
            GD+A+ +P+P+ H A AQLKQ
Sbjct: 1766 GDAASNNPNPSTHSADAQLKQ 1786


>tpg|DAA57118.1| TPA: hypothetical protein ZEAMMB73_106408 [Zea mays]
          Length = 1293

 Score = 78.6 bits (192), Expect(2) = 1e-15
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +3

Query: 3    AIKGHLSMVPTDMEPQPIVLAYIDLNLETLASTGMLTPTDPVGQTH 140
            AIKGHLSMVP D EPQPI+LAYIDLNL+TLA+  MLTP+ P+GQTH
Sbjct: 1015 AIKGHLSMVPIDAEPQPIILAYIDLNLQTLAAARMLTPSGPMGQTH 1060



 Score = 29.3 bits (64), Expect(2) = 1e-15
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +1

Query: 145  GDSANTSPSPAKHFAYAQLKQ 207
            GD+A+ +P+P+ H A AQLKQ
Sbjct: 1062 GDAASNNPNPSTHSADAQLKQ 1082


Top